Rhinolophus ferrumequinum (greater horseshoe bat): 117016826
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Entry
117016826 CDS
T07722
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03440
Homologous recombination
rfq03450
Non-homologous end-joining
rfq04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117016826 (RAD50)
03450 Non-homologous end-joining
117016826 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117016826 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfq03032
]
117016826 (RAD50)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117016826 (RAD50)
DNA replication proteins [BR:
rfq03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
117016826 (RAD50)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
117016826 (RAD50)
BRCA1-C complex
117016826 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
117016826 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ABC_tran
AAA_29
DUF2703
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
117016826
NCBI-ProteinID:
XP_032952443
Ensembl:
ENSRFEG00010017143
UniProt:
A0A671FQ02
LinkDB
All DBs
Position
24:8872935..8953848
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFTPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDDIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITNKEAQLRSSKEI
VKSYENELDPLKNRLKEIEQNLSKVMKLDNEIKALESRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QENIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVRERQEREAETLSQLMNDFAE
KETLKQKQIDEIRDKKIGLGRIIELKSEILSKKQNELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNNNVETLKTEVISLQYEKADLDRTLRKLDQEMEQLNHHTTTRTQLEM
LTRDKADKDEQIRKIKSRHSDELNSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKD
LASAEQNKNHINNELKRKEEQLSNYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDDNQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESDLK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSVTNELKSEKLQISTNLQRRQQLEEQSVELSTEVQS
LHREIKDAKEQVGPLEITLEKLQQEKEELIYKKNTSNKVTQDKMNDIKEKVKNIHVYVKN
IENYIQDGKDDYKKQKETELNKVILQLSECEQHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQELESKIDNIKRNHSLATGRQTG
YEEEIIRFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYMEKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagtattcttggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcactcctctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagatttccctcctgga
accaaagggaatacatttgttcacgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagagctcgtagctgtgcagagatccatg
gtgtgtactcagaaaagcaaaaagaccgaatttaaaaccctggaaggagtcattactaga
acaaagcatggcgaaaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttgtcttggggtttccaagtctgtgctgaataatgtcattttctgtcatcaagaa
gattctaattggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgacattttt
tcagcaacaaggtacattaaagccttggaaactcttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatacctgaagcaaaataaggaaaaagct
tgtgagattcgcgatcagattactaataaggaagctcagttaagatcttcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaagtaatgaaacttgacaatgaaattaaagccttggaaagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggagc
gatgagcaactaaatgacttatatcacaatcaccagagaacagtaagggagaaagaaagg
agactggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgttgaacagggtcgtcttcagctgcaagcagatcgccat
caagaaaatatccgagctagagattcattaatccaatctttggcaacacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacagattaaaaattttcacaaacttgtg
agagagagacaagaaagggaagcagaaactctcagccaactgatgaatgattttgcagaa
aaagaaactctgaaacaaaaacagatagatgagataagggataagaaaattggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgaaaaatgtg
aagtatgaattacagcagttggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacgtgagctaagcaaggctgagaaaaacaacaatgtagaaactcta
aaaacagaagtaataagtcttcaatatgagaaagcagacctggacaggaccctgcgtaaa
ttggaccaggagatggagcagttaaaccatcatacaacaacacgcacccagctggagatg
ctgaccagagacaaagctgacaaagatgaacaaatcagaaaaataaaatctagacacagt
gatgaattaaattcattattagggtattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaggat
ctagcttcagctgagcaaaataaaaatcatataaataatgagctaaaaaggaaggaagag
cagttgtccaattatgaagataagctgtttgatgtttgtggtagccaggatttcgaaagt
gatttagacagacttaaagaagaaattgaaaagtcctcaaaacaacgagccatgctggct
ggagccacagcagtttactcccaattcatcactcagctaacggatgacaatcagtcctgt
tgccccgtctgtcagagagtatttcagacagaagctgaattacaagaagtcatcagtgat
ttgcaatctaagctgaggcttgctccagataaactcaaatcaacagaatcagatctaaag
aaaaaagaaaaacggcgtgatgaaatgctggggcttgtgcccatgaggcaaagcataatt
gatttgaaagagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcctaaagaatgacatagaagaacaggaaacactcttgggtacaataatgcct
gaagaagaaagtgctaaagtgtgtctgacagatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctacaaggattagac
ttggatagaactgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaaattggat
acagtttccagtaagattgaattgaatcgtaagcttatccaggaccagcaggaacagatt
cagcacctaaaaagtgtcacaaatgaactcaaatcagagaaacttcagatatcaactaat
ttacaacgtcgtcagcaactggaggagcagtctgtggaattatccactgaagttcagtcc
ttacacagagagataaaggatgctaaagagcaggtaggccctttggaaataacattggaa
aagttacagcaggaaaaagaagaattaatctacaaaaaaaatacaagcaacaaagtaaca
caggataaaatgaatgatattaaagagaaggttaaaaatattcatgtttatgtgaaaaac
attgagaattacattcaagatgggaaagacgactataagaagcaaaaagaaactgaactt
aataaagtaatacttcaactaagtgaatgtgagcaacacaaagaaaagataaataaggaa
atgggaatcatgaggcaagatatcgatacacaaaagatacaagaaagatggctgcaggat
aaccttacgttaagaaaaagaaatgaagaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaagttttacaaatgaaaaatgaacatcaggaattg
gaatcaaaaatagacaacataaaaagaaatcacagtttggcaacagggcgacagacaggt
tatgaggaagaaattattcgttttaagaaagagcttcgagaacctcaatttcgagatgct
gaggaaaagtatagagaaatgatgattgttatgagaacaacagagcttgtgaataaggat
ctggacatttattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaataaaatcattcgtgacctttggcgcagtacctatcgcggacaagatatc
gaatatatagaaattcggtctgatgccgatgaaaacgtatcagcttctgataaaaggcgg
aattataactaccgagtggtgatgctgaagggagacacagcattggatatgcgaggacga
tgcagtgccggacaaaaggtgttagcctcgctcattattcgcctggctctggctgagacg
ttctgcttgaactgtggaatccttgctttggatgagccaacaacaaatcttgatcgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacaacaacgt
aacttccagcttctggtaatcactcacgatgaagattttgtggagctcttagggcgatct
gaatatatggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
aaatgcagtgttagctccctgggatcttatgttcattaa
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integrated database retrieval system
