Rhinolophus ferrumequinum (greater horseshoe bat): 117015190
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Entry
117015190 CDS
T07722
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03013
Nucleocytoplasmic transport
rfq05014
Amyotrophic lateral sclerosis
rfq05200
Pathways in cancer
rfq05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117015190 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117015190 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
117015190 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117015190 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117015190 (TPR)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117015190 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
YwqH-like
Imm70
DUF1192
Motif
Other DBs
NCBI-GeneID:
117015190
NCBI-ProteinID:
XP_032949561
Ensembl:
ENSRFEG00010011972
LinkDB
All DBs
Position
22:complement(17052864..17112923)
Genome browser
AA seq
2443 aa
AA seq
DB search
MPSSGSVSRSRQRGRPMASRSFDGSRRGSLRRVGAREPPGEVAEAAAQTSGSSWSSSFFS
VSAPSAAAAAAPGPSDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNSQLKALTEKNKELEIAQD
RNVAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESNATKGDLQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKSKTDELLALGREKGNEILELKC
NLENKKEEVSRLEEQMNGLKTSNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKEQMEKEMLD
KIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEATDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKISELQLKLE
SALTELEQLREARQHQKQLVDSIVRQRDMYRILLSQTTGVVIPLQASSLDDISLVSTPKR
SSTSQTVSTPTPVPIIESAEVIEAKAALKQLQEIFENYKKEKTDSEKIQNEQLEKFQDQV
TDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMT
QDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQG
ILERSETETKQRLSSQIEKLENEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTET
NLHLNTKELLKNAQKEITTLKQHLSNMEVQLASQSSQRTGKGQPNNKEDVDELLSQLRQT
EEQVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVHKNIEVRLKESAEFQTQL
EKKLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSTVQNEVQEALQRASTALSNEQQA
RRDCREQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQL
LECKASWEERERMLKDEVSKCVSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNV
SFSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNA
EREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDI
LPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVNQQKDPDTDEYRKLLSEKEVH
TKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLSKVKAEKESVQKDLDAKIIDI
QEKVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLN
QAEAKSKSLESQVENLQKALSEKETEARNFQEQAVQLQSELSRLRQDLQDRTTQEEQLRQ
QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKS
QYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSDP
PTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVE
SQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHP
QIEPANQELSPSIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASD
QVSDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYT
PMEDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDLVIVIDSDDEEEDDDENDGEHED
YEEDEEEDDDDEDDTGMGDEGDDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGG
GESNQRAADSQNSGEGNTGTAESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPR
LTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPH
RTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGELSLGLGMYETPLFL
AHEEESGGRSVPTTPLQVAAPVTVFTESTTADASEHASQSVPMVTTSTGTLSTANETAAG
DDGDEVFVEAESEGISSEAGLEIDSQQEEEPVQASDEADLPSTSQDPPSSSSGDTSSSQP
KPFRRVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtctagaagccgccaaagaggacgacccatggcatctcga
agctttgatgggtcccgccgcggaagtctccggcgggtcggagcgcgcgagccaccaggc
gaggtggcagaggcggccgcccagacttctgggtcctcctggtcttcgtctttcttctcc
gtttctgctccgtcggccgctgcggctgcagcccccggcccgagcgacatggcggcggtg
ttgcagcaagtcctggagcgcacggaattgaacaagctgcctaagtcggtccagaacaaa
cttgaaaagttcctggccgaccagcaatccgagatcgatgggctgaaggggcggcacgag
aaatttaaggtggagagcgaacaacagtactttgagatagagaagaggctgtcccacagt
caggagagacttgtgaatgaaaccagagagtgccaaagcttgcggcttgagctggagaag
ctcaacagtcaactcaaggcactaactgagaaaaacaaagaactagaaattgctcaggat
cgtaatgttgccattcagagccagtttacaaggacaaaggaagaattagaagctgagaaa
agagacttaattagaaccaatgagagactatctcaagaacttgaatatttaacagaggat
gttaaacgtctaaatgaaaaacttaaagaaagcaatgcaacaaagggcgatcttcagtta
aaactggatgaacttcaagcttctgatgtttctgttaagtatcgggaaaaacgtttggag
caagaaaaggaattgttacataatcagaatacatggctgaatacagagttgaaatccaaa
actgatgaacttctggctcttggcagagaaaaaggaaatgagattctagagcttaaatgt
aaccttgaaaacaagaaagaggaggtttctagactggaagaacagatgaatggcttgaaa
acgtcaaatgagaatcttcaaaagcatgtagaggatctgttgaccaaactgaaagaggca
aaggagcagcaggccagtatggaagagaaattccacaatgaattaaatgctcacataaaa
ctgtctaacctatacaagagtgctgctgatgactcagaggcaaagagcaatgaactgacc
cgagcagtggacgaactacacaaacttttgaaagaagctggagaagcaaataaagcaata
caagatcatcttctagaggtggaagaatcgaaagaacaaatggaaaaagaaatgcttgat
aagatagggaaactggagaaggaattagagaatgcaaatgacctgctttctgccacaaaa
cgtaaaggagccatattatctgaagaagagcttgcagccatgtctcctactgccgcagcc
gtagctaagatagtgaaacctggcatgaagttaactgagctgtataatgcttatgtggaa
actcaggatcagttgcttttggagaaactagaaaacaaaagaattaataagtacttagat
gaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccagagggaggagtat
gaacgtgcacagaaagctgtggcaagtttatctgttaagcttgaacaagctatgaaggag
attcagcgtttgcaggaggccactgataaagccaacaaacattcgtctgtacttgaaaga
gacaatcagcgaatggaaatacagataaaagatctttcacaacagattagagtgcttttg
atggaacttgaagaagccaggggtaaccatgtaattcgtgatgaggaagtaagctctgct
gatataagcagttcatctgaagtgatatcccagcatctagtatcttacagaaatattgaa
gagcttcaacagcaaaatcaacgtcttttagtggctcttagggaacttggggaaaccaga
gaacgagaagaacaagaaacaacttcatctaagatcagtgagcttcagctcaaacttgag
agcgccctcactgaactggaacaactccgtgaggcacgacaacatcagaagcagcttgtt
gattccatagttcgtcagcgtgatatgtaccgtattttgttgtcacaaacaacaggagtt
gtcattcctttacaagcttcaagcttagacgatatttctcttgtgtcaactccaaaacgt
tcaagtacatcacagactgtttccactcctactccagtacctataattgagtcagcagag
gtaatcgaagccaaggctgcccttaaacagttgcaggaaatttttgaaaactataaaaaa
gaaaagacggatagtgaaaaaatacaaaatgagcagcttgagaaatttcaggatcaagtc
acagatctgcgatcacaaaacactaaaatttctacccagctagattttgcttctaaacgt
tatgaaatgttgcaagataacgttgaaggatatcgccgagaaataacctccctacatgag
agaaatcagaaactcactgcaacaactcaaaagcaagaacagatcatcaatacaatgacg
caagatttgagaggagcaaatgaaaagctagctgttgcagaagtaagagcagaaaatttg
aaaaaggaaaaggaaatgcttaaattgtcagaagttcgtctttctcaacaaagagagtct
ctgttagctgaacaaagagggcaaaacttgctgctaactaatctgcaaacaattcaggga
atactagagcgatctgaaacggaaaccaaacaaaggcttagtagccagatagaaaaactg
gaaaatgagatatctcatctaaaaaagaagttggaaaatgaggtggaacaaaggcatacg
cttactagaaatctagatgttcaacttttagatacgaagagacagctggatactgagaca
aatcttcatcttaatacaaaagagctattaaaaaatgcccaaaaggaaattactacattg
aaacagcaccttagtaacatggaggtccagcttgcttctcagtcctcgcagagaactggt
aaaggtcagcctaacaacaaagaagatgtggatgaacttctaagtcaactaaggcaaaca
gaagagcaggtgaacgatttgaaggagagactcaaaacaagtactagtaatgtggaacag
tatcgagcaatggttactagtttagaagaatccctcaataaggaaaaacaggtaacagaa
gaagtacataaaaatatcgaagttcgtttaaaagagtcagctgaatttcagacacagttg
gaaaagaagttgatggaagtagagaaggaaaaacaggaacttcaggatgacaagagaaaa
gccatagagagcatggaacaacagttatctgagttaaagaaaacacttagtactgttcag
aatgaagtacaagaagctcttcagagagcaagcacagctttgagtaatgaacagcaagcc
agacgtgattgtcgggaacaagctaaaatagctgtggaagctcagaataagtatgagaga
gaactcatgctgcacgctgccgatgtggaagcactgcaagctgccaaggaacaggtttcc
aaaatggcatcagtccgtcaacatttggaagaaacaacccagaaagcagagtcacagttg
ttggagtgtaaagcatcttgggaggaacgagagagaatgttaaaggatgaagtttccaag
tgtgtgtctcgctgtgaagatctagagaaacaaaatagattgcttcatgatcagattgaa
aaattaagtgacaaggtggttgcctctgtgaaggaaggtgtacaaggtccattgaatgta
tcgttcagtgaagaaggaaaatctcaagaacaaattttagaaattctcagatttatacga
cgagaaaaagaaattgctgaaacaaggtttgaggtggctcaggttgagagtctacgttat
cgacaaagggttgaacttttagaaagagagctgcaggagctgcaggatagtctcaatgct
gaaagggagaaagtccaggtaactgcaaaaacaatggcccagcatgaggaactcatgaag
aaaactgaaacaatgaacgtagttatggaaaccaataaaatgctgagagaagaaaaggag
aggctagaacaggatctacagcagatgcaagcaaaggtgaggaaactggaattagatatt
ttacccttacaagaagcaaatgctgagctgagtgagaaaagcggtatgttgcaagcagag
aagaagttattagaagaagatgtcaaacgttggaaagcacgtaaccagcatctagtaaat
caacagaaagatccagatacagatgaatatcggaagctcctttctgaaaaggaagttcat
actaagcgtattcaacagttaactgaagaaattgggagacttaaagctgagattgcaaga
tcaaatgcatctttgactaacaatcagaacttaatccagagtctaaaggaagatttaagt
aaagtaaaagctgaaaaggaaagtgtccagaaggacttagatgccaaaataattgatatc
caagaaaaagtcaaaactattactcaagtcaagaaaattggacgtaggtacaagactcaa
tatgaagaactaaaagcacaacaggataaggtcatggagacctcagctcagtcttctgga
gaccatcaggaacagcatgtctcagttcaggaaatgcaggagctcaaagaaacccttaac
caagctgaagcaaagtcaaaatcacttgagagtcaagtagagaatctgcagaaggcattg
tctgaaaaagagacggaagcacgaaatttccaagaacaggctgtgcagcttcaatcagaa
ctttcacgacttcgtcaggatcttcaagatagaaccacacaggaggagcagctccgacag
cagataactgaaaaggaagagaaaacaagaaaggctattgtagcagcgaaatcaaaaatt
gcacatttagctggcgttaaagatcagctaactaaagaaaatgaggagcttaaacaaagg
aacggagccttagatcagcagaaagatgaattggatgttcgtatgactgctcttaagtcc
caatatgaaggtcgaattagtcgcttggaaagagaactcagggagcatcaagagagacac
cttgagcagagagatgagcctcaagaacctactaataaggtcccagaacagcagagacag
atcaccttgaaaacaactccagcttctggtgaaagaggaattgccagcacatcagatcca
ccaacagctaatatcaagccaactcctgttgtgtctactccaagtaaagtgacagctgca
gctatggctggaaataagtcaacacccagggccagtatccgcccaatggttacacctgca
accgttacaaatcctactactactccaacagcaacagtgatgcccactacacaagtggaa
tcacaagaagctatgcaatcagaaggacctgtggaacatgttccagtttttggaagcaca
agtggatctgttcgttctactagtcctaatgtccagccttctatccctcaacccatttta
actgtccagcagcaaacacaggctacggcttttgtgcaacccactcaacagagtcatcct
cagattgagcctgcaaatcaagagctgtctccaagcatagtagaggtggttcagagttcg
ccagttgagcggccttctacttccacggcagtatttggcactgtgtcggctaccccaagt
tcttctttgccgaagcgtacacgtgaagaggaagaggatagcaccatagaagcatcagac
caggtctctgatgatacagtggaaatgcctcttccaaagaaattgaaaagtgttacacct
gtaggaactgaggaagaagttatggcagaagaaagtactgatggagaggtagagacacaa
gtatacaaccaagattctcaagattccattggagaaggagtgactcagggagattatact
ccaatggaagacagtgaagaaacctctcagtctttacaaatagaccttggaccccttcag
tcagatcagcaaacaacaacttcgtcccaagatggtcaaggcaaaggagatcttgtcata
gtaattgacagtgatgatgaagaggaggatgatgatgaaaatgatggcgaacatgaggat
tatgaagaagatgaagaagaggatgatgacgacgaagatgacacagggatgggcgacgag
ggtgatgatagtaacgaaggcaccggtagtgcagatggcaatgatggatatgaagctgat
gatgctgagggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtgga
ggtgaaagtaatcagagagctgctgattctcaaaacagcggtgaaggaaatacaggtact
gcagagtcctcattttcccaggagatttctagagaacaacagccatcatcagcatctgaa
agacagacccctcgtgcacctcagtcccctagacggccaccacacccactacccccaaga
ttgaccattcatgcgccacctcaagagttgggaccaccagtgcagagaattcagatgact
aggaggcagtctgtaggacgtgggcttcagctgacaccaggaatcggtggcatgcagcag
catttttttgacgatgaagatagaacagtgccaagtacccctactcttgtggtgccacat
cgtactgatggattcgctgaggcaattcattccccacaggttgctggtgttcctagattc
cgatttgggccacctgaagatatgccacagacaagttctagtcactctgatcttggccag
cttgcttctcaaggagaattgtctttaggtttgggaatgtatgaaacaccactcttccta
gctcatgaagaagagtcgggtggccgaagtgttcccacaactcccctgcaagtagcagcc
ccagtgaccgtgtttactgagagcaccaccgctgacgcttcggagcatgcctctcagtcg
gttcccatggtgacaacatcgactggcactctgtccacagccaatgaaacggcagccggt
gacgacggagatgaagtattcgtggaggcggaatcagaaggtattagttcagaagcaggc
ctggaaattgacagccagcaggaagaagagcctgtccaggcatctgacgaggcagatctt
ccttccaccagccaggatcctccttccagctcttctggagataccagcagtagtcaacca
aagcctttcagacgagtaagacttcagacaacattgagacaaggtgtccgtggtcgtcag
tttaacagacagagaggtgtgagccatgcaatgggagggagaggaggcataaatagagga
aatattaattaa
DBGET
integrated database retrieval system
