Reinekea forsetii: REIFOR_02876
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Entry
REIFOR_02876 CDS
T05208
Name
(GenBank) DinG family ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
REIFOR_02876
09124 Replication and repair
03420 Nucleotide excision repair
REIFOR_02876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfo03021
]
REIFOR_02876
03036 Chromosome and associated proteins [BR:
rfo03036
]
REIFOR_02876
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_02876
Enzymes [BR:
rfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
REIFOR_02876
Transcription machinery [BR:
rfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
REIFOR_02876
Chromosome and associated proteins [BR:
rfo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
REIFOR_02876
DNA repair and recombination proteins [BR:
rfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
REIFOR_02876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
PhoH
DUF6930
Motif
Other DBs
NCBI-ProteinID:
ATX77997
UniProt:
A0A2K8KTE2
LinkDB
All DBs
Position
3138079..3140358
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AA seq
759 aa
AA seq
DB search
MPSRRYRVSVRALADFCQIQGDLISVYRPGPSAFEGQQTHNALQSKRAKPYQAETPLSFR
WQNPAFELVVSGRADGTFPDGVEEIKTTRVPPHDIPSGLRDLHHSQAKLYAAIYALQFDA
GPMLRVCNTYVHPQTLEEWPLERAYPVEQLLDYLLDCCLRYDAWLMRVDRHQRDRQPFLA
QLSFPFATMRPAQRLMAESVYKACRVGKDLCVEAPTGTGKTLAALFPALKAMTEVEVRSL
FFLTMKTTGQVAAHDALQRLDPAHRLSVVALTAKTRLCRSPDTPCDGQFCPYARDYFAKR
DRLREQLFEPIRWDPDALIELAEKEQICPYYLSQDWAIWSDVVIGDLNYIYDTTAVQPYL
LREIDNRATVLIDECHNLIDRGRMMFSAEFSGFALQQLLHQCPKKIQNRLRKIQTRLREV
CTKFGPGLCYESPQTLLHSLRDFMADSAALLRDNPQFEPDALWQPFLFSCTRFIRLHDLA
DAGDFCWRYGTGSPELRGIELICLNPARLLMSKHQLVNNVVAFSATLKPWPYSQQLNGLA
GAITQELPSPFQASQFSVYLANDVSTRFRDRTHLPERLRPLLNSLVGNGKNTLVFFSSYQ
QLQQAARLLDPAEALLVQRADWTARERDAVLAQFRAHRGLTLLTVLGGVFGEGIDLPGEQ
LEQVVVIGPGLPQVNDVNNAIRLQMDQQQLPGFDFAYAFPGLQKVLQAAGRCVRTDTDQG
EILLIDDRFDAYGQQGWLPVHWTVHSGPLQRWPGSLTAL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccgacgttatagggtctcggtgcgtgcgctggccgatttctgccagatccaa
ggcgatctgatcagcgtctatcggcccggcccgagcgcgttcgagggccaacagacgcac
aatgcactgcagagcaagcgcgccaaaccctatcaggcggaaacgccgctcagctttcgt
tggcaaaacccggcgtttgaactggtagtcagcggccgggccgatggcaccttccccgat
ggggtcgaggaaatcaaaaccacgcgcgtgccgccgcacgatattcccagcggcctgcgc
gacctgcatcacagccaggccaagctctatgccgcaatctacgccttgcagttcgacgcc
gggcccatgctgcgggtatgcaacacctacgtgcatccgcaaacattggaagagtggccg
ctggagcgtgcttatccggtcgaacaactgctcgattatctgctcgactgttgcctgcgc
tatgatgcctggctgatgcgggtcgatcgccatcaacgggatcggcaacccttcttggcg
cagctgtcattcccctttgcaaccatgcggccagcccaacgcctgatggccgaaagtgtt
tacaaggcttgtcgggtcggcaaagacctgtgcgtcgaagccccgaccggcaccggtaaa
accttggcggcgctgtttccggccctgaaggcgatgaccgaggtcgaggtgcgcagcctg
tttttcctcaccatgaaaaccaccggccaggtggccgcgcacgatgcattgcaacgactg
gacccggcgcatcggcttagcgtcgtcgccctgaccgccaaaacccgcctctgccgttcg
cccgacacaccctgcgatggccaattctgcccctatgcacgggactattttgccaaacgg
gaccggctacgcgagcagttgttcgagcccatccgctgggatcccgatgcgctgattgaa
ttggccgagaaggaacaaatttgcccctattacctgagccaggactgggctatttggtcg
gatgtggtcattggcgatctgaactatatctacgacacgaccgcggtgcagccctatctg
ttgcgcgagatcgacaaccgggccacggtactgatcgatgaatgccacaacctgatcgac
cgcggccggatgatgttcagcgccgagttttccggctttgcgctgcagcagttgctgcat
caatgtcccaagaaaatccagaaccgcttgcgcaaaatccagacgcgcttgcgcgaggtc
tgcactaagtttggccccggtctgtgttatgagtcgccccagactctgctgcacagtctg
cgcgactttatggccgacagcgccgcgctgctaagagacaacccccagtttgaaccggat
gcgctctggcagccttttttgttcagttgtacgcgttttattcgcttgcatgacttggcc
gacgccggcgacttctgctggcgctacggcaccggcagcccagagctgcgtggtattgaa
ctgatctgtttgaatcccgcccggctcttgatgagcaaacatcagctggtcaataatgtc
gtcgccttcagtgctacccttaagccttggccctatagccagcaactcaacggcctggcc
ggcgctatcacccaagagctgccgtcaccctttcaagccagccagtttagtgtctacttg
gccaacgatgtgtcgacccgctttcgcgatcggacccacttgccggaacgcctgcgcccg
ctcctgaacagcctggtcgggaacggcaaaaacaccctggtgtttttttccagctaccaa
caattgcagcaggccgcccgtctcttggaccccgccgaggcgctgttggtgcaacgcgcc
gattggactgcacgcgaacgcgacgcggtgttagcgcaattccgtgcgcaccgtgggctc
acgctactcaccgtattgggcggcgtctttggtgagggcatcgacttgccgggcgaacaa
ttggagcaggtggtcgtgatcggtcctggcttgccgcaggtcaatgacgtcaacaacgct
atccgcttgcagatggaccagcaacaactgccggggttcgacttcgcttatgcctttccg
ggcttgcagaaagtgttacaggcggccgggcgttgtgtccgcaccgacaccgatcagggc
gagatcctcttgatcgacgatcgttttgacgcctatggacagcagggctggttaccggtg
cattggacggtgcacagcggtccattgcagcgttggcccggttcactcacggcgctttaa
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