Rhinolophus ferrumequinum (greater horseshoe bat): 117018261
Help
Entry
117018261 CDS
T07722
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03018
RNA degradation
rfq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117018261 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
117018261 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117018261 (LSM8)
03041 Spliceosome [BR:
rfq03041
]
117018261 (LSM8)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117018261 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
117018261 (LSM8)
Spliceosome [BR:
rfq03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117018261 (LSM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
117018261
NCBI-ProteinID:
XP_032955074
Ensembl:
ENSRFEG00010017515
UniProt:
A0A671FL18
LinkDB
All DBs
Position
26:complement(24976441..24983422)
Genome browser
AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggctctggagaattacatcaaccgaactgttgctgttattacttctgacggg
agaatgattgtgggaacactgaaaggttttgaccagaccattaatttgattttggatgaa
agccatgaacgcgtgttcagctcttcacagggagtagaacaagtggtactagggttatac
atcgtaagaggtgacaatgttgcagtcattggggaaattgatgaagaaacagattctgca
cttgatttggggaacattcgagcagaacctctaaactcagtagcacactga
DBGET
integrated database retrieval system
