Rhinolophus ferrumequinum (greater horseshoe bat): 117017096
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Entry
117017096 CDS
T07722
Symbol
PCDHB8
Name
(RefSeq) protocadherin beta-8
KO
K16494
protocadherin beta
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rfq04515
]
117017096 (PCDHB8)
Cell adhesion molecules [BR:
rfq04515
]
Cadherins
Protocadherins
117017096 (PCDHB8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
117017096
NCBI-ProteinID:
XP_032952914
Ensembl:
ENSRFEG00010006014
UniProt:
A0A671E610
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Position
24:15568317..15572478
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AA seq
798 aa
AA seq
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MEASWKIICKQRQVLFLFLFLALSQAGTEPRRYSVVEETEGSSIVTNLAKDLDLSQSELS
RRGARVISKGNKLHLQLDQETGYLLLNEKLDREELCGHTEPCVLRFQVLLENPLQFFQAE
LQVIDINDHAPVFVERDMLLKISESSPPGTAFPLRNAQDVDVGRNNIESYIISPNPYFRV
LTRKRSDGRKYPELVLDKALDREEEPELRLTLIAQDGGSPPRSGTAQVYIEVIDINDNAP
EFEQPLYSVQIPEDSPIGFLIVRVSATDVDVGVNGEISYSLFQASEEIRKTFEINPMTGD
IRLKKHLDFETVQSYEVNIEARDAGNLFGKCTVLTRVLDVNDNAPEVTMSALTRQIPENS
PETVVAVYSVSDLDSEENGKVSCSIQDDLPFFLKSSLENFYTLVTERPLDRESRDEYNIT
ITVTDLGTPRLKTQKNITVIVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDA
GANAQVTYSLLPPQDPHLPLASLVSINADNGQLFALRALDYEALQALEFRVGATDRGSPA
LSSQALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVSKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPEAAADPAQADPLTVYLVIALASVSSLFLFSVLAFVAARLCRRGRAA
SLGGCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTGGLGASEFKFLKPVVPNSQGHYPG
PEIEENTNFGNDFGFSIQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagctggaagatcatttgcaaacaaaggcaagtcctttttctctttctcttc
ttggccttatctcaggcgggcactgaacctaggcgttattctgtggtggaggaaactgag
gggagctcgattgtaaccaatttagcaaaggacttggatctgagccagagtgaactctct
aggcggggggctagggtaatttccaaagggaacaaactgcatttgcagctcgatcaggag
accgggtatttgttgctaaatgagaaactggaccgagaggaactgtgcggtcacacagag
ccctgtgtgctgcgtttccaggtgttgctagagaatcccttacagttttttcaagctgag
ctacaagtaatagacataaatgaccatgctccggtgttcgtggaaagagatatgttgcta
aaaatatcagagagcagtcctcctgggactgcatttcctctgaggaacgctcaggatgtg
gatgtaggccgaaataatattgagagttatataatcagtcccaacccctattttcgggtc
cttacccgcaaacgcagcgatggcaggaaatacccggagctggttctagacaaagcgctg
gatcgcgaggaggaacctgagctcaggttaaccctcatcgctcaggatggcggctctcca
ccccggtctggaaccgctcaggtctacatcgaggtcatagatatcaacgataatgcccct
gaatttgagcagcctttgtatagtgttcagatccctgaggacagtcccataggcttcctg
attgtcagggtctctgcgacggatgtggacgtaggagtcaacggagagatttcctattca
cttttccaggcttcagaagagattagaaaaacctttgaaatcaaccccatgacaggagat
attcgactgaaaaaacatcttgatttcgaaacagttcagtcctatgaggtcaatattgag
gccagagatgctggaaatttgttcggaaagtgcaccgttctgactcgagttttggatgtg
aacgacaatgccccagaagtcaccatgtccgcgctaaccagacagatccctgagaactcg
cctgagactgtggttgcagtttacagtgtttcggatcttgattcggaagaaaatggaaaa
gtaagttgctccattcaggacgatctaccctttttcctgaaatcttccttggaaaacttt
tacaccctagtcacagagagaccgctggatagagagagcagagatgagtacaacatcacc
atcaccgtcactgacttggggacccccaggctgaaaacccagaaaaatataaccgtgata
gtctccgacgtcaacgacaacgccccggccttcacccaaacctcctacactctgttcgtc
cgcgagaacaacagccccgccctgcacataggcagcgtcagcgccacagacagagacgcg
ggcgccaacgcccaggtcacctactcgctgctgccgccacaggacccgcacctgcccctg
gcctccctggtgtccatcaacgccgacaacgggcagctgttcgccctgagggcgctggat
tacgaggccctgcaggccttggagttccgcgtgggcgccacggaccgcggctcccctgcg
ctgagcagccaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctctgcgccctgcaccgagctggtgcccagggcggcc
gagccgggctacctggtgagcaaggtggtggcggtggacggagactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcgcggctgctgagcgagcgcgacgcggccaagcacaggctg
gtggtgctggtcaaggacaacggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctcccggaagcggcggccgacccg
gcccaggccgacccgctcacggtctacctggtcatcgcgttggcgtcggtgtcgtcgctc
ttcctgttctcggtgctggcgttcgtcgcggcgcggctgtgcaggaggggcagggccgcc
tcgttgggtggctgctcggtgcccgagggccactttccgggccacctggtggatgtcagt
ggtactgggaccctttcccagagctaccagtatgaggtttgtctgaccggaggcttaggt
gccagcgagttcaaatttctgaagcctgttgtgcccaattctcagggccattaccctggg
ccagaaatagaagaaaatactaactttgggaatgattttggtttcagtattcagtga
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