Rhinolophus ferrumequinum (greater horseshoe bat): 117012134
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Entry
117012134 CDS
T07722
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfq03009
]
117012134 (DDX56)
Enzymes [BR:
rfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117012134 (DDX56)
Ribosome biogenesis [BR:
rfq03009
]
Eukaryotic type
Pre-60S particles
Helicases
117012134 (DDX56)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
117012134
NCBI-ProteinID:
XP_032943960
Ensembl:
ENSRFEG00010020937
UniProt:
A0A671G9L3
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All DBs
Position
20:complement(307545..316618)
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AA seq
546 aa
AA seq
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MAEPEVLGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLAAYCARDIRVANVSA
ADDSASQRAVLMEKPDVVVGTPSRILSHLQQDSLKLRDSLELLVMDEADLLFSFGFEEEL
KSLLCHLPRIYQAFLMSATFNEDVQTLKELVLHNPVTLKLQESQLPGPEQLQQFQVVCAT
EEDKFLLLCALLKLSLVRGKSLIFVNTLERSYRLRLFLEQLGIPTCVLNGELPVRSRCHI
ISQFNQGLYDCVIATDAEVLGAPLKGKRRGKGPKGDRASDPEAGVARGIDFHHVCAVLNF
DLPPTPEAYIHRAGRTARANNPGTVLTFVLPTEQPHLGRIEELLGGETGAPALLPYQFRM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLRSEKLKTYFEDNPKDLQLLRHDLPL
HPAVVKPHLGHVPDYLVPPALRGLVRPHRKRKKLCPSKKAKKVKAHNPLRSFRHRGEKHR
SAAAPS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccggaggtgttgggcttcgaacacatgggcctcgacccccggctcctgcag
gccgtcaccgacctgggctggtcgcggccgacgctgatccaggaaaaggccatcccgctg
gccctggaggggaaggacctcctggctcgggcccgcactggctcggggaagacggccgct
tatgccattccgatgctgcagctgctgctccacaggaaggcgacaggccccgtggtagag
caggctgtgagaggccttgtcctcgtgcccaccaaggaactggcacggcaggcccagtcc
atgattcagcagctggcagcctactgtgcccgagacatccgggtggccaatgtatcagct
gctgatgactcggcctctcagagagctgtgctgatggagaagcccgatgtagtggtgggg
accccctctcgcatattaagccacttgcagcaagacagcttgaagctgcgagactccctg
gagctgctggtgatggatgaggctgatcttctcttttcctttggctttgaggaagagctc
aagagtcttctctgtcacttgccccggatttatcaggcttttctgatgtcggctactttc
aatgaggatgtacaaacactcaaggagctggtactgcataacccggtcaccctcaagttg
caagagtcccagctgccagggccagagcagctgcagcagtttcaggtggtgtgtgccact
gaggaagacaagtttctgttgctgtgcgcgctgctcaagttgtcgctggtccggggcaag
tccctgatcttcgtcaatacgctggagcgcagttaccggctgcgcctattcctggagcag
cttggcatccccacctgcgtgctcaacggagagctccctgtgcgctccaggtgccacatc
atctcacagttcaaccagggcttgtacgactgtgtcatagcaactgatgccgaagtcctg
ggggccccgctcaaaggcaagcgtcgggggaaaggacccaagggggacagggcctccgat
cccgaggcaggcgtggcccggggcatcgacttccaccacgtgtgtgccgtactcaacttc
gacctgccccccacccccgaggcctacatccatcgagctggcaggacggcacgtgccaac
aacccaggcacagtcctgaccttcgtgctgcccacagagcagccccacctgggcaggatc
gaggagctacttggtggagagaccggggcccccgccctgcttccctaccagttccgcatg
gaggagattgaaggctttcgctaccgctgcagggatgccatgcgctcggtgactaagcaa
gccattcgagaggcgaggctgaaggagatcaaggaggaactcctgcgctcggagaagctc
aagacgtactttgaagacaaccccaaggacctgcagctgctgcggcacgacctgcccttg
catcctgctgtggtgaagccgcacctgggccacgtgcccgactacctggttcctcctgct
cttcgaggcctcgtccgccctcataggaagcggaagaagctgtgcccctctaagaaggcc
aagaaggtgaaggcccacaacccactgcgcagcttccggcacagaggagaaaagcacaga
tcagcggcagcgccctcctga
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