Rhinolophus ferrumequinum (greater horseshoe bat): 117018332
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Entry
117018332 CDS
T07722
Symbol
SMO
Name
(RefSeq) smoothened homolog isoform X1
KO
K06226
smoothened
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04340
Hedgehog signaling pathway
rfq04360
Axon guidance
rfq05200
Pathways in cancer
rfq05205
Proteoglycans in cancer
rfq05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117018332 (SMO)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
117018332 (SMO)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117018332 (SMO)
05205 Proteoglycans in cancer
117018332 (SMO)
09162 Cancer: specific types
05217 Basal cell carcinoma
117018332 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rfq04030
]
117018332 (SMO)
G protein-coupled receptors [BR:
rfq04030
]
Frizzled / Smoothened family
117018332 (SMO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
DUF7470
Motif
Other DBs
NCBI-GeneID:
117018332
NCBI-ProteinID:
XP_032955176
Ensembl:
ENSRFEG00010016219
UniProt:
A0A671FKT9
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Position
26:complement(17029458..17048671)
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AA seq
788 aa
AA seq
DB search
MAAACLVRGPELLLLGLLLLLLGGPGRGAALSGNATGPGPRSAGGSARKSAAVTGPPPLL
SHCGRAAPCEPLRYNVCLGSALPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWAV
IQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPEGCPNE
VQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHRYIAVFGAIT
GLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTM
RLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYFH
LLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIR
GVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWE
RSFRDYVLCQANVTIGMPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKAT
LLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPVA
GLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEKANLWLVEAEI
SPELEKRLGRKKKRRKRKKEVCPLVPPPELHHPAPTPASSAVPRLPQLPRQKCLVATGAW
GAGESCRQRAWTLVSNPFCPEPSPLQDPFLPSAPAPTAWAQGRRQVLGPIHSRTNLMEAE
LMDADSDF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcctgcctcgtacgggggccggagctcctgctcctggggctgctgctgctg
cttctggggggccccggccggggggccgccttgagcgggaacgcgaccgggcctgggccg
cggagcgcgggcgggagcgccagaaagagcgcggcggtgaccggcccgccgccgctgctg
agccattgcggccgggccgccccctgcgagccgctgcgctacaacgtgtgcctgggctcg
gcgctgccctacggggccacctccacgctgctggccggggactcggactcacaggaggaa
gcgcacggcaagctggtgctctggtctggcctccggaatgccccccgctgctgggcagtg
atccagcccctgctgtgtgctgtgtacatgcccaagtgtgagaacgaccgggtagagctg
cccagccgcaccctctgccaggctactcgtggcccctgcgccatcgtggagagggaacgg
ggctggcctgacttcctgcgctgtacccctgaccacttccccgagggctgcccgaatgag
gtgcagaacatcaagttcaacagttcaggccagtgtgaggctcccttggttcggaccgac
aaccccaagagctggtacgaggacgtggagggctgtgggatccagtgccagaacccactc
ttcacggaggccgaacaccaggacatgcaccgctacatcgccgtcttcggtgccatcacg
ggcctctgcacgctcttcacgctggccacttttgtggctgactggcggaattcgaatcgc
taccctgcagttattctcttctatgtcaatgcgtgtttctttgtgggcagcattggctgg
ctggcccagttcatggatggtgcccgccgggagatcgtctgccgtgcagatggcaccatg
aggcttggggagcccacctccaacgagaccctgtcctgcgtcatcatctttgtcattgtg
tattacgccctgatggctggtgtcgtctggtttgtggtcctcacctatgcctggcacacc
tccttcaaagccctgggcaccacttaccagcctctctcaggcaagacctcctatttccac
ctgctcacgtggtcactcccctttgtcctcactgtggcaatcctcgctgtggcccaggtg
gatggggactccgtgagtggcatctgtttcgtgggctacaagaactaccgataccgtgct
ggcttcgtgctggcaccaattggcctggtgctgattgtgggaggttacttcctcatccga
ggagtcatgactctgttctccatcaagagtaaccacccggggctgctgagtgaaaaggct
gccagcaagatcaacgagactatgctgcgcctgggaatttttggcttcctggcctttggc
tttgtgctcatcaccttcagctgccacttctacgacttcttcaaccaggctgagtgggag
cgtagcttccgggactacgtgctgtgccaggccaatgtgaccatcgggatgcccaccaag
aaacccatccccgactgtgagatcaagaatcgccctagcctcctggtggagaagatcaac
ctatttgccatgtttggaaccggtattgccatgagcacctgggtctggaccaaggccacg
ctgctcatctggaggcgcacctggtgcaggttgactgggcagagtgatgatgagcccaaa
cgcatcaagaagagcaagatgattgccaaggccttctccaagcggcgcgagctgctgcag
aacccaggccaggagctctccttcagtatgcacaccgtctcccatgatggccctgtggca
gggctggcctttgacctcaatgagccctcagctgatgtgtcctcggcctgggcccagcat
gtcaccaagatggtggctcggagaggagccatactaccccaggatgtgtctgtcactcct
gtggcaactccagtgcccccagaggaaaaagccaacctctggctggttgaggcagagatc
tccccagagctggagaagcgcctgggccggaagaagaagcggaggaagaggaaaaaggag
gtgtgcccactggtgccgcccccagagcttcaccaccccgcccccacccctgcctccagt
gctgttcctcgactgccacagctgccccggcagaagtgcctggtggccacaggtgcctgg
ggagctggggagtcctgccgacagagagcctggaccctggtctccaaccccttctgccca
gagccgagtcccctgcaggatccgtttctgcccagtgcccccgcccccaccgcctgggct
cagggccgccggcaggtgctggggcccattcactcccgaaccaacctgatggaggcagag
ctcatggatgcagactcggacttctga
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