Rhinolophus ferrumequinum (greater horseshoe bat): 117016331
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Entry
117016331 CDS
T07722
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rfq03041
]
117016331 (RBM39)
Spliceosome [BR:
rfq03041
]
Common components
Common spliceosomal components
General mRNP proteins
117016331 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
117016331
NCBI-ProteinID:
XP_032951443
Ensembl:
ENSRFEG00010016851
LinkDB
All DBs
Position
23:19791524..19818488
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AA seq
524 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCF
QLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA
AVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaatggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagtaaaagtaaggaacggaagcgaagcagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagtcgctcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgctcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaggaaagagatgctaggacagttttctgcatgcagctg
gcagcaagaattcggccaagggatctggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatatctgatagaaattcaagacgttccaagggaattgcttacgtggag
tttgttgatgtaagctcagtgcctctagcaataggattaactggccaacgtgttttagga
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatctgcaaaagggaagtgctggacctatgaggctttatgtgggctcattacactttaac
ataactgaagatatgcttcgggggatctttgagccttttggaaggattgaaagtatacaa
ctcatgatggatagtgaaacaggtcgatccaagggatacggatttattacgttttctgat
tcagaatgtgccaagaaggctttggaacaacttaatggatttgagttagcaggaaggcca
atgaaagttggccatgttactgaacgtactgatgcttccagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgatttgggaacaactggtcgtctccaattaatg
gcaagacttgcagagggtacgggtttgcagatcccaccagcagcacagcaagctctacaa
atgagtggctctttggcatttggtgctgtggcagatttgcaaacaagactttcccaacag
actgaagcttcagctttagctgcagctgcctctgttcaacctctcgcaacacaatgtttt
caactctctaacatgtttaaccctcaaacagaagaagaagttggatgggatacagagatt
aaggatgatgtgattgaagaatgtaataaacatggaggagttattcatatttacgttgac
aaaaattcagctcagggcaatgtgtatgtgaagtgcccatcaattgctgcagccattgct
gctgtcaatgcattgcatggcaggtggtttgctggtaaaatgataacagcagcatatgta
cctcttccaacttatcacaacctctttcctgattctatgacagcaacacaactactggtt
ccaagtagacgatga
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