KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117018551
Entry
117018551         CDS       T07722                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117018551 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rfq03021]
    117018551 (TAF5L)
   03036 Chromosome and associated proteins [BR:rfq03036]
    117018551 (TAF5L)
Transcription machinery [BR:rfq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117018551 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     117018551 (TAF5L)
Chromosome and associated proteins [BR:rfq03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     117018551 (TAF5L)
    STAGA complex
     117018551 (TAF5L)
    TFTC complex
     117018551 (TAF5L)
    SAGA complex
     117018551 (TAF5L)
    SLIK complex
     117018551 (TAF5L)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Aladin DSE1_N CFAP251_N PAC11 Beta-prop_RIG_2nd Beta-prop_WDR41 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_VPS8 Tricorn_2nd Beta-prop_NOL10_N Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 ASA1 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st eIF2A PEP5_VPS11_N Ge1_WD40 Nbas_N PD40 Tricorn_N YfmQ
Other DBs
NCBI-GeneID: 117018551
NCBI-ProteinID: XP_032955502
Ensembl: ENSRFEG00010022146
UniProt: A0A671G6V5
LinkDB
Position
27:26825792..26855670
AA seq 589 aa
MKRVRAEHIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMATNLTVQSESGCANVVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLTLVQNSPKSTVESFY
SRFHGMFLHNASQKDVIEQLQTTQSIQDVLSNFKLRAFLDNKYVVRLQEDSYNYLVRYLQ
SDNNAALCKVLTLHIHLDVQPAKRTDYQLYASGSAARGEGSSLEPADMPAPVLHDEAALA
VLQDSIRRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKPGPHRVDVSRVHLACDVLEEEDDEDETVGTEMKTLRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSADKTVRLWSAQQGGSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHSDNITSLTFSPDSSLIASASMDNSVRVWDVR
GAHGGAPADGSSGELVGVYSGPVSSVLSVRFMACNLLLVTGISQESPDH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgagtacgcgccgagcacattcagatggcagtgtcctgctacctcaaacgtcgg
cagtacgtagactcagatgggcccctgaagcaaggactgcggctgtcacagactgctgag
gagatggccaccaacctcacagtccaatcagagtctggttgtgccaacgtggtgtccgca
gctccttgccaggcagagccccagcaatacgaagtgcagtttggacgactgcggaatttt
ctcaccgattctgactcccagcatagccacgaagtgatgcccctcctgtaccctctcttc
gtctacctccatctcaccctggtccagaacagtccgaagagcacggtggagagtttctac
agccgcttccacgggatgtttctgcacaacgccagccagaaggacgtcatcgagcagctg
caaaccacacagagcatccaggacgtactgtccaacttcaagctccgcgccttcctagat
aacaagtacgtggtccgcctccaagaagacagctacaactaccttgtccgctacctccag
agtgacaacaacgccgcgctctgcaaagtgctcaccttgcatatccacctggatgtgcag
cctgccaagaggacagattaccagctctatgccagcggcagcgccgcgcgaggcgagggc
agcagcctggagccggccgacatgcccgcgcctgtcctgcatgacgaggccgccctggct
gtcctgcaggacagcataaggcgcgtcaaggacggccctccgtccctcaccaccatctgt
ttctacgccttctacaacaccgagcagctgctgaacacagccgagatctccccggacagc
aagctgctcgccgcgggcttcgacaactcctgtatcaagctgtggagcctgcgatccaag
aagttaaagccggggcctcatcgagtcgacgtgtcccgcgtccacttggcttgtgatgtc
ctggaagaggaggacgatgaggatgaaactgtgggcacagagatgaagaccctgcgagga
cactgtgggccagtgtacagcacgcggttcctcgccgacagctcagggttgctgtcttgt
tctgaagacatgtccatcaggtactgggacctggggagcttcaccaacactgtgttgtac
cagggacatgcctaccctgtgtgggacctggacattagcccgtacagcctgtactttgcc
agcgggtcccatgaccgcacagcgaggctgtggtcatttgatcggacgtacccgctgaga
atatatgcaggacacctggcggacgtggactgcgtcaagttccaccccaactcgaactac
ttggccacgggctccgccgacaagacggtccggctgtggagcgcccagcagggcggctcg
gtgaggctcttcacgggccaccgcggccccgtgctgtccctcgccttttctcccaacggc
aagtacttggcgtcggccggcgaggaccagcgcctgaagctgtgggacctggcgtccggg
accctttacaaggagctcagaggccactcggacaacatcaccagcctgacgttcagcccg
gacagcagcctcatcgcctcggcctccatggacaactcggtgcgcgtgtgggacgtccgg
ggcgcgcacgggggcgccccggccgacggctcctcgggcgagctggtgggcgtgtacagc
ggcccggtgagcagcgtcctgagcgtgcgcttcatggcctgcaacctcctgctggtgacc
gggatctcgcaggagagcccggaccattga

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