KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117015110
Entry
117015110         CDS       T07722                                 
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03018  RNA degradation
rfq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117015110 (LSM2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117015110 (LSM2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rfq03019]
    117015110 (LSM2)
   03041 Spliceosome [BR:rfq03041]
    117015110 (LSM2)
Messenger RNA biogenesis [BR:rfq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117015110 (LSM2)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     117015110 (LSM2)
Spliceosome [BR:rfq03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    117015110 (LSM2)
 Complex C
  U2 snRNP components
    117015110 (LSM2)
SSDB
Motif
Pfam: LSM SM-ATX DYW_deaminase
Other DBs
NCBI-GeneID: 117015110
NCBI-ProteinID: XP_032949383
Ensembl: ENSRFEG00010002680
UniProt: A0A671DWL7
LinkDB
Position
3:complement(2261516..2267356)
AA seq 95 aa
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq 288 nt   +upstreamnt  +downstreamnt
atgctcttctattcctttttcaagtcccttgtgggcaaggatgtggtcgtggaactcaag
aatgacctgagcatctgtggaaccctccattctgtggatcagtatctcaacatcaaatta
actgacattagtgtcacagaccctgagaaataccctcacatgttatcagtgaagaactgc
ttcatccggggctcggtggtccgctatgtgcagttgccagcagatgaggtggacacgcag
ttgctacaggacgcagcaaggaaggaggccttgcagcagaaacagtga

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