Rhinolophus ferrumequinum (greater horseshoe bat): 117012426
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Entry
117012426 CDS
T07722
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rfq04131
]
117012426 (VPS50)
Membrane trafficking [BR:
rfq04131
]
Protein recycling
Others
EARP complex
117012426 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
117012426
NCBI-ProteinID:
XP_032944584
Ensembl:
ENSRFEG00010014985
UniProt:
A0A671FGN1
LinkDB
All DBs
Position
20:complement(33037506..33153538)
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AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNMMGTEETDFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQQTSASSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEPEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYMYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVILTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccgacagggtctgaaaagccctcccgagagcctc
agtgaccttggtgccattgagagtctccgcgtccccggaaaggaggaattccgagaactt
cgagaacagcctagtgaccctcaagctgaacaagaactaattaatagtattgaacaagta
tatttttctacagactcatttgatattgttaaatatgagctagagaagctccctcctgtt
ctcagtttgcaagaattagaggagtacagagacaagttgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgagaagcagcctgcttacgtaaaggaacttgaa
agagttacctcattacagacaggtcttcagttagcggctgttatctgcacaaatgggagg
agacacttgaatattgcaaaggaaggttttactcaggctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgcgaactataaaaacattg
caaagaacagatgtgcgcttaagtgaaatgctagaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagctgccagcacttttaaacattacagctgcataagt
gaactgaattcaaagctgcaagatactttagaacaaattgaggaacagttggatgtagct
ctttctaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcacatgcacttcactcaagcc
atacataataccgtgtttcaagttgttcttggttatgtggaactctgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaagatctctgtacacacgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaggttatgctcagctattac
aggactatggaatggcatgaaaagcatgacaatgaggatactacctctgcttctgaaggg
agtaatatgatgggtactgaagaaactgattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcaactaaaagtaaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgacttcatcttcgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagagtct
attagaaaacaaagtgtcaattattttaagaactaccatagaacacggcttgatgaactg
agaatgtttctagagaatgaaacctgggaactttgtcctgttaagtcaaatttcagcatc
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagt
aagcagcaaacctcagcttcctcaaaaacagtgaccttgtttgagcagtactgtagtggt
gggaatccgtttgaaattcaggccaaccacaaagatgaagaaacagaagatgtcctggct
tctaatggctatgaatctgatgaaccagaaaaaagtgcctatcaggagtatgacagtgac
agcgatgtccccgaggaactgaaacgtgattatgtggatgagcagacgggcgacgcgcct
gtgaaaagcgtttctcgggaaaccctaaagagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacactgaatgtaataagacttgttggtaaa
tatatgcagatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtct
cagctatttgattattacatgtatgcaatatataccttttttggtcggaatgattcgttg
gaatcaacaggactaggccttagtagtagtagactaagaacaactctgaacagaatacaa
gagagccttattgatctggaagtttcagctgatcctactgccacgctcacagcagcagaa
gagagaaaggagaaggtaccgagcccacacctcagtcatctagtgattttgacatctggg
gacacattgtatgggttggcagaaagagtggtggccacagaatctttggtattcttggct
gaacagtttgagttcctccagccgcatctggatgctgtgatgcccgcagtcaaaaagccc
tttcttcagcagttttattctcagacagtctcaacggccagtgaactccgcaaaccaatt
tattggattgtcgctggcaaagccattgactatgaacagatgctactcctgatggctaac
gtgaaatgggatgtcaaagaaattatgtcacagcacaacatatacgtagatgcattgttg
aaggaatttgagcagtttaacagaaggttaaatgaggtttctaagagagttcggataccc
ttgcctgtgtctaatatactttgggaacattgtatacgactggctaatagaactattgtg
gaaggatatgccaatgttaagaagtgtagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaa
gaatttgtggaaacctatattaaagcctactacctaactgagaatgacatggaacgctgg
atcaaagagcacagggaatattcaacgaagcaactgaccaatctggtaaatgtttgcctg
ggatcccatatcaataaaaaagcaagacagaaacttctagcagctatagatgatatagac
agacccaaaagataa
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