Reinekea forsetii: REIFOR_03078
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Entry
REIFOR_03078 CDS
T05208
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
REIFOR_03078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_03078
Enzymes [BR:
rfo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
REIFOR_03078
DNA repair and recombination proteins [BR:
rfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
REIFOR_03078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
AAA_22
UvrD_C
AAA_5
CbiA
Herpes_Helicase
AAA_16
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ATX78197
UniProt:
A0A2K8KTY7
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All DBs
Position
3367658..3369424
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AA seq
588 aa
AA seq
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MTLNLASPFQALDFALAESIAQWHQTDDALFKQSVMAVSYALQQGHSCLSLVQCLDEAPY
RDMSQFGLPALPSAADWQTHLSTFGIGPEDGSPLVLHNQRLYLRRYWQFESELLAFLAER
YQQPSSLSQAQLEQARKLLASYFAPTPGQIDWQQVAAANSLFSNVSTIIGGPGTGKTHTV
TRILALLAGLSDRPLVIKLAAPTGKAAQRLAEAIREAKAALNLDMLVDQAIPNEAHTLHR
LLGVIPNRLQFRHQGDNPIEADVLLIDEVSMVDLPLMARLFRAIKPTTRLILLGDADQLP
SVAAGSVLADLVRKPHPGYSEARRSQLQAVGIKLPAASIELGAPLDSVTELTLSRRFAHG
SGIGALAQAVIRGDASGSLAVFTDAADLTWLGAHDLHDCLHGWIRNHYRAIAEQPDLHQA
FAHLKTFRILCALRDGERGVTALNDWISQRLNPSRQPFFKGQPIMVTQNHYGLKLFNGDV
GLVWPNEDGQLMVWFEAEGEPRPVTPGRLPTFETVYAMTIHKTQGSEFDEVALVLPDHQS
QLLSRELIYTGLTRAKKRFSCLGTAAVWRAGVTARVDRWAGLAARLQG
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttaacctagccagcccctttcaggcgctcgacttcgcattggccgagagcatc
gctcagtggcatcagacagatgatgcgctgttcaaacaatcggtgatggcggtcagctat
gccttacaacaggggcacagttgcctgtcgctggtgcagtgtctcgacgaggcgccgtac
cgtgatatgagccagtttggcctgccggccttgcccagcgctgcggattggcaaacgcac
ttatcgacctttggcatcggccccgaagatgggtcaccgttggtgctgcacaaccagcgc
ctctatctgcgccgttattggcagtttgaaagcgagctgttggctttcttggccgagcgc
tatcaacaacccagcagcctcagccaggctcagctcgagcaggcgcgcaaactcttggcc
agctattttgcaccgacgccggggcaaatcgattggcagcaggtcgccgcggccaacagc
ctgttcagcaatgtcagcaccattattggcggccccggtaccggcaagacccatacggtg
acgcgtattcttgcgctgctcgcgggcctgagcgatcggccgctggtgattaaactggcc
gcgccgaccggcaaggcagcacagcgcctggccgaggcaatccgcgaggctaaggcggca
ttgaatctggatatgttggtcgatcaggccatccccaatgaggcccacaccctgcaccga
ttgctcggggtcattcccaatcgactgcagtttcgtcaccaaggtgataacccgatcgag
gccgatgtgctgttgatcgatgaggtctcgatggtcgacttaccgctgatggcccggctg
ttccgcgcgatcaaaccgaccacgcggctgattctgctcggcgatgccgatcaattgccc
tcggtcgctgccggcagcgtcttggccgatctggtgcgcaagccacatcccggttacagc
gaagcccgccgcagccaattgcaggcagtgggcatcaagctcccggccgccagcatcgag
cttggcgccccgctcgatagcgtaacagaactgaccctgagtcgacgttttgcccacggc
agtggcattggcgccctggcccaagcggtgatccggggcgatgcttcgggcagcctggcg
gtctttaccgatgccgccgatctaacctggctcggcgcacacgacctgcacgattgcctg
cacggctggattcgcaaccattaccgggccatcgccgaacagcccgatctgcaccaggcc
tttgcgcacttaaagaccttccgcatcctgtgcgcccttcgtgacggcgaacgcggcgta
acggccctcaatgactggatcagccaacggctcaatcccagccggcaacccttctttaag
ggccaaccaatcatggtcacgcagaatcactatggtctaaaactctttaatggcgatgtc
ggcctggtctggccgaacgaggacgggcagttaatggtctggttcgaggccgagggtgaa
ccgcgtccggtgacgccgggtcgcttaccgaccttcgagacggtgtacgccatgacaatc
cataaaactcagggatcggaattcgatgaagtggcgttggtgttaccggaccatcaatcg
cagttgctgagccgggaactgatctacaccggcctaacccgagccaaaaaacgcttcagc
tgcttgggcacggctgctgtttggcgcgcaggggttacggcgcgggttgatcgctgggcg
gggttggcggcgcggttgcagggataa
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