Rhinolophus ferrumequinum (greater horseshoe bat): 117017859
Help
Entry
117017859 CDS
T07722
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03030
DNA replication
rfq03410
Base excision repair
rfq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117017859 (POLE)
03410 Base excision repair
117017859 (POLE)
03420 Nucleotide excision repair
117017859 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfq03032
]
117017859 (POLE)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117017859 (POLE)
Enzymes [BR:
rfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117017859 (POLE)
DNA replication proteins [BR:
rfq03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
117017859 (POLE)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
117017859 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
GARP
Motif
Other DBs
NCBI-GeneID:
117017859
NCBI-ProteinID:
XP_032954338
LinkDB
All DBs
Position
25:256440..298365
Genome browser
AA seq
2282 aa
AA seq
DB search
MVLRNSGRRLAEPRADGEASRDDGPPSSVSALKRLERSQWTDRMDVRFGFERLKEPGERT
GWLVNMHPTEVLDEEKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVRVRKEISPAVKKNREQ
SHTCDTYTAMLSSVLQGGSVILDEEEASKKTADQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRYRGNAFPVEVTRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVAEDIDDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAAHGLSMYEEIGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKMTSDGHVLDSETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVC
DQIKNKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIRHQLESEKFPPLTPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHVTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLC
AAVEAGDAAEVRRCRNMEVLYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
SIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTSCMKKPKVTISYPGAMLNIM
VKEGFTNEQYQELAEPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYDSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPSVRRHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
VQKIITIPAALQQVRNPVPRVKHPEWLHRKLLEKNDIYKQKKISELFILEGKRQVGPAQA
PQGTPSLGAPDMEDFGRVKLPHLAVPVATKRKRVLWESQEESQDLELTVPWQEVLGRPPA
LGTTQEEWLVWLRFHKKKWQLQARQRLARRKRRRLEGAEGAPQPGAIRDGPSAGLGGFLR
RTARSILDLPWQIVQISETTQAGVFRLWAVIGSDLHCIKLHVPRVFYVNQRVPKAEEGPS
SRKVNRVLPRSHTVYNLYEYSVPEDMYQGHINEISTELSAPDIEGVYETQVPLLFRALVQ
LGCVCVVSKQLRRHLSGWETDAFTLEHLEMRSLAQFSYLEPGSIRHIYLYHRTQGHKALF
GIFVPSQRRASVFVLDTVRSNQMPNLSALYTAEHGLLLDKVGPELLPPPKHTFEVRAETD
LKTLCRAIQRLLLVYKEERRGPTLIAVQSSWELRRLASEVPVLEEFPLVPIRVADHISYS
VLDWQRHGARHMLRHYLNLDTCLSQAFEMSRYFHVPVGNLPEDISTFGSDLFFARHLQCH
NHLLWLSPTPRPDLGGKEADDNRLVMEFDDQATVEINSPGCHSTVCVELDIQNLAVNTIL
QSHHVNDMEGADSMGISFDVTQQASLEDMITGNQAASTPASYDETALCSSTFRILKSMVV
GWVKEITQYGNVYADNQVVHFYRWLRSPSSLLHDPALHRTLHGWMKKLFLQLIAEFKRLG
SSVVYANFNRIVLCTRKRRVEDALAYVEYITSSIHSKEIFHSLTISFSRCWEFLLWMDPS
NYGGIKGKVPSGIHCGQRDSPKEGSTQGDEDDEDDEDEDEDGGQEPDVEDLLENNWNLVQ
FLPQAASCQTYFLMVVSAYIVAVHHSVQEELRRSAPGNTPVKRRGASQPSQEVQGAAAAL
PGVITFSQDYVANELTQNFFTITQKIQKKVTGSRNVAELSEMFPVLPGSHLLLNNPALEF
IKCVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSAEAQFRDPCRSYVLPEVICHSCHFC
RDLDLCKDPFVSQDGAMPPRWLCSNCQVAYDSSVIEMALVAALQKKLMAFTLQDLVCLKC
RGVKETHMPTYCSCAGGFSLTIHTKVFMEQIGIFRNIAQHYGMSYLMETLEWLLEKNPQL
GH
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaggaacagcgggcggcgcctagcggagccgcgcgcggacggcgaggccagc
agggacgatggccccccctcctctgtctcggcactcaagcgcctggagcgcagtcagtgg
acggataggatggatgtgcggttcgggtttgagcggctcaaggagccgggcgagaggaca
ggctggctcgtcaacatgcatcctactgaggttttagacgaagagaagcgcttagtcagt
gcagtggattactactttattcaagatgatggcagcagatttaaggtggccttgccctac
aagccgtacttctacattgcgaccagaaagggttgtgagcgagaagtttcatcttttctc
tctaagaagtttcagggtaaaatcgcgaaagtagagactgtccccaaagaggatctggac
ttgccaaatcatttggtgggtctgaagcggaattacattaagctgtcgttcaacaccgtg
gaggaccttgtcagagtgaggaaggagatctcccctgccgtgaagaagaaccgggagcag
agccacacctgcgacacctacacagccatgctctccagtgtcctgcaaggcggcagtgtg
atcctcgatgaagaggaagcctctaagaagactgccgaccagctggacaacatcgtggac
atgcgggagtacgacgtgccctaccacatccgtctctccatcgacctgaagatccacgtg
gctcactggtacaatgtcaggtaccgaggaaacgcctttccagtggaggtcacccgccgg
gatgacctggtcgaacgacccgaccctgtggtgttggcatttgacattgagacgaccaag
ctgcccctcaagtttcctgatgctgagactgaccaaattatgatgatttcctatatgatc
gatggtcagggctacctcatcaccaacagggagattgttgctgaggacattgatgatttt
gagttcacccccaagccggaatacgaagggcccttttgtgtcttcaatgaacctgatgag
gttcatctaatccaaaggtggtttgaacacgtccaggagaccaagcccaccatcatggtc
acctacaacggggacttttttgactggcccttcgtggaggccagagcagcagcccacgga
ctgagcatgtacgaggagatcgggttccagaaggacagccagggggagtacaaggcgccc
cagtgcatccacatggactgtctcaggtgggtgaagagggacagttaccttccggtgggc
agccacaacctcaaggcggctgccaaagccaagctgggctacgaccccgtggagctggac
cccgaggatatgtgccggatggccacggagcagccccagacgctggccacgtactcggtg
tcagacgcagtggccacatactatctgtacatgaagtatgtgcaccccttcatattcgcc
ctgtgcaccatcatccccatggagcccgacgaggtgctgcggaagggctccgggacgctg
tgcgaggccttgctgatggtgcaggctttccacgccaacatcatcttccccaacaagcag
gagcaggagttcaacaagatgaccagtgacggccacgtgctggactccgaaacctacgtg
ggcggccacgtggaagccctggagtccggcgtgttccgcagtgatatcccctgccggttc
aggatgaatcccgccgcctttgacttcctgctgcagcgcgtggagaagaccatgcgtcac
gctatcgaggaagaggagaaggtgcccatggagcaggtcaccaacttccaagaggtgtgt
gatcagattaagaacaagctcacctccctgaaagatgttcctaacagaatcgagtgtccc
cttatctaccacctggatgtgggggccatgtacccaaacatcatcctgacaaaccgcctg
cagccctctgccatggtggacgaagccacctgtgcggcctgtgacttcaacaagcccgga
gcaaactgccagcgcaagatggcctggcagtggaggggcgaattcatgccagccagccgc
agcgagtaccatcgcatccggcaccagctggagtcggagaagttccctcccttgacccca
gagggtccagcccgggcctttcatgagctgtcccgtgaggagcaggccaaatacgagaag
aggaggctggcagattactgccggaaggcctacaagaagatccacgtgaccaaggtggag
gagcgcctcaccaccatctgccagcgggagaactccttctacgtggacactgtgcgtgcc
ttccgcgaccggcgctacgagttcaaaggtctccacaaggtgtggaagaagaagctgtgt
gcggccgtggaggcaggtgacgcagcggaggtgaggcgctgcaggaacatggaggtgctg
tacgagtcactgcagctcgcacacaaatgcattctcaactccttctatggctacgtcatg
cgcaaaggggcccgctggtactccatggagatggccggcattgtctgcttcacgggggcc
agcattatcacgcaggcgcgggagctgatcgagcagattgggaggcccttagagctggac
acagatggaatatggtgcgtgctgcccaacagcttccctgaaaactttgtcatcaagaca
tcctgcatgaaaaagcccaaggtgaccatctcctaccctggggccatgttaaacatcatg
gtaaaggaaggcttcaccaatgagcagtaccaggagctggccgagcccgcctcactcacc
tatgtcacccgctcagagaatagcatcttcttcgaggtcgacgggccctacctagccatg
attctcccagcctccaaggaggagggcaagaaactgaagaagagatatgccgtgttcaac
gaggatggttccctggctgagctaaagggcttcgaggtgaagcgccgtggggagctgcag
ctgattaagatcttccagtcctccgtgttcgaggctttcctcaaaggcagtacgctggag
gaagtgtacgactccgtcgccaaggtggccgactactggctggacgtgctgtacagcaag
gcagctaacatgcctgactctgagctgttcgagttgatatctgagaaccgttccatgtct
cggaggctggaagattatggggagcagaagtcgacatccatcagcacagccaagcgcctg
gctgagttcctgggcgaccaaatggtgaaggatgcggggctgagctgccggtacatcatc
tcccggaagcccgaggggtctcccgtcacagagagggccatcccactcgccattttccag
gcagagccctcggtgaggaggcactttctccggaaatggctgaagagctcttcccttcaa
gacttcgatattcggacgattctggactgggactactacatcgagaggctgggcagcgcc
gtccagaagatcatcacgattcctgcggctctgcagcaggtgaggaacccagtgccacgc
gtcaaacaccccgagtggctgcacagaaagctgctggagaagaatgacatctacaagcag
aagaagatcagcgagctcttcatccttgagggcaagagacaggtgggcccggcccaggct
ccccaaggtaccccgagccttggagcgccagacatggaggacttcggccgagtgaagcta
ccccacttggcagttcccgtggcgactaagaggaaacgcgtcctctgggagagccaggag
gaatcgcaggacctggagctgacggtaccctggcaggaggtcctggggcggcctccggcc
ctcggaaccacccaggaagagtggctggtctggctgcggttccacaagaagaagtggcag
ctgcaggcccgacagcgcctcgctcgaaggaagaggcggcgtctagagggagcagagggt
gcaccgcagcctggggccatccgagatggaccctccgcagggctggggggcttcctgcga
agaaccgcccgcagcattctggaccttccatggcagattgtgcagatcagcgagactacc
caagccggcgtgttcaggctgtgggctgtcatcggcagcgacttacactgcatcaagctg
catgtcccccgtgtgttctacgtgaaccaacgggtgcccaaagcggaggaggggccttcg
tctcgcaaggtgaatcgagtccttcctcgctcccacacggtctataacctgtacgagtac
tcagtgccagaggacatgtaccagggacacatcaatgagatcagcacggagttgtcggcc
cccgacatcgagggcgtgtacgagacgcaggtcccgctgctgttccgggccctggtgcag
ctgggctgtgtgtgtgtggtcagcaagcagctgcgcaggcacctgtcaggctgggagaca
gacgccttcactctcgagcatctggagatgcgctcgctggcccagttcagctacctggag
ccagggagcatccgccacatctacctgtatcatcgcacacaaggccacaaggcgctgttc
ggcatcttcgtgccctcgcagcgcagggcgtccgtgtttgtgttggacaccgtgcgaagc
aaccagatgcccaacctgagcgccctgtacacagccgagcacggtctcctgctggacaaa
gtgggccccgagctcctgcctcccccaaaacacacctttgaggttcgggctgaaaccgac
ttgaagaccctctgcagggccatccagcgcctcctgctggtctacaaggaggagcgccga
gggcctaccctcatcgccgtgcagtccagctgggagctgaggaggctggccagcgaggtg
cctgtcctggaggagttcccgctagtgcccatccgcgtggccgaccacatcagctacagc
gtcctggactggcagcgccacggagcccgccacatgctccgtcactacctcaacctggac
acctgcctgtcgcaggccttcgagatgagccggtacttccacgtccccgttgggaacctg
cccgaggacatctccaccttcggctccgacctcttctttgcccgccacctgcagtgccac
aaccacctgctctggctgtcccctacgccccgcccagacctgggcgggaaggaggcagac
gacaaccggctcgtcatggagttcgatgaccaagccactgtggagatcaacagtccaggc
tgtcactcaacggtgtgcgtggagctggacattcagaacctggccgtcaacaccatcctg
cagtctcaccacgtcaacgacatggagggggccgacagcatgggcatcagctttgacgtg
acccagcaggcatccctggaggacatgatcactggcaatcaggcggccagcaccccggcc
agctacgacgagacggccctctgctccagcaccttcaggatcctgaagagcatggtggtg
ggctgggtgaaggagatcacgcagtacggcaacgtctacgccgacaaccaggtggtgcac
ttctaccgctggctgcgctcgccatcctcgctgctgcacgaccccgccctgcaccgcacg
ttgcacggctggatgaagaagctcttcctgcagctcatcgccgagtttaagcgcctgggg
tcgtcggtcgtctacgccaacttcaaccgcattgtcctgtgcacgaggaagcggcgggtg
gaggacgccttggcctacgtggagtacatcaccagcagtatccattctaaagagatcttc
cattccttgacgatttctttctcacgatgctgggagttccttctctggatggatccgtct
aactatggtggaatcaaagggaaagtgccatcgggcatccactgtggacagcgggactct
ccaaaggagggcagcacgcagggggacgaagacgacgaggacgacgaggacgaggacgag
gacggcggtcaggagccagacgtggaggacttgctggagaacaactggaacctcgtgcag
ttcctgccacaggcagcctcctgccagacctacttcctcatggttgtgtcagcatacatc
gtggccgtgcaccacagcgtgcaggaggagctgagacgcagcgccccggggaacaccccc
gtgaagagacggggggccagccagccatcacaggaggtccagggcgcagccgcagccctt
cctggggtgatcaccttctctcaggactatgtggcaaacgagctcactcagaacttcttc
accatcacacagaagattcagaagaaagtcacggggtccaggaacgtggctgagctctca
gagatgtttcctgtcctgcccggctctcacttgctgctcaataaccctgcactggagttc
atcaagtgcgtgtgcaaggtcctgtccctggacacaaacatcacaaaccaggtgaacaag
ctgaaccgggacctgctccgcctggtggacgtcggcgagttctcggcagaggcccagttc
cgagacccctgccgctcctacgtgctccccgaggtcatctgccacagctgtcacttctgc
cgggacctggacctgtgcaaagacccctttgtctcccaggacggagccatgccgccccgg
tggctgtgctccaactgtcaggtcgcctacgactcgtccgtcatcgagatggcgctggtg
gcggccctgcagaagaagctgatggccttcacgctgcaggacctggtctgcctgaagtgc
cggggtgtgaaggagacccacatgcccacgtactgcagctgtgccgggggcttcagcctc
accatccacaccaaggtcttcatggagcagatcggaatcttccggaacattgcccagcac
tatggcatgtcgtacctcatggagaccctggagtggctgctggagaagaacccccagctg
ggccattag
DBGET
integrated database retrieval system
