Rhinolophus ferrumequinum (greater horseshoe bat): 117013027
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Entry
117013027 CDS
T07722
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq00260
Glycine, serine and threonine metabolism
rfq00630
Glyoxylate and dicarboxylate metabolism
rfq00670
One carbon pool by folate
rfq01100
Metabolic pathways
rfq01200
Carbon metabolism
rfq01230
Biosynthesis of amino acids
rfq01240
Biosynthesis of cofactors
rfq01523
Antifolate resistance
rfq04981
Folate transport and metabolism
Module
rfq_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117013027 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117013027 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117013027 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
117013027 (SHMT1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
117013027 (SHMT1)
Enzymes [BR:
rfq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
117013027 (SHMT1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
117013027
NCBI-ProteinID:
XP_032945558
Ensembl:
ENSRFEG00010005662
UniProt:
A0A671E4Y6
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All DBs
Position
21:526915..556467
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AA seq
484 aa
AA seq
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MATPVSGSHKDADLWPSHEKMMAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRA
VLEALGSCLNNKYSEGYPGQRYYGGTEFVDELEILCQKRALQVYDLDPQCWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGY
INYDQLEENARLFHPKLIIAGTSCYSRNLDYARLRRIADDNGAYLMADMAHISGLVAAGV
VPSPFEHCHVVSTTTHKTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGL
QGGPHNHAIAGVAVALKQAMTPEFRIYQRQVVANSRALAATLMELGYTVVTGGSDNHLIL
VDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKEFQK
VAHFIHRGIELTLQLQSDVGARATLKEFKEKLAGDEKHRSAIRALREEVESFASLFPLPG
LPDF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccagtcagcgggtctcacaaggatgccgacctgtggccctcgcatgagaaa
atgatggcacagcccctgaaagacagcgacgttgaggtttacaacatcattaagaaggag
agtaaccggcagagggttggattggagctgatcgcctccgagaatttcgccagccgggca
gttttggaggccctaggctcttgcttaaataacaagtactctgaggggtacccaggccag
aggtattatggcgggactgagtttgtcgatgagctggagatcctctgtcagaaacgagcg
ctgcaggtctatgatctggacccccagtgctggggggtcaacgtccagccatattcaggc
tcccctgccaacttcgcagtgtacaccgccctggtggaaccccacgggcgcatcatgggt
ctggacctgcccgatggaggccacctgacccatggcttcatgacagaaaagaagaaaatc
tcggctacatccatcttttttgaatctatgccctataaggtgaacccggagactggctac
atcaactatgaccaactggaggaaaacgcccgcctgttccacccgaagctgattatcgca
ggaaccagctgctactcccgaaacctggactatgctcgactgcggaggattgccgatgac
aatggagcgtatctcatggcggacatggcgcacatcagtgggctggtagcggcgggcgtg
gtgccctcgcccttcgaacactgccacgtggtgtccaccaccacccacaaaacgctgaga
ggctgccgagccggcatgatcttctacaggagaggagtacgcagcgtggatcccaaaacc
ggcaaagagattctgtacaacctggagtcgctcatcaactctgctgtgttcccaggcctg
cagggaggtccccacaaccacgccattgctggtgttgctgtggccctgaagcaagccatg
acgccagagttcagaatctatcagcgccaggtggtggccaacagcagggctctggctgcg
accttgatggagctgggctacacggtcgtgacaggtggttctgacaaccatttgatcctc
gtggatctccgttccaaaggcacagatggtggcagggctgagaaggtgctagaagcctgt
tctattgcctgcaacaagaacacctgcccaggtgacaaaagtgcactgcgacccagcggg
ctgcgactggggaccccagcactgacgtcccgaggacttctggaaaaagagttccaaaaa
gtagcccactttattcacagagggatagaactgactctgcagcttcagagcgacgtcggt
gccagagccaccctgaaggagttcaaggagaagctggcaggggacgagaagcaccgcagt
gccatcagggctctcagggaggaggtggagagcttcgcgtctctcttccctctgcctggc
ctgcccgacttctag
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