Reinekea forsetii: REIFOR_02601
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Entry
REIFOR_02601 CDS
T05208
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
REIFOR_02601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfo03019
]
REIFOR_02601
Enzymes [BR:
rfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
REIFOR_02601
Messenger RNA biogenesis [BR:
rfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
REIFOR_02601
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ATX77725
UniProt:
A0A2K8KSL2
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All DBs
Position
2833623..2834963
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AA seq
446 aa
AA seq
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MVVKWIKRWFNQPVQNLNLVTVPRDQHQVSRKGISHNALKVLHRLHGAGHEAFLVGGCVR
DLQLGYAPKDFDVATNATPEDIRKIFSNSRIIGRRFRIVHVTYGREIIEVTTFRGKAEAS
GSDQKQSAEGMLLRDNVYGSLEDDAKRRDFTINAMYYTATNFSVLAYPQGMEDLNNKIIR
IIGDAETRYREDPVRMLRAIRFAAKLGFSIERNTEKPIREMASLLTHIAPARLFDELLKL
LMAGYGVQTWELLQQYGIVEPLLPLTYQILNRDADDHYQKFINSALISTDLRVNAGRPVT
PAFIYAALLWPAVKDQALYNLEMGTPEIPAWQKAMGQVLDRQVKTIAIPKRFSIPMKEIW
ELQLRLPKRSAHRAEQLVTHPRFRAAYDFLLLREQAGEQLDGLGNWWTEFQATNPAQRET
MLANLGTKSAPKRRRRRPTRAAQSDS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttaagtggataaaacgctggtttaaccagcctgttcaaaatttaaacctggtc
accgttcctcgggatcaacatcaggtatctcgcaaaggcatcagtcataatgcactgaag
gtcttgcatcgtctgcatggcgctggtcatgaagcattcctggtgggtggctgtgtccgc
gatctgcaactcggctatgcgccgaaggattttgacgttgccaccaatgccacgcctgaa
gatatccgtaagatattcagtaattcacgcattatcggccgacgcttccgcatcgtccat
gtgacctacggtcgcgagattattgaagtcaccacctttcgcggtaaggcagaagcatcc
ggttccgatcaaaagcaatcggctgaaggcatgttgctgcgcgacaatgtttacggctcc
ctagaagacgacgccaaacggcgcgacttcaccatcaatgccatgtactacaccgcgact
aacttttctgtgctcgcctacccacagggcatggaagatctgaacaacaaaattattcgc
attatcggcgacgctgaaactcgctaccgggaagacccggtgcgcatgctgcgggccatc
cgctttgccgccaaattgggctttagtatcgaacggaataccgagaaaccgatccgtgaa
atggcgtcgctattgacccatatcgcaccggcgcggttgttcgatgagttgctcaagctg
cttatggccggatatggcgtacaaacctgggaactgctgcaacaatacggcatcgtggaa
ccgctgttgccgttgacctaccaaattttgaaccgcgacgctgacgatcactatcagaag
tttatcaacagcgccctgattagcaccgatttgcgtgtcaatgctggccgaccggtgacc
ccggcctttatctatgcggcgctattatggcccgcggtgaaggatcaggcgctctacaac
cttgaaatgggcacgcctgagatacccgcttggcaaaaagccatgggtcaagttctcgat
cgccaggttaagaccatcgccatcccgaaacgattctctatcccgatgaaagagatttgg
gaattgcagctgagattgcccaagcggagcgcccatcgagctgaacagctggtgactcac
ccgcgtttcagagccgcctacgattttctactgttacgcgaacaggccggcgaacaactc
gatggtctgggcaactggtggacagaattccaagccaccaaccccgcacagcgcgaaacg
atgctggccaatctgggtaccaagtcggcacccaagcgacgccgtcgccgacccacgcgt
gccgctcaatcggattcgtga
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