Rhinolophus ferrumequinum (greater horseshoe bat): 117015173
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Entry
117015173 CDS
T07722
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04330
Notch signaling pathway
rfq05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117015173 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117015173 (NCSTN)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
117015173
NCBI-ProteinID:
XP_032949523
Ensembl:
ENSRFEG00010017685
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All DBs
Position
22:complement(28203453..28217743)
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AA seq
710 aa
AA seq
DB search
MATAGGGASVAYLGCRDLLCLLSFCVLLAGLCGGNSVERKIYIPLNKTAPCVRLLNATHQ
IGCHSSISGDTGVIHVVEKEEDLQWVLTDGPNPPYVVLLEGTLFTRKVMEKLKASTSRIA
GLAVSLAKPSPASGFSPSVQCPNDGFGVYSNSYGPEFAHCREIQWNYLGNGLAYEDFSFP
IFLLEDENETNVIKQCYRDHNLSQNGSAPAFPLCAMQLFSHMHAVISTVTCMRRSSIQST
FSINPEIVCDPLSDYNVWSMLKPINVSGTLEPDDRVVVAATQLDSRSFFWNVAPGAESAV
ASFVTQLAAAEALHKAPDVTTLPRNVMFVFFQGETFDYIGSSRMVYDMEKGKFPVQLENI
DSFVELRQVALRNSLKLWMHTDPMSQKNESVRNQVEHLLTTLEKSGAGIPAIILQRPNQS
QPLPPSSLQRFLRARNISGVVLADHATIFHNRYYQSVYDTAENINVSYPERQSPEEDLNF
VTDTAKTLADVATVLGRTLYQLAGGSNFSDTIQADPQTVTRLLYGFLVRANNSWFQSILR
QDLRSYLGDGPLQHYIAVSSPTNTTYVVQCALANLTGKVTNLTREQCQDPSKVPNENKDL
YEYTWVQGPLNSNETERLPQCVRSTARLARALSPAFELGQWGSTEYSTWTESRWKDISAR
IFLIASKELEFITLTVGFGVLIFSLVITYCINAKADVLFIAPREPGAVSF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggccacggccgggggtggtgcctctgtggcttacctgggatgtcgggatcttctttgc
cttttgtctttctgcgtcctcctggcaggtttgtgcgggggaaactcagtggagaggaag
atctacattcccttaaataaaacagctccctgtgtccgtctgctcaatgccacccatcag
attggctgccattcttccattagtggggacacaggggttatccatgtagtggagaaagaa
gaggatctgcagtgggtgttgactgatggccccaaccccccttacgtggttctgctggag
ggcacgctctttaccaggaaggtgatggagaagctgaaggcgagtaccagtcgaattgcc
ggtcttgcagtgtccttagccaagcccagtcctgcctcaggcttctctcctagtgtgcag
tgtcccaatgatgggtttggtgtttactccaactcctatgggccagagtttgcgcactgc
agagaaatacagtggaactacctgggcaatggcttggcttatgaagactttagtttcccc
atctttcttcttgaagatgaaaacgaaaccaatgtcatcaaacagtgctatcgagatcac
aacctgagtcagaatggctcagcaccagccttcccactgtgtgccatgcagctcttctca
cacatgcatgctgttatcagcactgttacctgcatgcgacgcagctccatccagagcacc
tttagcatcaacccagaaatcgtctgtgatcccctgtctgactacaacgtatggagcatg
cttaagcctataaatgtatccgggacattagagcctgatgacagggttgtggtggctgcc
acccagctggacagtcgttcctttttctggaatgtggccccaggagctgagagtgctgtc
gcctccttcgtcactcagctggctgcagctgaagctttgcacaaggcacctgatgtgacc
accctgcctcgcaacgtcatgtttgtcttcttccaaggggaaacttttgactacattggc
agctcaagaatggtctatgatatggagaagggcaagtttcctgtgcagttagaaaacatt
gactcatttgtggagctgagacaggtggccttaagaaattcactaaagctttggatgcac
acagatcccatgtctcagaaaaatgagtctgtacggaaccaggtggagcatctcctgacc
acactggagaagagtggtgctggtatccctgctatcatcctccagaggccgaaccaatcg
cagcctcttccaccatcttctctgcagcgatttcttcgagctcgaaatatctctggtgtt
gttctcgctgaccatgctactatcttccataatcgctattaccagagcgtttacgacact
gctgagaacattaatgtgagctatccggaacggcagagccctgaggaagacctgaacttt
gtgacagacactgccaagaccttggcagatgtggccacagtgctgggacgtacactgtac
cagcttgcaggaggaagcaacttcagcgacaccattcaggctgatccccaaacagttacc
cgcctgctctatggctttctggttagagccaacaactcatggttccagtcaatcctcagg
caggacctaaggtcctacttgggtgatgggcctcttcagcattacatcgctgtctcaagc
cccaccaacaccacttacgttgtacagtgtgccttggcaaatttgactggcaaggtgacc
aaccttactcgagagcagtgccaggatccaagtaaagtccccaatgaaaacaaggatcta
tatgagtacacgtgggtccagggccctctgaactccaatgagacagaacggctgccccag
tgtgtgcgttccacagcacgactggccagggccttgtcccctgccttcgaactcgggcag
tggggctctactgagtactctacatggacagagagccgctggaaggacatcagcgcccgg
atatttctaatagccagcaaagagcttgagttcatcaccctgacagtgggcttcggcgtc
ctcatcttctctctcgtcatcacctactgcatcaatgccaaggccgatgtccttttcatt
gctccccgggaaccaggtgctgtgtctttctaa
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