Reinekea forsetii: REIFOR_03076
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Entry
REIFOR_03076 CDS
T05208
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
REIFOR_03076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_03076
Enzymes [BR:
rfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
REIFOR_03076
DNA repair and recombination proteins [BR:
rfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
REIFOR_03076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ATX78195
UniProt:
A0A2K8KTX1
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All DBs
Position
3360977..3364261
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AA seq
1094 aa
AA seq
DB search
MLYTYPSNRLENLVSALDTLLQSSTAPVLAADVILVQHPGMQHWLSMELAKLPSRQICMN
AVYPLPVRYFWDLIRLILGPERIPERSVYSREILAWRIYALLQTPALADDPLMAEPTQYW
QDQPATLRDSRRFQLSEQLADLYEQYLMFRPEWIEQWQTGATPHWQAKLWQALVAQNADH
PLALMRAALGSIDQPAAKLPGTFYIFGINALAPIWLDFLSQIASRADVDIHLLYLNPSVE
YWDELRSEKQLSKELVRASQTRANWVLEQQDAQRTSLPDVGNPLLASLGHQGQTFVRLLS
DKAHYDLQVFSPVGRQSFLGQLQDDILQLKDARPTPPALPEPPADESICITSAHSPFREV
QALHDWLLHQFNQDPSLTPKDVVVMCPNVEDYAPFVQAVFARSFANIQDSVPPLPCSIAD
RNLKDADPTVAAFLELLTLPDARFEVNQILAWLRVPAIAAKFSLSANDIQTISQWLEHAN
IHWGLNSQHKQQWVSGEVSDHFTWQQGLDRLLLGFAYSDQSLYLNDQVLLPDVEGSAGLL
LGKLTQIIGQLRDVRSQLVAARTPSQWQAYLIEQIQIALLSSDALFERSNQALLKAINDV
TEYANQAGLQAEKIPLTVMRAVLEQAFASPEQTGSQFMTGQITVCSMVPMRSIPFRIVAI
LGLNDGQFPRTRPPLGFDLMAQDPIRLGDRSRRGDDRYLFLEALLSARDALYLSYQGYDI
HKNEERPPSLVLDELINYLNLGYGFDPAHDLRRMALQPFSRKNYQGALPSFDAHWASLLD
ARPLVDQGHQVPPLAELKNHWRLDEWIRFFTHPAQYFAQQRLGLYLQQDRDEGLDDSEPF
DMSYLDRYSIKVESIQQAIQAQTTPSASVDILTYRRANSAVPLHALVGEEIAQWQDQAAD
FSRHLIALGAQTLTLSHRVLELNSATPALELTADLPLTDSHGLLFWRPASIKGKDLISLW
LHHLVANAGGESCHSQAIFHGTKESLVLLSCAPVEQAQAQLSAFYAVLKQGLEQPLFLNA
DLALACLLGKDDDKAFASNWQDSYNQRGYSYDSYIAQFWSVRPDYDSTLAAVQDCYGALI
AGIKITTLSEAEHE
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgctctatacctacccgtcgaaccggcttgaaaacctggtcagcgcgctcgataccttg
ctgcaatcctccaccgcgccggtgctggccgccgatgtcattttggtgcaacacccgggt
atgcagcattggttgagtatggagctggccaagttaccgagccggcaaatctgcatgaac
gccgtttatccgttgccggtgcgctatttctgggatctgattcggctcatattggggccg
gagcgcatcccggagcggtcggtgtacagtcgggagattttggcttggcgtatctacgcc
ctattgcaaacccctgcgctggctgacgatccgctgatggccgaaccgacccaatattgg
caagaccaacctgcaaccctgcgtgacagccgtcgctttcaactgagcgaacagctggcc
gatctctatgaacagtatctgatgtttcggcccgagtggattgagcagtggcagaccggt
gctacgccccattggcaggctaagctgtggcaagccctggtcgcgcaaaacgccgaccat
ccactggcgttaatgcgagccgccttggggtctatcgaccagccagcggccaaattgccc
ggcaccttttatatttttggtatcaacgccctggcaccgatctggctcgactttctcagc
caaattgccagtcgagcggacgtcgatattcatctgctttatctcaatcccagtgtcgag
tattgggatgaactgcgctcggaaaaacaactcagtaaggaactggtgcgggcctcgcaa
acccgggccaactgggtcctagaacagcaggacgcgcaacgcaccagcctgcccgatgtc
ggtaaccccttactcgccagcttgggccaccagggccagacctttgtgcgtctgctgtcc
gataaggcgcactatgacttacaggtgttttcgccggttggacgccaatcttttctcggc
caattgcaggatgacatcttacagctcaaggatgctcggccgaccccgccagcactgccc
gagccacccgccgatgagagcatctgcatcacctcggcgcacagcccctttcgcgaggtg
caagccctgcacgattggttgctgcatcagttcaatcaggacccaagcctgactccgaag
gatgtggtggtgatgtgtcccaatgtcgaggactatgcgccctttgtgcaggcggtcttt
gcgcgcagcttcgccaacattcaagacagcgtgccgcccctgccgtgctccattgccgac
cgtaatctaaaagatgccgatcctacggtcgcggcctttctcgagctgctcaccctgccc
gatgcccgcttcgaggtgaatcaaatcttggcctggttacgggtgccggccattgccgcc
aaattttcgctttcggccaatgatattcaaaccatcagccagtggttggagcacgccaat
attcattggggcttgaacagccagcacaagcaacagtgggtatcaggcgaagtaagtgac
cactttacttggcagcaagggctagaccggctgttacttggctttgcctacagcgatcag
agcctgtacctgaacgatcaggttctgctgcccgatgtcgaaggcagtgccggtctgtta
ctcggtaagctcacccagattatcggccagctgcgcgatgtacgttcccagttagtggcc
gcccgcacaccatctcaatggcaggcctatctgatcgagcagatccagattgccctgctg
tccagcgatgcactgtttgaacgcagtaatcaggccctgcttaaggcgatcaatgatgtt
accgaatacgccaatcaggccggcctacaggcggaaaaaattccgctcacggtgatgcgt
gcagtgttggagcaagcctttgccagcccggaacagaccggcagccaatttatgaccgga
caaatcaccgtctgttcgatggtgccgatgcgttcgattccgtttcgtattgtcgccatt
cttggactcaatgacggtcagtttccgcgtacccgcccgccgctcggcttcgatctcatg
gcccaagacccgattcggctcggcgaccgatcgcgccggggtgacgaccgctatctgttt
ttggaagcgctgttatcggcacgcgatgcgctctatttaagttatcagggttacgatatt
cacaagaatgaagagcgtccgccatccttggtgcttgatgagttgatcaactatctcaac
ctgggttatggcttcgaccccgctcacgatttacgccgcatggccctgcagccgttcagt
cgaaaaaactatcagggtgctttgccttccttcgatgcccattgggcgagcctactcgat
gcccgcccactggttgaccaaggccaccaggtgccgcccttggcggagctaaaaaaccat
tggcgactggatgaatggatccgatttttcacccacccagcgcagtactttgctcagcaa
cggctcggtttatatttgcagcaggatcgcgacgagggcctggacgacagcgaacccttt
gatatgagttacctcgaccggtacagcattaaggttgagtcgatacaacaggctattcaa
gcgcaaacgactccgagcgcctcggtcgacatcctgacctatcgccgggccaatagtgcc
gtgccgctgcacgccttggtgggcgaggaaatcgctcagtggcaagatcaggcggccgat
ttcagccgccatttgatcgcactcggcgcacagaccctaacgctcagccatagggtactc
gaactcaacagcgcaacaccggcacttgagctaaccgccgacctgccgctgaccgactcg
catgggttgctgttttggcgcccggcttcgatcaagggtaaggatctgatcagcctctgg
ttgcaccatctggtcgccaacgccggcggcgagtcgtgccacagccaggccatttttcac
ggtaccaaggagagcctggtcttgctcagctgtgcgccggtagagcaggcgcaagcgcaa
ctgagcgcattctatgccgtgctcaaacagggtctggagcagccgttgtttttaaacgcc
gatctggcgctggcctgcctgttgggcaaggacgatgacaaggcctttgcgtcgaattgg
caagacagctataaccagcgcggctacagctatgattcctatatcgcccagttttggtcg
gtgcggccagactacgacagcaccctggccgccgtgcaggactgttacggtgcactgatc
gccggtattaaaatcaccaccctaagcgaggccgagcatgaatga
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