Reinekea forsetii: REIFOR_02881
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Entry
REIFOR_02881 CDS
T05208
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03030
DNA replication
rfo03410
Base excision repair
rfo03420
Nucleotide excision repair
rfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
REIFOR_02881
03410 Base excision repair
REIFOR_02881
03420 Nucleotide excision repair
REIFOR_02881
03440 Homologous recombination
REIFOR_02881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfo03032
]
REIFOR_02881
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_02881
Enzymes [BR:
rfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
REIFOR_02881
DNA replication proteins [BR:
rfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
REIFOR_02881
DNA repair and recombination proteins [BR:
rfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
REIFOR_02881
NER (nucleotide excision repair)
GGR (global genome repair) factors
REIFOR_02881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH
Motif
Other DBs
NCBI-ProteinID:
ATX78002
UniProt:
A0A2K8KTR0
LinkDB
All DBs
Position
complement(3143159..3145957)
Genome browser
AA seq
932 aa
AA seq
DB search
MVNNSTPVVLVDGSSYLFRAYHALPPLANAAGMQTGAIKGVVSMLRKLIEAYPSSPVVVV
FDAKGPTFRNEMYDQYKANRPPMPEELRAQIAPIHETVRAMGLPLLCIAGVEADDVIGTL
AEQATQQGRDCVISTGDKDMAQLVSAHVSLINTMNNEYLDVAGVGKKYGFGPERMIDYLA
LMGDKVDNIPGVPGVGEKTALALIQGLGGLDDIYGRLDEIAGLTFRGAKNMAAKLAEHRE
SAYMSYQLATIKLDVALDLGVQEYQTEAADKDALLALFEQFQFRSWIRDLTDGASPTASP
TASARPEPVSAVLPELVVPSACDYRVVEHLDELAAIIASAEQTRQLAYLPVLAKGHYRDP
VWIGLALATEPGRAWYLPFSAEDQPALPAAEVLAQLAPLWSAHAIVKTGFDIKADHHWFH
TLGWTPARLAKDVQLMAFVYDSTLKRDKSLSNHFANLSIDNLAICYLQQAPQTIEYFLGS
AGKRQLAASAVKADVIGPWWAERCDLLLRLGARFEQGLASRNLTRVYDQIERPLSSALAL
IERNGVVLDIDFINDLSVQFKARLATIEQQAHNIAGTTFNVDSPKQLAEILFEKMGLPVL
VKTANGAPSTNEEVLSDLAEDYELPRLILQSRHLRKLVGTYTDPLPILAQADARANYRLH
TTYNQTGAQTGRLSSNDPNLQNIPVRTDEGRSIRKAFIAPLNYQIVAADYSQIELRIMTH
LSQDANLIAAFQEGKDIHRATAADVMGVPESEVTTEQRRSAKAINFGLIYGMSAFGLAKQ
LGISRTEAKAYVDAYFERYPGVRRYMDETRAEAAETGYVETVFGRRLYLPGLQSSNQMVR
KGAERTAINAPMQGTAADIIKMAMVDVGNWLAASRLRAKMIMQVHDELVFEVHQDDQAAL
IAGVRFRMQHCANLDVPLIVDIDSGPSWESAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggttaacaattcaacacctgtggtgctcgtcgatggttcgtcctacctgtttcgcgcc
tatcatgcactcccaccgctggccaacgccgctggcatgcagaccggtgcgatcaagggt
gttgtctcgatgttacgcaagctgatcgaagcctatccgtcgagcccggtggtcgtggtg
ttcgatgccaagggcccaaccttccgcaacgagatgtacgatcaatacaaggccaatcgg
ccgcccatgcccgaggagttgcgcgcacagattgcgccgatccacgagacggtccgggcc
atgggtttgccgctgctgtgtatcgccggcgtcgaggccgatgatgtgatcggcaccctg
gccgagcaggccacgcaacagggtcgcgattgcgtcatcagcaccggcgataaggacatg
gcacagctggtcagcgcgcatgtttcgctgatcaataccatgaacaacgaatacctggat
gtcgccggcgtcggcaaaaaatacggtttcggcccggagcggatgatcgattacctggcc
ctgatgggtgataaggtcgacaacattcccggcgtgcccggcgtgggcgaaaagaccgcc
ctggctctgattcaaggcctgggtgggcttgatgatatctatggtcgcttagacgagatc
gctggcctgaccttccgcggtgctaaaaatatggccgccaagttagccgagcaccgcgag
tcggcttatatgagttatcagctggcgaccattaaactcgatgttgcgctcgatctaggg
gtgcaggaatatcagaccgaggccgcggataaggacgcgctgttggctctgtttgaacag
tttcagtttcgctcctggattcgcgatctgaccgatggcgccagcccgaccgccagcccg
actgcgagcgctcggccggaaccggtatcggccgtgttacctgagctcgtcgtgcccagc
gcatgcgactatcgggtggtggaacacctcgacgagttggcggccattatcgcctcggcc
gaacagactcgccagctggcctatttgccggttctggccaagggccactatcgggatccg
gtttggattggtttggcgctggccaccgaaccgggccgcgcctggtatctgccgttcagt
gccgaagatcagccggcgctgccggcggccgaggtgctggctcagttagcgccactctgg
tcggcccatgcaattgtcaaaaccggcttcgacatcaaggccgatcatcattggtttcac
accttgggctggaccccagcgcggctggcgaaagatgttcagctgatggcctttgtctac
gacagcacgctcaaacgcgataagagtctgagcaaccactttgccaatttgtcgatcgac
aatctggcgatctgttatttacagcaggcgccgcagactattgaatatttcttgggcagc
gccggcaaacggcagttggcagcgagcgcggtcaaggccgatgtcatcggcccctggtgg
gccgaacgctgtgatttgctgttgcgccttggcgcgcgcttcgaacagggcttggccagt
cgcaacctgacccgggtctatgatcagattgaacgcccgctgtcgtcggctttggcgcta
atcgagcgcaacggcgtagtgctcgatatagattttatcaacgatctcagcgtgcagttt
aaggcccgtttggcgaccatcgagcagcaggcgcacaatatagcgggcaccacctttaac
gtcgactcgcccaagcagttggccgaaatcctgttcgaaaagatggggttgccggtgttg
gttaagaccgccaatggcgcgccgtcgaccaatgaagaggtgctcagtgatctggccgaa
gactacgaactgcccaggctgatcttgcagtcgcgccatttgcgtaagctggtgggtacc
tataccgacccgttacccatcttggcgcaagccgatgctcgggcaaactaccggctgcac
accacctataaccagaccggtgcgcaaaccgggcgattaagttctaacgatcccaatttg
caaaatattcccgtgcgcaccgatgagggccgctcgattcgtaaggcctttatcgcaccg
ctaaattatcagatcgttgcggctgactattcgcaaattgaattacgcatcatgacccac
ctgagtcaggatgcgaatctgattgccgcgttccaagagggtaaggatatccaccgtgcc
accgcggccgatgtcatgggcgtcccggaaagcgaggtcaccaccgagcaacgtcgctcg
gctaaagcgatcaacttcggtttgatttatggcatgtccgcctttggtttggccaaacag
ttgggcatcagtcgcaccgaggccaaggcctatgtcgatgcctactttgagcgctatccc
ggggtgcggcgttatatggatgaaacccgtgccgaagctgccgaaaccggctatgtcgaa
acggtctttggccgtcggctctatttaccgggtctacagtcgtccaatcagatggtacgc
aagggcgctgaacgcaccgctattaatgctccgatgcagggtaccgcagccgacatcatc
aagatggccatggtcgatgtcggtaattggttagcggccagtcgtttgcgcgcgaaaatg
attatgcaggtgcacgatgaattggtatttgaagtccaccaagacgatcaggcggccctg
atagccggggtgcggtttcgcatgcaacactgtgccaatctggatgtgccactgatcgtc
gatattgatagcggcccatcttgggagtcggcgcactaa
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