Reinekea forsetii: REIFOR_01280
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Entry
REIFOR_01280 CDS
T05208
Name
(GenBank) type IV secretion protein Rhs
Organism
rfo
Reinekea forsetii
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
ATX76426
UniProt:
A0A2K8KU56
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Position
1377566..1381264
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AA seq
1232 aa
AA seq
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MNYRKGVTLRVSSLALAVILAIGAGPMAFAGRSTDYTYNELGQMTSIDGPRTDVADITYY
HYEIATANLLSTTNAAGHTTTYSNYTRGGLAQTITTPNGAQIHLQYRFDGKVLQQDVVTQ
EGTQTTKYTYDAAVNLTKVQLPDGHSLTYVYDRGQRLIGIENDLGERIDYQLDSAGNITE
QTVRNSSGSIVRQHQQVFDDLSRVRQVVGGTDGQTTERGYDADSRLTQIIDAKNNPPTQN
TYDSLNRLTRMVDSANGVTSLTYNAHGLIATVTDPRGLVTRYDYNGYGELAAINSPDTGI
TTFETDNNGNVTQRIDARGTEVQFSYDALDRLTEQRYPADATKNILFEYDDTGTGPNGQT
NYGLGQLTRITYYGGQIDYQFDQLGRLVAEQRSIGGQSYLTEYRFNTVGQLSELVYPSGR
IVHYSYGSQGRLNRLTTQEHNTAPDQILVDNLDYLPFGPVTGFDYGNGITQSYTFDLDYR
LTGLTSAVQDWVYRYDLNSNIEQILDSQDSTHDQVYQYDALNRLIAADGPYGDYRYQYDP
VGNRTERQKIWLETTELEAYQYTAEANQLNQVDSTETNNGNTTQTDSRLFAYSETGQLLL
DINNDRTLDLHYDENDRLAQADVYGAALKTTTYQYNPLGQRIVQSQNGKTQHIHYNAQGQ
RLAESDANGDLIREYLYLGNQPIAMVVANAGTEANQASTPVEPWILDSEAANTRITGVWR
VSSHYPGYQGTGYRFSPANQSITSSNTIDTDQATLVGTWHTSTATPGYIGPNYRYAAKGD
GTTSATWPVAANGNKDLWVIYTSGSNRASNATYTVHHANGQTNVTVDQSQNGGTWALLGN
FNLDANSKVVLTNLANSYVIADGIRIGDDSNNPEYASVTWLITVPQTGRYKVYGTWNSGS
SRASNAKYTINAGPNQHTSIQNQRLNGGQWNLLGEYSFDIADNANGQNNVSLSAEANGYL
IADAIKLELIEDNQPTPIGLFFIHNDHLGTPKRLTDTQGEVVWSLQTTPFGEIHEEIANG
ITLLNGFPGQYRDSETGLSYNYYRDYDPSIGRYIQSDPIRLGGGLNTYGYVGGNPLTFAD
PSGLVKWQGKTASVGASLIVGASIQAFTLTSECINGTQKKVGVWAFGPQVGAGLGIFPPT
GVTGGDFTIEDGHETPTPGVFNSGLFGFTAYSQGVSVGFAGYSNTIISFGNGITSVGYMD
ATAPGSVEFNFSTVMKGSSIISSIEELYCTCE
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaactatagaaaaggagtcacccttcgagtcagcagtctggccctagctgtaatactg
gccatcggtgctgggcctatggccttcgccggccgctcgaccgattacacctataatgaa
ctgggccagatgacctcgatcgacggtccacgcaccgatgtcgccgacattacctattac
cattacgagatcgccaccgccaacctgctcagcaccaccaatgccgccggccacaccacc
acctacagcaactatacccggggcggtttggcgcaaaccattaccacccccaatggcgcc
cagatccatctgcaatatcgcttcgatggcaaggtgctgcagcaagacgtggttacccaa
gagggtactcagacaacaaagtacacttacgatgccgcggtcaatctcaccaaggtacaa
ctgcccgacggccatagcctgacctatgtgtatgaccgcggccaacgcctaatcgggatc
gagaacgacctgggtgaacggatcgactaccagctggactcggccggtaacatcaccgaa
caaacggtgcgcaacagcagtggctcgattgtccggcagcaccagcaagtcttcgacgac
ctatcccgcgtgcgtcaagtggtcggtggcaccgatggccaaaccaccgaacggggatac
gatgccgacagccgcctaacccagatcatcgatgccaaaaacaatccaccgacccaaaat
acctacgactcgctcaatcgattaacgcggatggtcgacagcgccaacggcgtcaccagc
ctgacgtacaatgcccacggcctgatcgccacggtcaccgaccctcggggcttggtaact
cggtacgattacaatggctatggtgaactggctgccattaatagcccggataccggcatc
accacgttcgagaccgacaacaacggcaacgtgacccaacggatcgatgctcggggtaca
gaggtccagttcagttatgatgctctggaccgtctcaccgaacagcgctaccccgcagac
gcgactaagaatattctctttgaatacgatgacaccggcaccggccctaatggccaaacc
aactacggcctgggccaactgacccgaattacctactacggtgggcagatcgactatcag
tttgaccaactcgggcgtttggtggccgaacaacgcagcatcggtggtcaatcgtaccta
accgaataccgcttcaataccgtgggccagttgagtgaactcgtctatccctccggtcgg
atcgtgcattacagttatggcagccagggcagactcaatcgcctgactacccaggaacat
aacaccgcaccagaccagatcctggtcgataatctggactacctgccatttggcccggtc
accggttttgattacggcaatggtattacacagagctacacctttgatctggactatcgc
ctgaccggtctcaccagtgcggtacaagactgggtctaccggtacgacctcaacagcaat
atcgaacagatcctcgacagccaagacagcacccacgatcaggtgtaccaatacgatgct
ctaaatagactgattgcagccgatggcccctatggtgactatcgctatcaatacgacccc
gtgggtaaccgcacggaacggcaaaagatctggctggagacgaccgagttggaagcctac
caatacaccgctgaagccaatcaactgaaccaagttgacagcacagagaccaacaacggc
aacaccacccaaaccgacagtcgcctatttgcctacagcgagaccgggcaacttctactc
gacatcaacaacgaccgcaccctcgacttgcactacgacgagaacgaccgtttagctcag
gcagatgtctatggagccgcgcttaaaacgaccacctaccaatacaacccactgggccaa
cggattgtgcaaagccaaaacggcaaaacgcaacacatccattacaacgcccaaggtcag
cggcttgccgaaagcgatgccaatggcgacctaatccgggaatacctgtacctgggcaat
caaccgatagctatggtggttgccaatgctggtacagaggccaatcaggcaagcaccccg
gtggaaccctggatactcgacagcgaagccgccaacacccgaatcacgggtgtctggcgg
gtatcttcccattaccccggttaccaaggaaccgggtatcgcttcagcccggccaatcag
agtataaccagcagcaatacaatcgacacagaccaagcgacgttggtcggcacctggcat
acctcaaccgccacccccggctatatcggcccgaattaccgttatgctgctaagggcgac
ggcactacctcggccacctggccggtcgccgctaacggaaataaggatctgtgggtcatc
tacaccagcggcagtaaccgggccagtaacgccacctacacagtgcaccacgccaacggc
caaaccaatgtcacagtcgaccaaagccaaaacggtggaacctgggccttgctgggtaac
tttaatctggatgccaacagcaaggtggtcctcaccaatctagccaattcctacgttatc
gccgacggcatccggattggagacgacagcaacaaccccgaatacgccagcgtcacctgg
ctaatcaccgtgccccagacagggcgctataaagtctacggtacctggaacagcggcagc
agccgggcgagtaatgcgaaatacaccattaacgcgggaccaaaccagcacacctcaata
caaaaccaacggttaaacggcggccaatggaacctgctcggcgaatacagctttgatatc
gctgataacgcgaatggtcagaacaacgtaagcctatccgccgaagccaatggctatctg
attgcagatgctatcaagctggagctgattgaagacaatcagcccactccaattggcctg
ttcttcatccacaatgatcacctaggcacccccaaacggttaaccgatacccagggcgaa
gtcgtctggtcactgcaaacgaccccgttcggcgaaatccatgaagagattgccaacggc
atcacgttgttgaacggttttccgggccaatatcgtgacagcgaaacgggcttgagttac
aactactatcgggattacgatccgagtattgggcggtacatccagagtgacccgattagg
ttaggcggcgggctgaacacttatgggtatgttggggggaatccactaacctttgctgat
ccgtcaggcttagtgaaatggcaaggaaaaaccgcatctgtgggagcatccttaatcgta
ggagcttcaatacaagctttcacccttacttccgagtgtataaacgggacgcagaagaag
gttggagtttgggcatttgggccccaagttggcgctgggcttggtatttttcctcctact
ggcgttactggtggtgatttcacaatagaagatggccacgagactccaacacctggtgtg
tttaatagtggcctgtttggctttaccgcatattcgcagggagtgtcggttggcttcgct
gggtactccaacacaataataagtttcgggaatggcattacctcggttggatatatggat
gcaactgctcccgggtcagttgaatttaatttttccaccgtaatgaaaggtagttcaata
atctcttccattgaagagctttactgtacttgcgagtaa
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