Reinekea forsetii: REIFOR_02580
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Entry
REIFOR_02580 CDS
T05208
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
REIFOR_02580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_02580
Enzymes [BR:
rfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
REIFOR_02580
DNA repair and recombination proteins [BR:
rfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
REIFOR_02580
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
REIFOR_02580
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
REIFOR_02580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
RNase_T
ExoI_C
Motif
Other DBs
NCBI-ProteinID:
ATX77704
UniProt:
A0A2K8KXD9
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All DBs
Position
2808546..2810111
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AA seq
521 aa
AA seq
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MQTPQSGDMTLLWYDYETWGANPQRDRLAQFAAVRTDLELNPIGSPIDLLCQPALDTLVD
ADAVAITGLSPLDLAARGLSEWDFAQQIHQHLSLSGTCSVGYNSIRFDDECTRYLLYRNM
LDPYAREWKNGNARWDLLDVVRMTHALRPDGINWPTRDDGTPSFKLEHLSAANGLAHAKA
HDAVSDVLATIALAKLIKQRQPKLYDYAFSLRSKHRVRQHIDIEGRQPHLHFSGKIPALE
HCMGIEIPLMMHPERNNEVIVIDIRNDPSWLLAHDAQTLKTWLYSKAADLPEGATRPPFK
TVHLNRSPMIASMTLLDAVTAERLDVDLVRIQVHQAIVEAHPELRALALAVFTEQDRREP
PADPEHALYSGFIDDHDRNLLNRMASDRIHKERWLDETHLLHDDRLPPLVESALARNFPS
ALSDAQFAGWKNSRLGVLEDPDRGQALSISSALERVAAKLLDSPEHAALLDTQAYLLQRQ
SYWFGAAPLATHKASVEDSAPPAESETDAPDSNLNDQMDLF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaccccaatcaggtgacatgaccctactatggtatgactacgaaacctggggt
gccaacccccagcgcgaccgcctggcgcaatttgccgcggtgcgcaccgatctggagctg
aatccgattggctcgcccatcgatctgctctgccaaccagcactcgacaccctggtggat
gccgatgcggtcgccattaccggtttatcgccactcgacttggccgcgcgtggcctgtca
gaatgggactttgcccaacagattcatcagcatttgtcgctctcgggcacctgttcggtg
ggctataacagtattcgctttgatgatgaatgtacccgctatttactctatcgcaatatg
ctcgacccctatgcacgtgaatggaagaacggtaatgcccgctgggatctgctcgatgta
gtgcgcatgacccatgcgttgcggcccgatggcatcaattggccgacgcgggacgacggc
acaccctccttcaagctcgagcacctgagcgcggccaacggcttggcgcatgccaaagca
cacgatgccgtcagcgatgtcttggcgaccatcgcgctggccaagttgatcaagcaacgc
caacccaagctatatgactatgcttttagcctgcgttccaaacatcgggttcgtcagcat
atcgatatagagggccggcaaccgcatctgcatttttccggcaagatcccggcgttggaa
cattgcatgggcattgaaatccccctaatgatgcacccggaacgcaataacgaggtgatc
gttatcgatatccgtaacgatcccagctggctactggcccacgacgcccaaacgctcaag
acctggctgtacagtaaggctgctgatctgcccgagggtgcgacccgaccgccgttcaaa
accgtgcacttgaaccgcagcccgatgatcgcatcgatgaccctgttagatgccgtcaca
gcagagcggctcgatgtcgacctggtccgcattcaggtacatcaggccatagtagaggct
catccggaattgcgtgcgctggcgctggccgtctttaccgaacaagaccgacgtgagccc
cctgctgaccctgaacatgcgctctattccggctttatcgacgatcacgatcgcaaccta
ttgaaccgaatggccagtgaccgcatccacaaagaacgctggctcgatgaaacccatctg
ctgcacgatgatcgcttaccacctttggtcgaaagcgcactggcgcggaacttcccatcg
gcgttgagcgatgcgcagtttgccgggtggaaaaacagccgcctcggcgtgcttgaggat
ccggaccgaggccaagccttaagcatctcgagcgcgctcgagcgcgtcgcggcaaagctg
ctagactcaccggagcacgccgccttactcgacacccaagcgtatttgctgcagcgccag
agctattggttcggggccgctcctctggcgactcataaagcgtccgttgaggactcggca
ccaccggccgaatcagaaacggacgcaccggacagcaaccttaatgatcaaatggactta
ttttag
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