Rhinolophus ferrumequinum (greater horseshoe bat): 117018499
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Entry
117018499 CDS
T07722
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03320
PPAR signaling pathway
rfq04659
Th17 cell differentiation
rfq04919
Thyroid hormone signaling pathway
rfq04920
Adipocytokine signaling pathway
rfq04928
Parathyroid hormone synthesis, secretion and action
rfq05200
Pathways in cancer
rfq05202
Transcriptional misregulation in cancer
rfq05207
Chemical carcinogenesis - receptor activation
rfq05216
Thyroid cancer
rfq05222
Small cell lung cancer
rfq05223
Non-small cell lung cancer
rfq05226
Gastric cancer
rfq05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
117018499 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117018499 (RXRB)
03320 PPAR signaling pathway
117018499 (RXRB)
04919 Thyroid hormone signaling pathway
117018499 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
117018499 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117018499 (RXRB)
05202 Transcriptional misregulation in cancer
117018499 (RXRB)
05207 Chemical carcinogenesis - receptor activation
117018499 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
117018499 (RXRB)
05216 Thyroid cancer
117018499 (RXRB)
05222 Small cell lung cancer
117018499 (RXRB)
05223 Non-small cell lung cancer
117018499 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
117018499 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfq03000
]
117018499 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rfq03310
]
117018499 (RXRB)
Transcription factors [BR:
rfq03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
117018499 (RXRB)
Nuclear receptors [BR:
rfq03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
117018499 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
DUF3306
Motif
Other DBs
NCBI-GeneID:
117018499
NCBI-ProteinID:
XP_032955400
Ensembl:
ENSRFEG00010014125
UniProt:
A0A671FF56
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Position
3:complement(3562658..3569285)
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AA seq
536 aa
AA seq
DB search
MSWTARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAATAAAAAAGEQQTT
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGPPPHSPPGPPLPSSAAPSLGGSGAPPP
PPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSL
SRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQ
KYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggactgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcgacggcggcggcggcggcagccggagaacaacaaaccacg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggattcccga
agcccagacagttcctctccaaatccccttccccaggggccccctccccattctcctcct
ggaccacccctaccctcttcagcagccccatcccttggaggctctggggcaccaccccca
ccccccatgccaccacccccactgggctcccccttcccagtcatcagctcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactatggggtttacagt
tgtgagggctgcaaaggcttcttcaaacgcaccattcgcaaggacctgacctactcgtgc
cgggacaacaaggactgcacggtggacaagcgccagcggaaccgctgtcagtactgccgc
tatcagaagtgcctggccacgggcatgaagcgggaagcggtacaggaggagcgtcagcgg
gggaaggacaaggacggggatggggagggggctgggggagcccccgaggagatgcctgtg
gacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgagggt
cctgggggaaccgggggtagcggcagcagcccaaatgaccctgtgactaacatctgtcag
gcagctgacaaacagcttttcacgcttgttgagtgggcgaagaggatcccacacttttcc
tccttgcctctggatgaccaggtcatattgctacgggcaggctggaacgagcttctcatt
gcctctttctcccaccgatccattgatgtgcgagatggcatcctcctcgccacaggtctt
catgtgcaccgcaactcagcccattctgcaggcgtgggagccatctttgataggtccctc
tccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagag
cttggctgcctgagggcaatcattctgttcaatccagatgccaagggcctctccaacccc
agcgaggtggaggtcctgcgggagaaagtgtatgcgtcactggagacctattgcaaacag
aaataccctgagcagcagggacggtttgccaagctgctgctgcgtcttcctgccctcagg
tccatcggccttaagtgtctagagcatctgtttttcttcaagctcattggtgacaccccc
atcgacaccttcctcatggagatgctggaggcgccccaccagctggcctga
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