Rhinolophus ferrumequinum (greater horseshoe bat): 117016428
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Entry
117016428 CDS
T07722
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rfq01002
]
117016428 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rfq04121
]
117016428 (USP42)
Enzymes [BR:
rfq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117016428 (USP42)
Peptidases and inhibitors [BR:
rfq01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117016428 (USP42)
Ubiquitin system [BR:
rfq04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117016428 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
MKLP1_Arf_bdg
Motif
Other DBs
NCBI-GeneID:
117016428
NCBI-ProteinID:
XP_032951547
Ensembl:
ENSRFEG00010009774
UniProt:
A0A671EM86
LinkDB
All DBs
Position
24:40948193..40982124
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AA seq
1333 aa
AA seq
DB search
MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVADKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHSAHSPGQSSPRPVIGQRVVNNKPATSGFIGPQLPSHMIKNPPHLNGTGPLKETPSSS
MSSPNGNSNVNRAGPVNASTSVQNWSVNRSSVIPEHPKKQKITISIHNKLPVRQGQSQPN
LHSNSLENPNKPVPSSTITNSSAIQSTSSAPTASVSSKVTKHMAPPESCSKPVMNGKSKL
NPSVLVPYGAESSEESDEEAKGLGRENGLGTVESSHSSAQDAEDDEVSGHELREPVTLNG
ANSTDSDPKENGMSFDGASCQIQPAAHSENPFSKANGLPGKLMPAPLPPLPEDKILETFK
LANKVKGSTDETSAPGTEESPAEDEKARLEPGSPTPGSPEKMETVPSLSSKLKKALPPSD
HCMKSTKEEVSENVLAEPAEALPGISHLCDASQITIGDDQLSIPCGPGNLASDQSRAPQE
MKGTLIESPQDSAAVEATGRLSLSPSSCPVDDGEQGTSVHSSRDKCMASEDPPVSTGTSA
DEPHRPQLDTAAESHSVGGPEQSSGERCEENKAGLQVQDRSPVTEKIGSLRKVDRGHYRN
RRERSSSGERARDSRSRTEDHCHRRRHSYTRERERAPHDRYRPEHCNGAQYQPCHSERLS
PSQHRAPARYSHHHARHRGGSHQDWSRYHHADSERSWGREKCYPGKLRWDQSRHFHDRYA
PYTAREVRDWKPFHGDRGYDKAAQYGGWPFKDCYKSRRGAELLAKEKERHHFGSPRAGLP
HALPPYPDKYSHEKIALVAEDTCHLADRFRDHENVKSRKRRYDSAEHDSFVEKKAWRSLQ
RDPIEEPKVKKHKKSKKKKKSKDKHRERDSRHQQDSDLSGAYSDADLHRHKKKKKKKKRH
SRKSEDFGKDSEPHLAKAASSETVDHFRTNDGGFPLTDGLPLEGFGPFREKTKHLRMESR
DDRCHLSECGQGD
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcagcctatcagaatcagcct
ggcagttctgaggcagtctcaccgggagacatggatgcaggttctgccagctggggtgct
gtgtcttcgttaaatgatgtttcaaatcacacgctttctttaggaccagtacctggtgct
gtagtttattcaagttcatctgtagctgataaatcaaagccatcaccacaaaaggatcaa
gccctcggtgatggcattgctcctccacaaaaagttctttttccatctgagaagatttgt
cttaagtggcaacagactcatagagttggagctgggctccagaacttgggcaatacctgt
tttgccaatgcagcattgcagtgtttaacttacacaccacctctcgccaattatatgcta
tcacatgaacactccaagacatgtcatgctgaaggattttgtatgatgtgtacaatgcaa
gcacatattacccaggcactcagtaatcctggggatgttattaaaccgatgtttgtcatt
aatgagatgcggcgtatagctaggcacttccgttttggaaaccaagaagatgcccatgag
ttccttcagtacactgttgatgctatgcagaaagcatgcttgaacggcagcaataaatta
gacagacacacccaggctaccacactcgtgtgtcagatatttggaggctacctaagatcc
agagtcaaatgtttaaattgcaaaggtgtttctgatacttttgatccatatcttgatata
acattggagataaaggctgctcagagtgtgaacaaggcgctggagcagtttgtgaagccg
gagcagctggacggagaaaactcatacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagaggttcactatacaccgatcctccaatgttcttacactttctctgaaacgcttt
gcaaattttactggaggaaaaattgctaaggatgtgaaatatcctgagtatcttgatatt
cgaccatacatgtctcaaccaaatggagaaccgattatttatgttttgtatgcagtgctg
gtacacactggttttaattgccatgctggccattatttctgctacataaaagctagcaat
ggcctctggtatcagatgaatgattccatcgtatctaccagtgatattagatcggtactc
agtcaacaagcctatgttctcttttatatcaggtcccacgatgtgaaaaacggaggtgaa
cttactcattccgcccacagccccggccagtcttctccccgacctgtgatcggtcagcgg
gttgtcaacaacaagccggccacgtcaggctttatcggaccacagcttccttctcacatg
ataaagaatccacctcacttaaacgggactgggccattgaaagaaacgccgagcagttct
atgtcgagtcctaatgggaactccaatgtcaacagggctggtcctgttaatgcttcaact
tctgttcaaaactggtcagtgaacaggtcctcggttattccagaacatcccaagaaacaa
aaaatcacaatcagtattcacaacaagttacctgttcgtcaaggtcagtctcagcctaat
cttcacagcaattctttggagaatcctaacaagcctgtcccctcttctaccatcaccaat
tcttctgcaatacagtctacctcgagtgcacctacggcatcagtttccagtaaagtcaca
aagcacatggccccacctgagtcctgttccaagccagtgatgaacggcaagtccaagctg
aacccaagtgtcctggtcccctatggtgccgagtcatctgaagagtctgacgaggaggca
aagggcctaggcagggagaacgggctagggacggtcgagagctcacactcttctgctcag
gacgctgaagacgacgaggtctctgggcacgagcttcgagaacctgttactctaaatggt
gctaatagtacagatagcgacccgaaagaaaacggtatgtcgtttgatggtgccagttgc
caaatccagcctgctgcacactccgaaaaccccttttctaaggcaaatggtctacctgga
aagttgatgcccgctcctttgccacctctcccagaagacaaaatcttagagaccttcaaa
cttgctaacaaagtgaaaggctccacagatgaaacaagtgcacctggaacagaggaaagc
cctgcagaggacgagaaggcaagactggagcctggcagccccactcctggttccccagag
aaaatggagacagtcccgagtcttagcagcaaattgaagaaggctttgccgccttcggac
cactgcatgaaatctaccaaagaagaagtctctgaaaacgttttggcagaacctgccgag
gctttgccgggtatcagccatctttgtgacgccagccagattaccatcggggacgatcaa
ctgtctataccatgtggccctgggaatttagcaagtgatcagagcagagcaccccaagaa
atgaaagggacgttaatagagagtccccaggactcggctgcagtggaggccacggggagg
ttgagtctgagtccctcgtcctgtcccgtggatgacggtgagcagggtacctccgttcac
agcagccgagacaagtgcatggcctcagaggacccgcctgtcagcacggggacctctgcg
gatgagccacatcgtcctcagttggacacggccgcagaaagtcattcagtggggggcccc
gaacagagttctggtgagcgatgtgaagaaaataaggctgggctgcaagtccaggatcgc
tctccggtcacggaaaaaatcggcagcctcagaaaagtcgaccggggccattaccgcaac
cggagagagcgctcgtccagcggggaacgcgcgagggacagcaggagcaggacggaggac
cactgtcaccggcggcggcactcctacacgcgcgagcgcgagcgggccccacacgaccgc
taccggccagagcactgcaacggggcccagtaccagccctgccacagcgagaggctcagc
cccagccagcaccgcgcccctgccaggtacagccaccaccacgcccgacaccgcggcggg
tcccaccaggactggagccgctaccaccacgcagacagtgagcgctcctggggccgggag
aagtgctacccaggaaaactgaggtgggaccagtccaggcacttccacgacaggtacgcg
ccatacacggccagggaggtgcgggactggaagcctttccacggggaccggggctacgac
aaggcggcccagtacggcggctggccgttcaaggactgctataaaagcagacggggcgcg
gagctgcttgctaaggagaaggagcggcaccatttcggcagcccgcgagcaggcctcccg
cacgccctgcccccctaccctgacaagtactcccacgagaagattgcactagtcgctgaa
gacacttgtcacctcgctgatcggtttcgtgatcacgaaaatgtcaagtcacgaaagcgc
aggtacgatagtgcagaacatgacagtttcgtagaaaagaaagcctggagaagcttacaa
agggaccctatagaagagcctaaggtgaagaagcacaaaaaatcaaagaagaaaaagaaa
tccaaagacaaacaccgagagcgagactccaggcaccagcaggactcagatctttccggc
gcgtactcggatgctgacctccacagacacaaaaagaagaagaagaaaaagaagagacac
tcaaggaaatccgaggactttgggaaagactcagaaccacacttagcgaaggccgccagc
tctgagactgttgaccatttccggacaaatgatggcggttttcccctcactgatggcctg
cctctggaaggttttggacctttccgtgaaaaaacaaaacatttaaggatggaaagcagg
gacgacaggtgtcatctgtctgagtgtggccagggtgattga
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