Rhinolophus ferrumequinum (greater horseshoe bat): 117013541
Help
Entry
117013541 CDS
T07722
Symbol
BPTF
Name
(RefSeq) nucleosome-remodeling factor subunit BPTF isoform X1
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117013541 (BPTF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfq03036
]
117013541 (BPTF)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
117013541 (BPTF)
NuRF complex (fruit fly)
117013541 (BPTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
PHD
DDT
WSD
WHIM1
PHD_5
Motif
Other DBs
NCBI-GeneID:
117013541
NCBI-ProteinID:
XP_032946690
Ensembl:
ENSRFEG00010016666
LinkDB
All DBs
Position
21:complement(43105468..43237397)
Genome browser
AA seq
3176 aa
AA seq
DB search
MRGRRGRPPKQPAAPAAERCAPAPPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVA
PKTRLSSPRGGSSSRRKPPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGHLARTTPARRA
VNKVVYDDHESEEEEEEDMVSEEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDD
DDDASYCTESSFRSHSTYSSTPGRRKPRVHRPRSPILEEKDIPPLEFPKSSEDLMVPNEH
IMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLREEDTSN
TTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEYHHVLPYQEADDYPYGPVENKIK
VLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLE
EVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLIIEED
TENENEKKIWYYSTKVQLAELIDCLDKDYWEAELCKVLEEMREEIHRHMAITEDLTNKAR
GSNKSFLAAANEEILESIRAKKGEIDIVKSPEEIEKDNSETENNSKDAEKSREEFEDQSL
EKENDDKTPDDDPEQGKSEEPTEVGDKGNSVSANLDDNTTNASSEETSPSEGRSPVGCLS
ETHDSSNMAEKKVASELPQDVPEEPNKTCDSSNTSATTTSMQPNLENSNSSSELNSSQSE
SAKAADDPENGERESHTPVSIQEEIGDFKSEKSNGDISESPGGGRGTSGSTRIITRLRNP
DSKLSQLKNQQVAAAAHEANKLFKEGKEVLVVNSQGEISRLSTKKEVVMKGNINNYFKLG
QEGKYRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTI
STLRLTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVML
PIWRESLGHTRLHRMTSIEREEKEKVKKKEKKQEEEETMQQATWVKYTFPVKHQVWKQKG
EEYRVTGYGGWSWISKTHVYRFVPKLPGNTNVNYRNSLEGTKTNMDENMDESDRRRSPRS
PKKIKTEPDSEKGEVKDSDSAKGADKSEMDISKITEKDQDVKEVLDSDNDKSLKEEPMEI
DDGVKTESHINCQESSQVDVVNVSEGFHLRTSYKKKIKSSKLDGLLERRIKQFTLEEKQR
LEKMKLEGGIKGTGKTSTSSLKSLSESPIITKTKEGCQSDLLRQEQSPNVRNDKSEDFIR
GCSQSDSSILGISDPDHTTSKLYPKDQMLDDISIQSPGTNCQKQNSVGNDIDESLSEPSS
KGQEPSKIKRKGSDFLIDDSKLASADEIGTLIYKNEKPLIQEDNDTIVSPSQSPLLPSVS
KSTDNRDIPSLSKAVDFEGKLGCDSEYNSTLENSSDTMSVQDSSEEDMIVQNSNDSISEQ
FITQEQGIEGLEPLKHEFVSDKSTGNCDDRLQGKVTEANGKKPSQEQKLEERPVNKCSDQ
INLKSSSKKNNENRDSEKKGQKASTFQINGKDNKPKVYLKGECLKEISESKVVSGDVEPK
VNNISKIIPGNDIKSLTVKESAVKPFMNGDVIMEDFNEKNNLETNSCLLRSSDAEGDYQD
GLETLPIAKESESAPAATSPPSCLESSSTNQVEDMEIETSEVKKVTPSPITSGEESNLSN
DFVDENGLPTIKDESVNGESKRKTVITEVTTTTSTVATESKTVIKVAKGDKQTMVSSTEN
CAKSTVTTTTTTVTQLSTPSTGSSVDIISVKEQSKTVVTTTVTDSLTTAGGTLVTSMTVS
KEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFITKSSKKSIFVLPNDDLKKLARKGGIRE
VPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWASLRWDDMAAK
APPGGGTTRTETSETEITTTEIIKRRDVGPYGIRSEYCIRKIICPIGVPEAPKETPTPQR
KGLRSSALRPKRPETPKQTGPVIIETWVAEEELELWEIRAFAERVEKEKAQAVEQQAKVS
EQKKAEDLKAQMEAHLKQQRLAAQQKRLEQQKPTVISASTTSPTNSTTSTISPAQKVMVA
PLSGSVTTGTKMVLTTKVGSPATVTFQQNKNFHQTFATWVKQGQANSATSTAATSATTIA
STGQTFQITGNPVTMAGKVITKLPLPANSKIVAVNVPATQGGVVQVQQKVLGIIPSSTGT
SQQTFTSFQPRTATVTIRPNTSGSGGTTSTSQVITGPQIRPGMTVIRTPLQQSTLGKAII
RTPVMVQPGTPQQVVTQIIRGQPVSTAISAPNAVSSSPGQKGLPSGPSTANLQSSTSQSP
RPQQGQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTILPGPGQQLMQ
AAMPNGTVQRFLFTPLATTATTASTTTTTTVSTTAAGTSEQRQSKLSPPTQVQQAKTLPP
AQSSSVGPPEAQPPTAQPSAQPQPQTQPQSPAQPEVQTQPEVQPQTTVASHVPSEAQPTQ
AQSSKPQVAAQCQPQSNVQGQSPARVQSPPQTRIRPSTPSQVSPGQQAQVQTTTSQPIPI
QPHTSLQIPSQGQPQSQPQVQSSPQTLSSGQTLSQVTVPSPSRPQLQIQQPQPQVLAVPQ
LQQQVQVLSQIQSQVVAQIQAQQGGVPQQIKLQLPIQIQQSNPVQTHQIQNVVTVQAASV
QEQLQRVQQLRDQQQKKKQQQIEIKREHTLQASNQSEIIQKQVVMKHNAVIEHLKQKKTM
TPAEREENQRMIVCNQVMKYILDKIDKEEKQAAKKRKREESVEQKRSKQNATKLSALLFK
HKEQLKAEILKKRALLDKDLQIEVQEELKRDLKIKKEKEMVQATAVAATSPPPAPPPSPP
PPPPPQHSGPLATATATATATLPAASQKRKREEERDSSSKSKKKKMISTTSKETKKDTKL
YCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNDCKRAQEGSSEELYC
ICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTPLTE
KDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERIQRRYYEKLT
EFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKASRSHNNKLQSTAS
NT seq
9531 nt
NT seq
+upstream
nt +downstream
nt
atgaggggccggcggggcaggccgcccaagcagcccgcggctcccgctgcggagcgctgc
gccccggccccgccgccgccgcctccgccgccgcccacgtccggacccatcggggggctg
cgctcgcggcaccgcggcagcagtcggggcaggtgggccgccgcccaggctgaggtggcg
cccaagacgcggctgagctcgcccagggggggcagcagtagccggaggaagccgccgccg
ccgccgccgccggccccccccagcaccagcgccccgggccggggggggcgaggaggcggg
ggcggcaggacggggggcgggggcggccacctggcccggaccaccccggcccggagggcc
gtcaacaaagtggtgtacgatgaccacgagagcgaggaggaggaggaggaggacatggtc
tccgaggaggaggaggaggacggcgacgccgaggagacccaggattcggaggacgacgag
gaagatgagatggaagaggacgacgatgactccgattatccggaggagatggaagacgac
gacgacgacgccagttactgcacggaaagcagcttcaggagccatagcacctatagcagc
actccaggtaggcgaaaaccaagagttcatcggcctcgttctccaatattggaagaaaaa
gacatcccaccccttgaatttcccaagtcctctgaggatttaatggtgcctaatgagcat
ataatgaatgttattgccatttatgaggtactgcggaactttggcactgttttaaggtta
tctccttttcgctttgaggacttttgtgcagccttggtgagtcaagagcagtgtacactt
atggcggagatgcacgttgtgcttttgaaagcagtgttgcgtgaagaagacacttccaat
actacctttggacctgctgatctgaaagatagcgttaattccacgctgtatttcattgat
ggaatgacgtggccggaggtgctgcgggtgtactgtgagagtgacaaggaataccatcat
gttcttccttaccaagaagcagatgactatccttatggaccagtggagaacaaaatcaaa
gttctgcagttcttagtcgatcagtttctcaccacaaatattgctcgtgaggagttgatg
tctgaaggggtgatccagtatgatgaccattgtagggtttgtcacaaacttggggatttg
ctttgctgtgagacatgttcagcagtataccatttggaatgtgtgaaaccacctctcgag
gaggtgccagaggatgaatggcagtgtgaagtctgtgtggcacataaggtgcctggtgtg
actgactgtgttgctgaaatccaaaaaaacaaaccatatattcgacatgaacctattgga
tatgacagaagtcggaggaaatactggttcttaaaccgaagactcataatagaagaagat
acagaaaatgaaaatgaaaagaaaatttggtactacagcacaaaagtccagcttgcagaa
ttaattgactgtctcgacaaagattactgggaagcagaactctgcaaagttctggaagaa
atgcgagaggaaatccacaggcacatggccataaccgaagacctgaccaataaggctcgg
ggcagtaacaaatccttcctggcagcagctaatgaagaaattttggaatccataagagcc
aaaaagggagagattgatattgttaagagcccagaagaaatagaaaaggacaacagtgag
actgagaataactccaaagatgctgagaaaagcagagaggagtttgaagaccagtccctt
gaaaaagaaaatgatgataaaacaccagacgatgatcctgagcaaggaaaatctgaggag
ccaacagaagttggggataaaggtaactctgtatcagcaaatcttgacgacaacacaaca
aatgcttcttcagaagagactagtccctctgaagggaggagtcctgtggggtgtctttca
gaaacccatgatagcagcaacatggcagagaagaaggtggcatctgagctcccccaggac
gtgccagaagaacctaacaagacatgtgacagcagtaacactagtgctaccactacctcc
atgcagcctaatctggaaaacagtaacagcagcagtgaactaaattcttcccagagtgaa
tctgctaaggcagctgatgatcctgaaaatggagaaagagagtctcatacacctgtctct
attcaagaagagataggtgatttcaaatcagagaagtctaatggggacataagtgagtct
cctggaggtggaagaggaacctctggctcaactcgaatcatcaccaggttacggaacccg
gacagcaaacttagtcagttgaagaaccaacaggtggcagctgcagcacatgaagcaaat
aaattatttaaggagggcaaagaggtactggtagttaactctcaaggagaaatatcacgg
ctgagcaccaaaaaggaagtggtcatgaaaggaaatatcaacaattattttaagttgggt
caagaagggaagtatcgtgtctaccacaatcaatactccacaaattcatttgctctgaat
aagcaccagcacagagaagaccatgacaagagaaggcatcttgcacataagttctgtctg
actccagcaggagagttcaaatggaatggttctgtccatggctccaaagttctcacaata
tctaccctgagactgactatcacccaactggaaaacaatatcccttcatcctttcttcat
cccaactgggcttcacacagggcaaattggatcaaggcagttcagatgtgtagcaaaccc
agagaatttgcattggctttagcaattttggagtgtgcagttaaaccagttgtgatgcta
ccaatatggcgagaatctttaggacataccaggttacacaggatgacatcaattgaaaga
gaagaaaaagagaaagtcaaaaaaaaagagaagaaacaagaagaggaagaaacgatgcaa
caagctacatgggtaaaatatacatttccagttaaacatcaggtttggaaacaaaaagga
gaggaatacagagtaacaggatatggtggttggagctggattagtaaaactcatgtttat
aggtttgttcctaaattgccaggcaatactaacgtgaattacagaaactctttagaagga
accaaaactaatatggatgaaaacatggatgaatcagatagaagaagaagtccacgaagt
ccaaaaaaaataaaaacagagcctgattctgagaaaggcgaggtaaaagattcagattct
gcaaaaggagcagacaaaagtgaaatggacatttcaaagattactgagaaggaccaagat
gtaaaagaagtcctagattctgacaatgataaatcccttaaggaagaaccaatggaaata
gatgatggtgtgaaaacagagtcacatataaattgtcaggaaagttctcaagtagatgtg
gtcaatgtcagtgagggttttcatctaaggactagttataaaaagaaaattaaatcatcc
aaactagatggacttcttgaaaggagaattaaacagtttacattggaagaaaaacagcgc
ctcgaaaaaatgaagttggagggtggaattaagggtacaggaaagacctctacaagctct
ttgaaaagtctgtcagagtcaccaataataacaaaaacaaaagaagggtgtcaaagtgac
ttgcttagacaagagcaaagccctaatgtaaggaatgataaatctgaagactttattcga
ggatgttcacaaagtgattcctcaattctgggaatcagtgatcctgatcatacaacaagt
aaactttatccaaaagatcaaatgttagatgacatctccattcagagcccagggacaaac
tgtcagaaacaaaattctgttggaaatgacatagatgagagtctctctgaaccttccagt
aaaggtcaggaacccagtaagattaaaagaaaaggaagtgactttctcatcgatgattct
aaactagccagtgcagatgaaattggtactttgatctataagaacgaaaaaccactcata
caggaggataatgacaccattgtttctccttcccagagccctttacttccatcagtatct
aaaagtactgataatagagatatcccatctctgtcaaaagcagtggactttgaaggaaaa
ctgggatgtgactctgaatataatagcactttggaaaatagctctgatacgatgtctgtt
caagacagcagtgaagaagatatgattgttcagaatagcaatgacagcatttctgagcag
ttcataacccaagaacaaggtatcgaaggcttggaaccattgaaacatgaatttgtttca
gataagtccactggaaactgtgatgacaggctgcagggtaaggtaactgaagcaaatggt
aaaaaaccaagtcaagaacagaaattagaggagagaccagttaataaatgtagtgatcaa
ataaatctaaaaagtagcagcaaaaagaataatgaaaatcgagactctgaaaagaaagga
cagaaagcaagtacctttcaaataaatggaaaagataataaacctaaagtatatttgaaa
ggtgaatgcttaaaagaaatctctgagagtaaagtagtaagtggtgatgttgaaccaaag
gttaataatatcagtaaaataattcctggaaatgatattaagtctttgactgttaaagaa
tctgctgtaaagccattcatgaatggtgatgtcatcatggaagattttaatgaaaaaaac
aacttggaaacaaactcatgtttactgagatcttcagatgctgagggtgactaccaagat
ggcctagagaccctgccaatagccaaagagtctgagagtgcaccagctgccacatctcca
ccatcttgtctagaaagcagttcaacaaatcaggtagaagatatggaaattgaaacctca
gaagtgaagaaagttactccgtcacctattacttctggagaggaatcgaaccttagtaat
gattttgttgatgaaaatggtctgcccaccatcaaagatgaaagtgtcaatggagaatcg
aaaagaaaaacagtcatcacagaagtcaccaccaccacatccacagtggccacagaatca
aaaactgtaatcaaagtagcaaaaggcgataagcaaactatggtctcctccacagagaac
tgtgccaaatccactgtcacaaccaccactacaacagtaacacagctttccacaccctcc
acaggcagtagtgtggacatcatctctgtgaaggagcagagtaaaaccgtggtcacgacc
acagtgacagactcactaaccactgcagggggcactctggtaacatccatgacggtgagc
aaagaatattccacaagagacaaagtgaaactcatgaaattttcaagacccaagaagacc
cgttcaggtacagcactaccatcctatcgcaagtttatcaccaaaagcagcaagaagagc
atatttgttttgcctaatgatgacttaaaaaaattggccagaaaaggaggaatccgagaa
gtcccttattttaattacaatgctaaacctgccttggatatatggccatacccttctcct
agaccaacctttggtatcacgtggaggtatagacttcagactgttaagtccttggctgga
gtgagccttatgttgcggttactgtgggcaagtctgaggtgggatgacatggcagccaag
gcgcctccgggaggagggacgacacggacagaaacatctgaaactgaaatcacaacaaca
gaaatcattaagagacgagatgttggtccttacggcattcgatctgaatattgtatcaga
aaaatcatttgccccattggagttccagaggcaccaaaagaaacacctacacctcagagg
aaaggccttcgatcaagcgcattgcggccaaagagaccagaaactcccaagcaaactggc
cctgttattattgaaacctgggtagcagaagaagagttggaattatgggagatcagggcg
tttgctgagagagtggagaaagaaaaggcacaagcagttgagcaacaggctaaggttagt
gaacagaagaaggcagaggacctcaaggcccaaatggaggctcacctcaaacagcagcgc
ttggctgcccagcagaaacgattggaacagcagaagcctacagtaatttcagcttccact
acttccccaacaaacagtacaactagtaccatctctccagcacagaaagttatggtggcc
cccctaagtggctccgttacaacgggaactaaaatggtactaaccaccaaagttggatct
ccagctacagtaacattccagcagaacaagaacttccatcagacctttgctacctgggtc
aagcaaggccaggcaaattcagccaccagcacagctgccacatctgctacaaccattgcc
agcacaggtcagacgttccaaattacaggcaatccagtcactatggcaggaaaagtaatt
accaaactgccacttcctgcaaacagcaagattgtcgctgtaaatgtgccagcaacacaa
ggaggcgttgttcaagtacagcagaaagtcctggggatcattccatcaagtacaggtaca
agtcagcaaacctttacttcattccagcccaggacagcaacagtcacaattaggcccaat
acctcaggctctggaggaaccacaagcacttcacaagtaatcacagggcctcagatccgc
cctggtatgacagtgattagaacaccactccaacagtcaacactaggaaaggcaattatt
cgaacacctgtgatggtacagccaggtactcctcagcaagtggtgactcagatcatcaga
gggcagcctgtttccactgccatctctgcccctaatgcagtttcctcaagccctgggcag
aaaggcttaccttcaggaccatccactgcaaatctgcagtcgtcaacctcacaatcccct
cgtccccagcaaggacaggtgaagcttaccatggcacagctcacccagttaacacagggc
cacggtggcaatcaaggtttgacagtagtaattcaaggacaaggtcaaactacaggacag
ttgcagttgatacctcaaggggtgactatacttccaggtccaggacagcagctgatgcaa
gcagcgatgccaaatggtactgttcagcgcttcttgtttaccccactggcaacaacagcc
acaacggccagcaccaccaccaccaccaccgtttccactacagcagcaggtacaagtgag
caaaggcagagtaaattgtcacccccgacacaggtgcaacaagccaaaacactgccacca
gctcagtcatcaagtgtgggtcctccggaagcccagccaccgactgctcagccttcagct
cagccccagccacaaacccagccccaatccccagctcagcctgaagttcagactcagcct
gaagttcagccccaaacaactgttgcatcccatgtcccttctgaagcacaacccacccaa
gcacagtcatccaaaccccaagtcgcagcacagtgtcagcctcaaagtaatgtccaagga
cagtctcctgctcgcgtccagagtccaccacagactcgaatacgtccatcaactccatcc
caggtgtctcctggacagcaagcccaggttcagactacaacctcccaaccgattccaatt
cagccacatacatctcttcagataccttcccagggccagccacagtcacaaccccaggta
cagtcttcacctcaaactctttcatcaggacaaacgttaagtcaagttactgttccatcc
ccatcccgtcctcagctacaaatacagcagccacagccccaagtcctggctgtgcctcag
ctgcaacaacaagtccaggttctctctcagatccagtcgcaggttgtggctcagatacag
gctcagcaaggtggtgtgccccagcaaatcaaactccagttacctattcaaattcagcaa
agcaatcctgtacagactcaccagattcagaatgtggtcacagtgcaggcagccagtgtg
caagagcagttgcagagggttcagcaactcagggatcagcagcaaaagaagaaacagcaa
cagatagaaattaagcgggaacacaccctccaagcttctaaccaaagtgaaatcattcag
aaacaggtggtgatgaagcataatgctgtaatagaacatttaaaacagaaaaagaccatg
actccagctgaaagagaagagaatcaaagaatgattgtctgtaaccaggtgatgaagtat
attttggataagatagataaagaagaaaaacaagcagcaaaaaaacggaagcgcgaagag
agcgtggaacagaaacgtagcaagcagaatgctaccaagctttctgcactgctcttcaaa
cacaaagagcagctcaaagctgaaatcctgaaaaagagagctctcctggataaggaccta
caaattgaagtgcaggaagagctcaagagagacctgaaaattaagaaagaaaaagaaatg
gtgcaggccacagcagtagctgccacttccccgcctccggcccccccgccttcgcctccg
cctccgcctcccccacagcactcgggccctctggccacggccacggccacggccacggcc
acactgcctgcggcttcccagaagaggaagcgagaagaagaaagagactcaagctccaag
tccaagaagaagaaaatgatttctactacctcaaaggaaactaagaaggacacaaagctt
tactgtatctgtaaaacgccttatgatgaatctaagttctatattggctgtgatctttgt
actaactggtatcatggagaatgtgttggcatcacagaaaaggaggctaagaaaatggat
gtgtacatctgtaatgattgtaaacgggcacaagagggcagcagtgaggaattgtactgt
atctgcagaacaccttatgatgagtcacaattctatattggctgtgatcggtgtcagaat
tggtaccatgggcgctgcgttggcatcttgcagagtgaggcagagctcattgacgagtat
gtctgtccacagtgccagtcgacagaggatgccatgacagtgctcacgccgctgacagag
aaggactatgagggtttgaagagggtgctgcgctctttacaggcccataagatggcctgg
cctttccttgaaccagtggatcctaatgatgcaccagactactacggtgttattaaggaa
ccaatggaccttgccaccatggaagaaagaatacagagacgatattatgaaaagctgacg
gaatttgtggcagatatgaccaaaatttttgataactgtcgttactacaatccaagtgac
tcccctttttaccagtgtgcagaagttcttgaatcattctttgtacagaaattgaaagga
ttcaaagctagcaggtctcataacaacaaactgcagtctacagcttcttaa
DBGET
integrated database retrieval system
