Reinekea forsetii: REIFOR_02165
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Entry
REIFOR_02165 CDS
T05208
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
rfo
Reinekea forsetii
Pathway
rfo02020
Two-component system
rfo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
REIFOR_02165
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
REIFOR_02165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfo03021
]
REIFOR_02165
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rfo02035
]
REIFOR_02165
Transcription machinery [BR:
rfo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
REIFOR_02165
Bacterial motility proteins [BR:
rfo02035
]
Flagellar system
Flagellar assembly proteins
Stator
REIFOR_02165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ATX77299
UniProt:
A0A2K8KTA1
LinkDB
All DBs
Position
complement(2336325..2337062)
Genome browser
AA seq
245 aa
AA seq
DB search
MSVQNYTMYDTQRSIDYEQLVEQYGVLVKRIAHHLLARLPDSVQLDDLVQSGMIGLFEAA
NNYDAGKGASFETYAGIRIRGSMLDEIRKGDWIPRSVHRNSRRIADAIRVIEMREGRDAQ
DPEVALELGISLDEFYMLIKDTQGSRLFSFEELVENNHSETDEGRPDVSDTVAPHLGHQT
DQMNGRLITAIKALPEREQLVLSLYYDEELNLKEIGAVLGVSESRVSQIHSQATLRLRSK
LRDWL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcagaactatactatgtatgacacgcaacgcagtatcgattacgagcagtta
gtagaacagtatggggtgctggttaaacgcatcgcccatcatttattagcgcgactacca
gacagtgttcagttggacgatttagttcaatcgggcatgattggcttatttgaggcggcg
aataattacgatgcgggcaaaggggctagttttgagacctatgctgggattcgaattcgc
ggttccatgctcgatgaaatccgcaagggcgattggattccccgcagcgtgcaccgcaat
tcccggcgcatagccgatgcgattcgagtaatcgagatgcgtgagggccgcgatgcccaa
gatcccgaggtggccttagaactgggcatcagcctcgacgaattctatatgttgatcaaa
gatacccaagggtcacggttgttcagttttgaagagttggtcgagaataatcattcggaa
acggatgaaggccgaccggatgtatccgacaccgtagcaccccacctaggccaccagacc
gatcaaatgaacggtcgcttgatcactgccataaaagcgttaccagaacgtgaacagttg
gtcttatcgctctattacgacgaagaactgaacctcaaagaaataggcgccgtgttgggt
gtcagcgaatcccgagtcagtcagatccattcccaagcaactctgcgcttgcggtctaaa
ttgcgtgattggctgtaa
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