Reinekea forsetii: REIFOR_01057
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Entry
REIFOR_01057 CDS
T05208
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
REIFOR_01057 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfo03019
]
REIFOR_01057 (rhlB)
Enzymes [BR:
rfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
REIFOR_01057 (rhlB)
Messenger RNA biogenesis [BR:
rfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
REIFOR_01057 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Helicase_RecD
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ATX76210
UniProt:
A0A2K8KMZ8
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All DBs
Position
1129343..1130854
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AA seq
503 aa
AA seq
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MTNQNKRYRRPRWHIAQFKVEEAAGKVRFHDLFLPIALMRAIQEVGYQYCSPIQAMTLPY
ALAGFDCIGKAQTGTGKTAAFLITAITDLLEHRLEEQYLGEPRALILAPTRELALQIAED
AQQLTKYSRLKVVAVVGGMDFEKQQKQLAEQRVDIMVATPGRLIDFMNRKLVFLDQIELL
VIDEADRMLDMGFIPDIKTIVRATPRTENRQTLMFSATFSQDILNLAERWTNEPVQVEVE
PLTKTSDDVEQHVYIISADEKYQVLRRILRRPEADRVLVFANRKDIVRDLSENLKKDGIE
CEVLSGDVPQNKRIRTLDGFKEGKFEVLVATDVAGRGIHIDGVSHVINYTLPEDAEDYVH
RIGRTGRAGKKGVSISFACEDDSFLIPAIEEYVKAKIDVEMLPEHLRTDEIVDAAVEVDS
NVDSALEEDSPSVTPVQTKVEDLDDEDDDSHKPVGEVTAVNVDQTEAGPEITVDVDFNDP
DDEDDFDGDNIGNVAIEADAPKS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaccaaaataaacgttaccgtcgtccaagatggcacattgctcaatttaaagtt
gaagaagctgccggaaaagtaagatttcatgacctctttttacccatcgccctgatgcgg
gcaatccaagaagtgggttaccaatactgtagtccaatccaagccatgaccctgccttac
gctttggccggttttgattgcatcggtaaagcccagacgggaacgggcaagaccgccgcc
ttcctgatcacggccattactgacttattggagcaccgtctggaagagcaatatctgggt
gagccccgtgccttgattttagcgccaacccgcgagctggccctgcaaatagcagaagac
gcccagcagctgaccaaatacagccgactgaaagttgttgctgtggtcggtggaatggat
ttcgagaagcagcagaagcagttggctgaacagcgtgtcgatatcatggtagccacgccc
ggtcggttgatcgatttcatgaaccgaaagctggtgttcttagatcagatcgagttgctg
gtgatcgatgaagccgaccgtatgttggacatgggttttatccccgatattaagaccatt
gttcgggccacaccgcgcactgagaatcgtcagacgctgatgttttcggccaccttctcc
caggatattttgaacctggctgaacgttggactaatgagccggtgcaggttgaagttgaa
cccttaaccaagacctctgatgatgtagagcagcatgtctatattatttccgccgatgag
aaataccaggtgttacggcgcattttacgccgcccggaagccgaccgagtgttggtcttc
gccaatcgcaaagatatagtgcgcgatctgtctgaaaatcttaagaaagacggtatcgag
tgtgaagtattgtccggtgatgtcccgcagaataagcggatacgcaccctggacggcttt
aaagaaggtaagttcgaagtcctggtcgcaaccgatgttgctggtcgtggcattcatatc
gatggcgtgtcgcacgtgattaactacactctgccggaagatgccgaagactacgtacac
cgcattggccgcaccggtcgtgccggtaagaagggcgtatcgatcagctttgcctgtgaa
gacgattcgtttctgattccagccatcgaagagtacgtcaaggctaaaatcgatgtcgaa
atgctgccagaacatctgcgcacggatgagattgttgacgccgccgttgaggtagatagc
aacgtcgacagcgcgcttgaagaagattcgccaagtgtcacgccggtgcagaccaaggtt
gaagacctagacgatgaagacgacgacagtcacaagccggttggtgaagtaactgcggtg
aatgttgatcagactgaggcgggcccggaaattaccgtcgatgtcgacttcaatgatccg
gatgacgaagatgactttgacggtgataacattggcaatgttgccatcgaagccgacgcg
ccaaagagctaa
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