Reinekea forsetii: REIFOR_00950
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Entry
REIFOR_00950 CDS
T05208
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03030
DNA replication
rfo03430
Mismatch repair
rfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
REIFOR_00950
03430 Mismatch repair
REIFOR_00950
03440 Homologous recombination
REIFOR_00950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfo03032
]
REIFOR_00950
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_00950
Enzymes [BR:
rfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
REIFOR_00950
DNA replication proteins [BR:
rfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
REIFOR_00950
DNA repair and recombination proteins [BR:
rfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
REIFOR_00950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
ABM
Motif
Other DBs
NCBI-ProteinID:
ATX76117
UniProt:
A0A2K8KMP6
LinkDB
All DBs
Position
1033153..1036659
Genome browser
AA seq
1168 aa
AA seq
DB search
MANFVHLRVHTEYSLSDGIVRIKKLIEKIGESQMPAVAITDISNFFGLIKFYNQALAAGI
KPILGADLWIENEQDDADPFLMTVLACTNQGYRNLTELMSDGYQSNQRKGRPQVKADWLH
AKQAGLILLSGARNGDVGQALLRGKAEQAESCAQRWQASFGDRYYLELQRTRRDQDEALV
QGSLLLARKHGIPVVATNAVMFIARDDFEAHETRVCINEGVTLDDPKRNKHYSEEQYLKS
ADEMTALFVDIPEALDNSLLVAQRCSAQIELGKYYLPDYPVPAGKTMDEYFRELSAGGLE
KRLAVVLKPDQLDFQERRQDYYDRLEFELNIIIQMGFPGYFLIVMDFIRWGKNNGVPVGP
GRGSGAGSLVAWVLDITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDGRERVIQYVAD
TYGRQAVSQIVTFGTMAAKAVVRDVARVQGKPFGLADRLSKLIPPDPGMKLSRARDEVAE
LKEFLESDEEGLEIWEMALKLEGITRQTGKHAGGVVIAPTKLTDFSPLLCDEDGTGLVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKIVNPRRLALNLPAIDIADIPLNDEAAFVLL
QKSHTTAVFQLESRGMKDLVTRLKPDCLEDMIALVALFRPGPLQSGMVDNFINRKHGREE
LSYPDVQYQHELLKPILAPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPEEM
AKQRDSFEQGAINNGIDGHLAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
AFMAATLSSELQNTDKVVIFVEECRQLAIDVLPPDVNAGDFAFTVNAQDQIIYGLGAIKG
VGEGPVEAIVAAREQGGDFKNLFDFCARVDTKKLNKRAIDALIRAGAMDTIGPHRNVMLA
AMLDAVKVAEKSAANAAARMEDMFGLIEAEVEVDVYALYAQVPEAALKERLAGEKETLGL
YLTGHPIDEFEAEVQQVVSMRLGDLDGSVEELKRSRRGNIKTFAGLVMGVRTRQTQRGET
MAIVTLDDRTGRLEMTLFGEAYAEFKHLMIVDTVVVVEAEAGWDDYNDRPRIRAQKVYTL
VEARQALIKGVEFKVEAAQAQAFLAKLKALVRSDLPEDRGCKVWIRYTNDLAQGEVMLHE
RYRIPLEDETLHTLRQSFGETGYKFRYQ
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattttgttcacctacgcgttcacaccgaatattctctcagcgatggcatcgtc
cggattaagaagctgattgaaaaaattggtgagagtcagatgccggctgtggccatcacc
gatatcagcaacttcttcggtctgattaaattttacaatcaggccttagcagccggtatt
aaaccgattctcggtgccgatctgtggattgagaatgagcaagacgacgccgatccgttc
ttaatgacggtattggcctgcaccaaccagggttaccgcaatcttaccgaactgatgtct
gacggctatcaatccaatcaacgcaaaggccggcctcaggtcaaggctgattggctacac
gctaaacaggccggactaatactgttgtcgggcgcccgtaacggtgacgtcggtcaggca
ctgctgcgcggtaaggccgagcaggcggaaagttgcgcccagcgttggcaggcaagcttt
ggcgaccgttattatttggaattgcagcgcactcggcgcgaccaagacgaggcgttggtg
cagggcagtttgttactggctcgcaagcatggcatacccgtggtcgctaccaatgcggtg
atgtttattgcgcgtgatgactttgaagcccatgaaaccagggtgtgcattaacgaaggg
gtgacgctggacgacccgaaacgcaataagcactattctgaagagcagtatctaaaatct
gcagacgagatgacggcgttgtttgtcgatatacccgaggctctcgacaacagtctgctg
gtcgcgcagcgctgttcggcgcagatcgaactgggcaaatattatctgcccgattacccg
gtacccgccggtaagaccatggatgaatacttccgcgagttgtccgccggtggtctagaa
aaacgcttagccgtggtgcttaaacccgatcagctcgattttcaagaacgccggcaagac
tattacgatcggctcgagttcgaactcaatatcatcatccaaatgggttttccgggttat
ttcttgatcgtcatggactttatccgctggggtaaaaacaatggcgtcccggttggaccg
ggtcgtggatcgggcgcggggtcattggtggcctgggtgctcgacattaccgacctggat
ccattggaatacgatctgctgttcgaacgtttcctgaacccggagcgggtgtcgatgccc
gactttgatatcgacttctgtatggatgggcgcgagcgtgtcattcaatatgtcgccgat
acctatggccggcaggcggtatcgcagattgtcaccttcggcaccatggcggccaaggcg
gtggtgcgggatgtggcgcgggtccaggggaagccctttggtctggccgatcgactgtcc
aagttgattccgcccgatccgggcatgaagttgagtcgagcccgagacgaggtcgccgag
ctaaaagagttcctcgagtccgatgaagagggcttggaaatttgggagatggcgctgaaa
ctcgagggcatcacccggcaaaccggcaagcatgccggtggtgtggtgatcgcgccaacc
aaactgaccgacttttcgccactattgtgcgatgaagacggtaccggactggtgacccag
ttcgataagaacgatgtcgagtacgccggtctggtgaagtttgactttctcgggttgcgc
acgctaaccatcatcgattgggcgctgaaaatcgtcaatccacgccgtttggcgctgaat
ttgcccgcgatcgatatagccgatattccgcttaacgatgaagcggcctttgtcttgttg
cagaaatcgcacaccacggccgtatttcaacttgagtcacgcggcatgaaagatctggtc
acccggctgaagcccgactgcctggaagatatgatcgccctagtggccttgtttcgtccg
ggtccgctgcagtctggcatggtcgacaactttatcaatcgtaaacacggtcgcgaagag
ttgtcttatccggatgtgcagtaccagcacgaactgcttaaaccgatcctagcgccgacc
tatggcattattctctatcaggaacaggtgatgcagatcgcccaggtcctagccggctat
accctgggcggtgccgatatgttgcgccgcgccatgggcaagaaaaacccagaggagatg
gccaaacaacgcgacagctttgaacagggcgcgatcaataacggtatcgatggccacctc
gctattaagatttttgacctggtggagaaatttgccggttatggctttaacaagtcgcac
tctgccgcctatgccttggtgtcctatcagacgctctggctgaaaacccattatccagcc
gcctttatggcggcgaccctgtcgtctgaactgcaaaacaccgacaaggtggtgatcttc
gttgaagagtgtcgtcaactggcgatcgatgtcttaccaccggatgttaacgccggtgac
tttgcctttaccgttaatgcgcaagatcagatcatctatggcttgggtgccatcaagggg
gtcggcgaaggtccggtcgaagcgatcgttgccgcgcgtgagcagggtggtgatttcaaa
aacctatttgatttttgcgcccgggttgacactaagaagctcaataaacgcgccattgac
gctctgattcgggccggcgcgatggacaccatcggcccgcaccgcaatgttatgctcgcc
gcgatgctcgatgccgtgaaggtcgccgagaagtccgccgccaacgcagcagcgcgtatg
gaagatatgttcggcctgattgaggccgaggtcgaagttgacgtctatgcgctctatgcc
caggtgccggaggccgcactaaaagagcgcttggcgggtgaaaaagagaccttggggcta
tatctgacgggccatccgatcgatgaatttgaagccgaagtgcagcaagtggtgtcgatg
cgcttaggcgatctggatggctcggttgaagaactgaagcggtcgcggcgcggcaatatc
aagacctttgccggtttggtgatgggggtccgtacccggcaaacgcaacgtggcgaaacc
atggccatcgtcacgctcgatgaccgcaccggccgactggagatgaccctctttggtgag
gcctatgccgaatttaagcacctgatgatcgtcgatacggtcgtcgtggtcgaagccgag
gccggttgggacgattacaacgatcggccgcgcattcgcgcgcagaaggtctatacccta
gtagaggctcggcaggccctgatcaagggggttgaatttaaggttgaggctgcgcaggct
caagccttcctggccaaactcaaggcgttggtacgctctgatcttcccgaggatcgtggc
tgtaaggtctggatccgttataccaatgacttggcccaaggcgaagtgatgcttcacgag
cgctatcggatcccactggaggatgagactttacataccctgaggcagtcctttggcgaa
acgggctataagtttcgctatcaatag
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