Rhinolophus ferrumequinum (greater horseshoe bat): 117014911
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Entry
117014911 CDS
T07722
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04064
NF-kappa B signaling pathway
rfq04514
Cell adhesion molecules
rfq04668
TNF signaling pathway
rfq04670
Leukocyte transendothelial migration
rfq04933
AGE-RAGE signaling pathway in diabetic complications
rfq05143
African trypanosomiasis
rfq05144
Malaria
rfq05417
Lipid and atherosclerosis
rfq05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
117014911 (VCAM1)
04668 TNF signaling pathway
117014911 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117014911 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
117014911 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
117014911 (VCAM1)
05143 African trypanosomiasis
117014911 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
117014911 (VCAM1)
05418 Fluid shear stress and atherosclerosis
117014911 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
117014911 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rfq04090
]
117014911 (VCAM1)
04091 Lectins [BR:
rfq04091
]
117014911 (VCAM1)
CD molecules [BR:
rfq04090
]
Proteins
117014911 (VCAM1)
Lectins [BR:
rfq04091
]
I-type lectins (Siglecs)
117014911 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
C2-set
Ig_2
V-set
ICAM_N
C2-set_2
ICAM1_3_5_D2
Ig_4
Ig_5
C1-set
Ig_6
REJ
Motif
Other DBs
NCBI-GeneID:
117014911
NCBI-ProteinID:
XP_032949093
Ensembl:
ENSRFEG00010015274
LinkDB
All DBs
Position
22:36129758..36146407
Genome browser
AA seq
739 aa
AA seq
DB search
MPKKMVVIFGALNILWMVFAASQAFKIEISPESKIVAQIGASISLTCSTTGCESPSFSWR
TQIDSPLNGKVKNEETMSTLIMDPVSFGNEHSYLCTATCGTSKAEKGIQVHVYSFPKDPE
IHLSGPLEVGKPITVKCLVPDVYPFDRLEIEMWKGDRHLKNEEFLEPMETKSLETKSLEV
TFTPTNEDTGKELACQAKLHIDEIDGEPRERETTKKLQVYISPKNTVISVNPSTRLQESG
SVTMTCTSEGLPAPQIFWSKKLDNGSLQLLSENATLTLIAMRMEDSGIYVCEGVNLVGKN
VKEVELIVQEKLFTVEISPGPQIAAQIGDSVVLTCGVTGCESPSFSWRTQTDSSLSGKVR
SNGTTSTLTLSPVSFENEHSYLCTVTCGHKKKEKGIKVDVYSFSRDPEIEMSSLLVDGNL
INISCKVPNVYPSDRLEIELLKGESIMKKKTFLVDGHKKSLETKSLEMTFIPTTEDTGKV
LVCRAKLHIDEMEFELKQRQSTQTLHVNVAPKDINLTAFPSESVKEGDTVTIFCTCGNVP
QTWIILKKKAEAGDTVLKSTNGAYTIHKAQLEDAGVYECESKNEIGFQLTSITLDVKVPP
RNMTISIHPSRNVKEGDNITITCKTFSHPPAVITLKRVGVANDITMCSKNGTFTLYRVTQ
NDTGVYVISASNEAGDDSGRIEISVIRRENNKDYFSPELLVLYCASSLMIPAIGMIIYFA
RKANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaagatggtcgtgatctttggagccttgaatatactttggatggtgtttgca
gcttctcaagcttttaaaattgagatctcccctgaatccaaaattgttgctcagatcggt
gcctccatttcactgacttgcagcacaacgggctgtgagtctccatctttctcctggaga
acccagatagacagtccgctgaatgggaaggtgaaaaatgaggagaccatgtccacgctg
atcatggatcctgttagtttcgggaatgagcactcttacctgtgcacagcaacttgcgga
actagcaaagcagaaaaaggaatccaggtgcacgtctactcttttcctaaggacccagag
attcatttgagtggccctctggaggttggaaagccaatcacagtcaagtgtttggtccct
gatgtttacccatttgacaggctggagatagagatgtggaagggcgaccgtcacttgaaa
aatgaggaatttctggagcctatggagacaaagtctctggaaaccaagagtttggaagta
accttcactcctaccaatgaggatactggaaaagagcttgcttgccaagctaaattacat
attgatgaaattgatggtgagccccgcgaaagggagaccacaaaaaagctgcaagtctac
atctcacccaagaacacagttatctctgtgaatccctccacgaggctgcaagaaagtggc
tctgtgacaatgacatgtaccagtgaaggtctaccagctccacagattttctggagcaag
aaattagacaatgggagcctacagctcctttctgagaatgcaactctcactttgattgct
atgaggatggaagattctggaatttatgtttgtgaaggagttaacctggttgggaaaaat
gtgaaagaagtggaattaattgttcaagaaaaactgtttactgttgagatctcccctgga
ccccagattgctgctcagattggtgactcagttgtgttgacatgtggtgtcactggctgc
gagtctccatctttctcttggagaacccagacagacagttctctgagtggaaaggtgagg
agtaacgggaccacatccacactgaccttgagccctgtgagttttgagaatgaacattcg
tacctgtgcaccgtgacctgtgggcataagaaaaaggaaaagggaattaaggtggacgtc
tactcattctctagagatccagaaattgagatgagtagtctactagtggatggaaacctg
atcaatataagctgcaaggttcctaatgtgtatccttcagatcgtctggagattgaatta
cttaagggggagagtattatgaagaagaaaacctttttggtggacgggcataagaaatcc
ctagagaccaaaagtttggaaatgaccttcatccccaccactgaagatactggaaaagtt
cttgtttgtcgagctaagttacatattgatgaaatggaatttgagctcaaacagaggcag
agtacacagacacttcatgttaatgttgctccaaaagatataaatcttacagcttttcct
tctgagagcgtcaaggaaggagacactgtcactatcttctgtacatgtggaaatgttccc
caaacttggataatcctgaagaaaaaagcagaggcaggagacacagtgctaaagtctaca
aatggtgcatataccatccacaaggcccagttagaggatgcgggagtgtacgaatgtgaa
tctaaaaatgagattggcttccaattaacaagtataacacttgatgttaaagtacctcct
cgaaacatgacaatatcaatacatccttctagaaatgttaaagaaggggataatatcaca
attacatgtaaaacttttagtcatccgcctgcagtgattaccctgaaaagagttggtgtg
gccaatgacattactatgtgttcaaagaatgggacatttaccttgtatcgtgtcactcaa
aatgatacaggggtgtatgtaatcagtgcttccaatgaggctggggatgattctggacgg
attgagatctcagttatcagaagagaaaataacaaggactatttttctccggaacttctt
gtgctctattgtgcatcctccttaatgatacccgccattggaatgatcatttactttgct
agaaaagccaacatgaaggggtcatacagtcttgtagaagcacagaaatcaaaagtgtag
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