KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117018656
Entry
117018656         CDS       T07722                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rfq01009]
    117018656 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rfq03036]
    117018656 (KDM5B)
Enzymes [BR:rfq01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117018656 (KDM5B)
Protein phosphatases and associated proteins [BR:rfq01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117018656 (KDM5B)
Chromosome and associated proteins [BR:rfq03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117018656 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like
Other DBs
NCBI-GeneID: 117018656
NCBI-ProteinID: XP_032955696
Ensembl: ENSRFEG00010020669
UniProt: A0A671G2U3
LinkDB
Position
27:216646..266116
AA seq 1544 aa
MEPAAAPPPGPRPAPPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPNLATDTKDKEYKPHDIPQRQSVQPLETCPPARRAKRMRAEAMN
IKIEPEETTEARTHNLRRRMGCPTPKCENEKEVKSSFKQEPLEKKEHVVESEREKPKSRP
KKTTSAVDLYVCLLCGRGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKVRLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKRLAPE
LFVSQPDLLHQLVTIMNPNTLMTHHVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKAAVLDVVVASTVQKDMAVMVE
DERALRDAVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVK
ELCSCPPYKYKLRYRYTLDDLHPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSLK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCATVAQQLLNGKRQTRYRSGGGKSQNQLTVN
ELRQFVTQLYALPCVLSQTPLLKGLLSRVEDFQQHSQKLLSEEMPSAAELQSLLDVSLEF
DVELPQLAEMRIRVEQARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMAR
LQELLTVSEHWDDKARSLLRARPRHSLSSLATAVKEIEEIPAYLPSGAALRDSVQRARDW
LQDVEALQVGGRVPVLDALVELVTRGRCIPVHLNSLPRLESLVAEVQAWKECAANTFLIE
NSPCSLLEVLCPRCDIGLWGSKRKQRKLKEPLPSGKKRSSRLESLSDLERALAESKETAA
AMAALGEARLREMEAMQSLRLANEGKWLSPVPDVETKVCMCQKAPAAPMIQCELCRDAFH
TSCVAVPSAVQGPGVWLCPHCRRSEKPPLEKVLPLLASLQRIRVRLPEGDALRYMIERTV
SWQHRAQHLLSSGSLRAAHSRTGPGLSQSRRQAPAGQAAETSEVSPPPGTTSSSSPDDRD
NRTSYSASPFFTGRSRIPLHGISTEVSELLMEAQLLQVSLPEIQELYRTLLAKPSSVQPA
GRSSPVRPSGEKSDGCRGKRDGVNGLERKLKRRLEREGLASERRDRVRKMRMPRKKKIKL
SHPKDTDNPQLERERSSEAAPSAETHSPPSDTSYSEQDDSEDDDAICPAVSCLQPEGDEV
DWVQCDGSCNQWFHQVCVGVSPEMAEKEDYVCVVCTVKDALSRK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggagccggccgccgcgccgccccctggcccgcgccccgcgccgcccctcgggggcccc
ggcccgctgggcgagttcctgccgccgcccgagtgcccggtgttcgagcccagctgggag
gagttcgccgacccgttcgccttcatccacaagatccggcccatcgccgaacagacgggc
atctgtaaggtgcggccgccgccggattggcagccaccatttgcatgtgacgttgacaaa
cttcattttaccccacgtatccagaggctgaatgaattggaggctcaaactcgtgtaaaa
ttgaatttcctggaccagattgcaaagtactgggagttacagggaagtactctgaaaatc
ccacatgtggagagaaagatcttggacttgtttcagcttaataagttagttgcagaagaa
ggtggatttgcagttgtttgcaaggatagaaaatggaccaaaattgccaccaagatgggg
tttgctcctggcaaagctgtgggctcccacatcagagggcattacgagcgtatcctcaac
ccctacaacctgttcctgtctggagatagtttgaggtgtctgcagaagccaaacctggcc
acagacacaaaggacaaggaatacaagccccatgatattccccagaggcagtctgtgcag
cctttggagacatgccccccagctcgacgagcaaaacgcatgagagcagaggccatgaat
attaaaatagaaccagaagagacaacagaagccaggactcataacctgagacgtcgaatg
ggttgcccaactccaaaatgtgaaaatgagaaagaagtgaaaagcagcttcaagcaagaa
cctctggagaagaaggagcacgtggtagaaagtgagagggagaagcccaagagtcggcct
aagaaaaccaccagcgcagtggacctgtacgtctgcctcttgtgtggccgtggcaacgat
gaggaccggctgctcctgtgtgacggctgtgatgacagttaccataccttctgcttgatc
ccgccgcttcacgacgttcccaagggggactggaggtgtcctaagtgtttggctcaggag
tgcagtaagccacaagaagcgtttggctttgagcaagcggcccgggactataccctccgt
actttcggggaaatggcagacgcgttcaaatccgattacttcaacatgccggtccatatg
gttcccacagaactagttgagaaagaattttggcgactggtaagcactattgaagaggat
gtcacagtagaatatggagccgatatcgcctcgaaagaatttggcagcggctttcctgtg
cgggacgggaaggtcagactgtcccctgaggaagaggagtatcttgacagcggctggaat
ttgaacaacatgccggtgatggagcagtctgtgctggcccatatcaccgccgacatctgt
ggcatgaagctcccctggctgtatgtgggaatgtgcttctcttcattctgctggcacatt
gaagaccactggagctactcgattaactatctgcactggggtgagccgaaaacctggtat
ggcgtcccagggtatgctgccgagcagcttgagaacgtcatgaagaggctcgcccccgag
ctcttcgtgtcccagcccgacctgctccaccagctggtgaccatcatgaaccccaacacc
ctgatgacgcaccacgtgcctgtttaccggactaaccagtgtgcgggggagtttgtgatc
acgttcccgcgagcctaccacagtggcttcaatcaaggctttaattttgctgaggctgtg
aacttctgcactgtggactggctgcccttaggccgtcagtgtgtggagcattaccgcctg
cttcaccgctactgtgtgttttcccacgatgagatgatttgcaagatggcttccaaggcc
gccgtgctagatgttgtggtggcatcaaccgttcagaaggacatggccgtcatggtcgag
gatgagagagctttaagagatgctgtgcgtaagttgggagtcattgattcggaaaggatg
gattttgagctgttgccagatgatgagcgtcagtgtataaaatgcaaaaccacgtgcttc
atgtctgccatctcctgctcttgtaaacctggcctgcttgtttgcctgcatcatgtgaag
gagctgtgttcctgtcctccttacaagtacaaactgcggtacagatacactctggacgac
ctccaccccatgatgaatgcgttgaagcttcgagcagaatcctacaacgaatgggccttg
aatgtgaatgaggctttggaggcaaagatcaacaagaagaaaagccttgtcagcttgaag
gctttaattgaagaatctgaaatgaagaaattcccagacaatgatctgttacgtcacctt
cgcttagtcacacaggacgcggagaagtgtgccactgttgcacagcagttgctcaacggc
aaaaggcagaccagataccgatctggtggaggaaaatcccagaatcagctgacggtgaat
gagctgcgacagtttgtgacgcagctgtacgctcttccctgtgtcctcagtcagacaccg
ttgctgaaggggctcttgagtcgtgtagaagatttccaacagcacagccagaaactgctc
tcagaggaaatgcccagcgctgccgagctgcagagcttgctggatgtcagccttgaattt
gacgttgagcttccccagcttgctgagatgcgcatccgtgtggagcaggcccgctggcta
gaagaggtgcagcaagcttgcctcgaccccagctccctgacgttggatgatatgagacgt
ctcatagacctcggagtgggcctggccccatactcagccgtggagaaagctatggctcgg
cttcaggagctgctcacagtgtcagagcactgggatgacaaagccaggagtctgctccgc
gccagaccacggcactcactcagcagccttgctacggccgtgaaggagattgaggagatc
cctgcgtacctgcccagcggggcagctctgcgagactccgtgcagagggcccgggactgg
cttcaggacgtggaggccctgcaggttggaggacgtgtgccagtgttagacgcactcgtg
gaacttgttacgcgaggccgctgtatcccggtgcatctgaattctttaccaagactggaa
tcgctggtcgctgaggttcaggcttggaaagaatgtgctgccaatacattcttgattgag
aattctccatgctctctcttggaggtgctgtgtcctcggtgtgatatcggcctttgggga
tcgaagaggaagcagagaaagttaaaggagcccttgccaagtggaaagaagagaagcagc
agactggagagtctgagtgacctggagagggctttagccgagagcaaggagacggccgcc
gctatggcagcgctgggggaagctcgcctgagggaaatggaagccatgcagtctctcaga
ctagccaacgaggggaagtggctgtcgcctgtcccggacgtggagacgaaggtctgcatg
tgtcagaaggcgccggccgccccaatgatccagtgtgaactctgcagggatgctttccac
accagctgcgtggcggtccccagtgctgtgcagggccccggcgtctggctctgtccccac
tgccggcggtccgagaagcccccattagagaaggtcttgcccctgctggcttcactgcag
cgtatccgggtccggctccccgagggggacgctctgcggtacatgatcgaacggaccgtg
agttggcagcacagagcccagcacctgctgtcctcagggagcctcagggctgcgcacagc
cgcacgggtccgggactgtcacagagcaggcggcaggccccggcggggcaggcggcagag
accagcgaggtgtctccgcctcctgggacgacttcctcttcctcgcctgacgacagagac
aacagaacctcgtattcagcctctcccttctttactgggcggagtcgcatccccctgcac
ggcatcagcaccgaagtgagtgaactgctgatggaggcgcagctgctccaggtgtcgctt
cccgaaatccaggaactttaccggactttgctggcgaagcccagctctgtgcagccagct
ggccggagctcaccagtcagacccagcggtgagaagagcgacggctgccgcgggaagaga
gatggggtgaacggcctggagaggaaactgaagagacgcctggaaagagaaggcctcgcc
agcgagcggagggatcgagtgaggaaaatgcggatgcccagaaagaagaaaatcaaactg
agccaccccaaggacacggacaatccccagttagagagagagcgtagctctgaggcagcc
ccatctgccgaaacccattccccgccctcagacacgtcctactccgagcaggacgactct
gaggatgatgacgccatctgcccggctgtgagctgtctgcagccggaaggagacgaggtg
gactgggtccagtgtgatggcagctgcaaccagtggtttcaccaggtctgtgttggtgtt
tctccagagatggcagagaaggaggactacgtctgtgtggtctgcactgtgaaggatgcg
ctgagccggaagtaa

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