Rhinolophus ferrumequinum (greater horseshoe bat): 117013073
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Entry
117013073 CDS
T07722
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117013073 (HELZ)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
117013073 (HELZ)
3'-5' decay
Other 3'-5' decay factors
117013073 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
UvrD-helicase
zf-CCCH
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_7
AAA_16
Bac_DnaA
AAA_5
Motif
Other DBs
NCBI-GeneID:
117013073
NCBI-ProteinID:
XP_032945675
Ensembl:
ENSRFEG00010005738
UniProt:
A0A671E592
LinkDB
All DBs
Position
21:43594713..43735527
Genome browser
AA seq
1937 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDGAFQAVLCCMQLKGKLQPVANILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSHVLSGCHLEDFEEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KENLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDITMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHMLQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNANKLQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SIGQPQNQHQEKDQHEQNRNGKSDTNNPGPEINKIRTPEKKPTESKQIDLESNPQSRSPE
SRPGVVYPNTKFHRKDNLNPRHINLPPPAPHAQYAIPSRHFHPLPQLPRPPFPIPQQHAL
LNQQQNNLPEQPNQMPPQPNQVVQQQNPLNQLTQQPPPRLSPAYQGGPSSAFFNNAVSHR
PQSPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPSHLNNFTDENPPGLPIGETLDRM
HGSVALETLRQQQVRLQQWNEHHAYLSQGSIPYPHHHHPHPHLQHLPQPPVRADWKLPSS
AEDEAETADSRFQDLLRELSNRDQSETRELAEMPPPQSRLLQYRQIQTRSPPAVPSPPSS
TDHSSHFSNFNDNSRDVEVANNPAFPQRLPPQIFSSPFSLPSEHLAPPPLKYLAPDGAWT
FANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPS
LEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHNNQSSFNFSSPESW
INTSPTPYQNIPCNGSSRTAQPRELIAPPKTVKPSEDQLKSENLEVSSSFNYKVLQHLGQ
FPPLLPNKQIAESAASSSPQSCGGSKPAMSYASALRAPPKPRPPPEQAKKSSDPLSLFQE
LSLGSSSGSNGFYSYFK
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcgtgtgaatcacttaagaggcag
gactatgaaatggccctaaagcactgcacagaggcccttctttctcttggccagtactcc
atggccgatttcacagggccatgtccactggagatagaaagcatcaaaattgagagcctt
ctctacagaattgcctcatttttacaactgaaaaactatgggcaagctgatgaagactgt
agacatgtgctgggagaaggtctcgccaagggagatggtgccttccaggcggtgctttgt
tgcatgcagctgaaaggaaagctccaacctgtagccaacattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaagattaaaaacacttctcaca
gaaactgagacagcaactagtcatgtcctctctggatgtcacctggaagacttcgaagag
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcgcagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggttgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgcttagtgaatgtatagaaggagta
aaagtagagcataatccagatctgtcggttactgtcaacaccaaaaagtctcaccagacg
tggacctttgctctcacgtgtaagcctgcaagaatgctgtatcgcgtagcattgctttac
gatgcgcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgaatacctgatgcatgcaaaacaacagctagta
accacagctaagcgttgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctatttacccagtccgttttagacaaatcattgaccaagaccaactatcagtcacggttg
catgaccttctttatattgaggaaatagcccagtataaagaagtcagcaagttcaacctt
aaagtgcaattgcagattctagcaagcttcatgctcactggggtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaggagaacttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattatgacacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcattatgcgctagacaggatcaaggacaatggggttttatttccagacatc
actatgactccaaccataccttggagtcccaacagacagtgggacgaacagttggatcct
cgactaaatgcaaaacagaaagaggctgttctggctattacaactccactttcaatacag
ctgcctcctgttctcatcattggaccctatggcacaggcaaaacattcactctcgctcag
gccgtaaagcacatgctccagcagcaggagacgagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgttcaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaa
gaagatattcttaaacaccgagtggtggttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacgcacattctattagatgaagctgcccaggcc
atggagtgtgaaaccattatgcctctagcattagcaactaaaaacactcggattgtcttg
gctggtgaccacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcatgtttcattacttgatcgactctatgagcattatcctgccgagtttccatgtagg
atcctcctatgtgagaactaccgctcccatgaagctatcatcaattacacctccgagctc
ttctacgagggcaaactgatggccagtggaaagcaaccagcacacaaagatttctaccca
ctaactttctttacagcacgaggggaagatgtgcaagaaaaaaatagcacagctttttat
aataatgcagaggtatttgaagtggtggaacgtgtggaagagttaagaaggaagtggcca
gtagcgtgggggaagttagatgacggcagtatcggtgtggtgaccccgtatgctgatcaa
gtgtttaggatacgtgctgaacttcggaaaaagagattatctgatgttaatgtagaaaga
gtgctaaatgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaagg
catacttgtaaacataaacagacaccaattaaaaagaaagagcaactgctggaagattcc
acagaggacttagattatggttttttatctaactacaaacttctcaatactgccatcaca
agagcacaatccctggttgccgtggtgggcgatcccattgctctgtgctctattggaaga
tgcaggaaattttgggagcggtttattgccctgtgtcatgaaaataatagcctacatgga
atcacttttgaacagatcaaagctcagctagaggctttagaactaaagaagacatacgtg
ttgaatccactggcacccgaatttatcccgcgggctctaagactgcagcattcaggaaat
gccaacaagctgcagcagtcacctcccaaggggaaaagccttcatcatacccagaatgat
catttccagaatgatggaattgttcagcccaatccttccgtacttattggcaatcctatt
agagcatatactcctccaccccctcttggacctcacccaaatttggggaaatctccaagc
cctgttcagagaatagatcctcacactgggacaagtattctttatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtagg
tttgccgttgatcctcgaatcattacacaccaagcagcaatggcctacaacatgaacctc
ttacagacacatggacgggggtctcctataccgtatggcctcgggcatcatccacctgtc
agcatagggcaaccacaaaaccagcatcaggagaaggatcaacatgagcaaaatcgaaat
ggtaaaagtgatacaaataatcctggacctgaaattaataagattcgaacaccagagaag
aagcctacagaatcaaaacagattgatttggaatcaaatccacagagcagaagtcctgaa
tcacgtcctggtgttgtttatcccaataccaaatttcatcgcaaagataatctcaaccca
agacacataaatcttcctcctcctgctccccatgctcagtatgcaatccctagtcgtcat
tttcatccccttccgcagctaccaagaccaccatttccaattccgcagcagcacgccttg
ttaaatcagcagcagaataatttgcctgaacaacccaatcaaatgcccccccaaccaaat
caggtagtacagcagcagaatccgttgaatcagctgactcagcagccacctcctcgactt
tctcctgcctatcagggaggacccagcagtgctttttttaataatgcagtttctcatcga
ccacagtcccctcctgcagaggctgtgattcctgagcagcagccacctcccatgctgcaa
gaaggccacagtcccctgcgagccattgcacagcctggccccattcttccttcacatctg
aataacttcactgatgagaaccctccaggattgcctataggggagactttagatcgtatg
catgggagtgtagctttggagacattaaggcagcagcaagtacggttacagcagtggaac
gaacatcatgcctatctcagccagggcagcattccgtacccacaccatcaccatcctcat
cctcacctccagcatcttcctcagccgccagtgagagcagactggaagcttcccagcagt
gccgaggatgaagccgaaacagcagactcgaggtttcaagacttactcagagaactgtcg
aatcgtgatcaaagtgaaacgcgggaactagctgaaatgccaccacctcaatcaagactt
ttgcaatatagacaaattcagactaggagcccaccagcagtcccatctcccccatccagt
acagaccacagtagccacttttctaacttcaatgacaacagcagagacgttgaagtagcc
aacaacccagcatttccacagcgcctgccaccccagatattcagctcgcctttctcgttg
ccatcggaacaccttgcccctcctcccctgaaatacctggcacctgatggagcatggact
tttgctaacttacaacagaatcacctaatggggccgggttttccctatggcctacctcca
ttgcctcacaggccaccgcagaacccttttgtacagatacagaatcaccaacatgctatt
ggtcaagagccatttcacccattgtcatctcgaacagtatcatcttcttcgctccccagc
ttagaagagtatgaacccagagggcctggtcggcccttgtaccaaagaagaatctcatct
agctcagtccagccttgttctgaagaagtgagcactcctcaagacagccttgctcagtgt
aaagagcttcaggaccataataaccaatcttctttcaacttttcatccccggagtcctgg
ataaacacctcacctaccccctaccagaacattccgtgcaatggctccagcaggacagct
cagcccagagaattgatagctccacccaagaccgtgaaaccctctgaggatcaactgaag
tccgaaaaccttgaggtgtccagttccttcaactataaggtgctgcagcatctcggccag
ttcccccccctcctgcccaacaagcagatcgcggagtcggccgccagcagcagcccgcag
agctgtgggggcagcaagcccgccatgtcctacgccagcgctctgcgggcgccccccaaa
ccccggcccccacccgagcaagccaagaagagcagcgaccctctgtccctgttccaggaa
cttagcctggggagctcctcgggcagcaatggcttttactcctattttaaataa
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integrated database retrieval system
