Rhinolophus ferrumequinum (greater horseshoe bat): 117018849
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Entry
117018849 CDS
T07722
Symbol
ACAN
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rfq00535
]
117018849 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
rfq00536
]
117018849 (ACAN)
04091 Lectins [BR:
rfq04091
]
117018849 (ACAN)
Proteoglycans [BR:
rfq00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
117018849 (ACAN)
Glycosaminoglycan binding proteins [BR:
rfq00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
117018849 (ACAN)
Lectins [BR:
rfq04091
]
C-Type lectins
Lecticans
117018849 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
EGF
V-set
Lectin_C
hEGF
EGF_TEN
EGF_3
EGF_CA
I-set
Ig_3
ig
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117018849
NCBI-ProteinID:
XP_032955991
LinkDB
All DBs
Position
28:complement(4808450..4855566)
Genome browser
AA seq
1935 aa
AA seq
DB search
MTTLLLVFVTLRVITAAVPVEASDPDNSLSVSIPEPSPLRVLLGTSLTIPCYFIDPMHPV
TTAPSTAPLTPRIKWSRISKEKEVVLLVATEGQVRVNRAYQDKVSLPNYPAIPSDATLEI
QNLRSNDSGIYRCEVMHGIEDSEAALEVVVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDMDEFPGVRTYGIRDTNE
TYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAWQGGMDMCSAG
WLADRSVRYPISKARPNCGGNLLGVRTVYLHANQTGYPDPSSRYDAICYTGEDFVDIPEN
FFGGGTEDITIQTVTWPDVELPLPRNITEGEARGTVILTVKPIFHGSPTALEPEEPFTLA
PDVEATTIPEAENGTEEATRPWAFPEESTPGLGPATAFTSEDLVVQVTIAPGAAEIPGQP
RLPGGVVFHYRPGSARYALTYEEAQQACLRTGAAIATPEQLQAAYEAGYEQCDAGWLQDQ
TVRYPIVSPRTPCVGDKDSSPGVRTYGVRPPSETYDVYCYVDKLEGEVFFTTRPEQFTFQ
EALEFCESHNATLATTGQLYAAWSRGLDKCYAGWLADGSLRYPIVTARPACGGDKPGVRT
VYLYPNQTGLPDPLSRHHAFCFRGVLAVPSPGEEESSTPTLPSIVEDRITTQAAPGVAAV
PLGEQTTAIPAFTIEPENRTEWEAASTPAGTYPMPGIPPTWSPTSTATEESTEGPAATEV
PLASEEPSPSKEPSPSEEPFPSEKPFPSEEPATLSPPVPSGTELPGSGETSRAPEVSGDF
TGSGEASGGLDTSGQPSGGTASGLPSEDLDSSGLTSTVGSGLPVGSGLASGGKDGITWSS
TSEVGGLPSGGEGLETSATGVEDLSGLPSGEGPETSTSGVGDLSGLPSGREGLETSATGV
EDLSGLPSGEGPEVSASGVGDLSGHPSGREGLETSASGVEDLTGLPSGGEGHLEISASGV
GDLSGLPSGGEGHLETSASGVGDLSGLPSGRESLETSTSGVGDDLSGLYSGREGLETSTS
GAEDLSGLHSGREDLIGSASGALDFGRTPSGTLGSGQAPEASGLPSGFTGEYSGIDFGSG
PSSGLPDFSGLPSGFPTVSLVDTTLVEVVTATTAGELEGRGTIGISGAGEISGVPFSELD
ISGGASGLPSGAELSGQASASPEISGTTSGLFGVSGQPSGFPDISGGTSGLFEISGQPTG
FPGEISGVPELSGLSSGQPDISGEASGVLFGSGQPFGITDLSGEMSGVPDLSGQASGLPE
LSGTTSGIPDLVSSTMSGSGEPSGITFVDISLVEVTPTTFTEEGLGSVELSGLPSGETDL
SGTSGIADVSGQSSGAVDSSGFTSQPPEFSGLPSGVAEVSGEASGVEIGSSLPSGAYDGS
GLPSGFPTVSLVDRTLVESVTHAPTAQEAGEGPSGILELSGAHSGAPDMSGDHSGVLDLS
GLQPRLVEPSGEPSSTPYFSGDFSGTIDVSGESSAATSASGEASGLPEVTLITSEFVEGV
TEPTVSQELGQRPPLTHTPQLFESSGEASASGDISGATAGCSGSGVEASSVPEASSETSA
YPEPGVGASAAPEASGGASGFPDLSETTSAFHEADVEGASGLGVSGSTSAYQEGLTEGST
TLEVSGESTSTYDVGVETSGWPSATPVASGDRTEIGGDLSGHTSGLDVIIGTSSPEYEWT
QQTQRPAEAHLEIESSSPLHSGEETQTAETATSPTDASIPTSPGGTEESEATTAGVAAPA
RSCAEEPCGAGTCQETEGHVICLCPPGYTGEQCDIDIDECLSSPCQNGATCVDAIESFTC
LCLPSYRGDLCEIDQELCEEGWTKFQGHCYRHFPDRENWVDAESRCREQQSHLSSIVTPE
EQEFVNSECSGVSRT
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactcctggtgtttgtgactctgagggtcatcaccgcagccgtcccagta
gaagcttcagaccctgacaactcgctgagtgtcagcatccccgaaccgtccccactgcgg
gtcctcctggggacctccctcaccatcccctgctatttcatcgaccccatgcaccctgtg
accaccgccccttccaccgcccccctcaccccgagaatcaagtggagccgcatttccaag
gagaaggaagtggtactgctggtggccacggaaggacaagtgagggtcaaccgtgcctac
caggacaaagtgtcactgcccaactacccagccatccccagcgatgccaccctggagatc
cagaacctgcgctccaatgactctgggatctaccgctgtgaggtgatgcacggcatcgag
gacagtgaggccgccctggaggtcgtggtgaaaggcattgtgttccattacagagccatc
tccacacgctacaccctggacttcgacagggcgcagcgagcctgcctgcaaaacagcgcc
atcatcgccactccggagcagctgcaggccgcctacgaggatggcttccaccagtgtgat
gccggctggctggccgaccagactgtcaggtaccccatccacactccccgagaaggctgc
tatggggacatggatgagtttcctggtgtgagaacctatggcatccgtgacaccaatgag
acttacgacgtgtactgcttcgcggaggagatggagggcgaggtcttttatgcaacatct
ccagagaagttcaccttccaggaggccgccaacgagtgccggcggctgggtgcccggctg
gccaccacgggccagctgtacctggcctggcagggcggcatggacatgtgcagtgccggc
tggctggccgaccgcagcgtacgttaccccatctccaaggccaggcccaactgtgggggc
aacctcctcggtgtgaggaccgtttacctgcacgccaaccagaccggctaccccgacccc
tcatctcgctacgacgctatctgctacacaggtgaagactttgtggacatcccagaaaac
ttctttggggggggcacggaggacatcaccatccagacagtcacctggcctgacgtggag
ctgcccttgccccgaaacatcacggagggggaagcccgaggcaccgtgattctcactgtg
aaacccatcttccatggctcccccactgccctggagcccgaggagcccttcacactggcc
cctgacgtggaggccaccaccatccctgaggctgagaacgggactgaagaggccacgagg
ccctgggcctttcccgaggagtccacacctggcctgggccccgccactgccttcaccagt
gaggacctcgtcgtgcaggtgaccatagccccaggtgctgccgagatccctgggcagcca
cgattgccggggggggttgtgttccactaccggccgggctctgcccgctatgcgcttacc
tacgaggaggcacagcaggcctgcctgcgcacgggggcggccatcgccacgcctgagcag
ctccaggccgcctatgaagccggctacgagcagtgtgatgccggctggttgcaggatcag
accgtcagataccccattgtgagcccacggaccccctgtgtgggcgataaggacagcagc
cctggggtcaggacctatggcgtgcgcccaccgtcagaaacctatgacgtctactgctac
gtggacaagctcgagggggaggtgttcttcaccacacgcccggagcagttcaccttccag
gaagccctggagttctgtgaatcccacaatgccacgctggccaccacgggccagctctac
gccgcctggagccgtggcctggacaagtgctatgctggctggctggctgacggcagcctc
cgctaccccatagtcaccgctcggcctgcctgtggcggggacaagccaggcgtgagaacc
gtctacctctaccccaaccagacaggcctcccggacccgctgtcgcggcaccacgctttc
tgcttccgaggtgtcttggcggtgccgtctccaggagaagaggagagtagcacacccacg
ctaccctccatcgtggaggacaggatcactactcaagcggcacctggcgtggctgctgtc
cccttgggggagcagacgactgcaatcccagctttcaccattgagccagaaaaccggacg
gaatgggaagcagcctccaccccagcgggcacttacccaatgccagggatccctcctacg
tggtctcccactagcacagcaacagaggagagcacagaaggccctgctgcaacagaagtg
cccttggcctcagaggagccttctccctcaaaagagccatccccctcggaggagccattc
ccctcggagaagccatttccctcggaggagcctgccacactttcacccccagtgcccagt
gggacagagctgccaggctctggggagacatccagggcacctgaagtcagcggtgacttc
acaggcagtggagaagcttcgggaggcctggacaccagcgggcagccctcagggggaact
gcaagtggactgccctcagaagaccttgactccagcggtctcacctctacagtgggctca
ggcctgcctgtggggagtggactggcctcagggggtaaagatggaattacgtggtccagc
acttctgaagttggtgggctgccctcgggaggtgagggcctagagacctctgctactgga
gtagaggacctcagtggactgccttctggagaaggtccagaaacctccacctctggagta
ggcgatctcagtggacttccttctggaagggaaggtctagagacctctgctactggagta
gaagacctcagtggactgccttctggagaaggtccagaggtctctgcctctggagtaggc
gatctcagtggacatccttctggaagggaaggtctggagacctctgcttctggagtagag
gacctcactggattgccttctggaggagaaggtcatctagagatttctgcctctggagta
ggggacctgagtggacttccttctggaggagagggtcatcttgagacctctgcctctgga
gtaggtgacctgagtggacttccttctggaagggaaagtctggagacctctacttctgga
gttggggatgacctcagtggactttattctggaagggagggtctagagacctctacctct
ggagctgaggacctcagtgggttgcattctggaagagaagacttgattgggtcagcttct
ggagccttggactttggcagaacaccttctggaactctaggaagtggacaagctccagaa
gcaagcggccttccctctggatttactggtgagtattctggaatagactttggaagtggc
ccatcctctggcctgcctgactttagtggacttccatctgggttcccaactgtctcccta
gtggatactacgttggtggaagtggtcacagccaccactgcaggtgaactggaagggagg
ggaaccattggcattagtggtgctggagaaatatctggggtgcccttcagtgagttggac
attagtggaggagctagcggactcccttcaggagctgaactcagtggccaggcatctgcg
tctcctgaaatcagtgggacaacatccggactctttggtgtcagcggacagccatcaggg
tttcctgacatcagtgggggaacatctgggctttttgagatcagtgggcagccaacaggg
tttccaggggaaatatctggagtacccgagcttagtggactgtcctccggacaaccagac
atcagtggagaagcttctggagttctttttggcagtggtcaaccatttggcataacggac
ctgagtggagaaatgtctggggtccctgacctcagtgggcaggcatcagggttgccagag
ttgagtggaacaacatctggaatccctgacctggtttccagtaccatgagtggcagtggt
gaaccttctggcattacatttgtggacatcagtttggttgaagtgactccaaccacattt
acagaagaaggtttagggtctgtggaactcagcggcctcccttctggggagacagatctc
tcgggcacatccgggatagcagacgtcagcggacagtcttctggagcagttgactccagt
gggtttacatcccagcctccagaattcagtggcctaccaagtggagtagcggaagtcagt
ggagaagcctctggagtggagatcggaagcagcctgccctcaggagcatatgatggcagt
ggacttccatcgggtttccccactgtctctctggtagacagaactttggtggaatctgta
acccacgctccaacagcccaagaagcaggagaagggccttcgggcattctggaactcagc
ggtgcccattctggagccccagacatgtctggagaccattctggagttttggacttaagt
gggctgcagcccaggctggtggagcccagtggagagccgtcaagtactccgtattttagt
ggggacttttctggcaccatcgatgtcagtggagaatcctctgcagccacaagcgccagt
ggggaggcctcgggacttccagaagttactttaatcacttcagagttcgtagaaggtgtt
actgaaccaactgtttcccaagaactcggccagagaccccctttgacccacacaccccag
ctttttgagtccagtggagaagcctctgcatctggggacatcagtggagctacagcaggg
tgctccggctctggagtagaagcgtcatcagtcccagaagccagcagcgagacgtctgcc
tatcctgagcctggggtaggggcgtctgctgcccctgaggccagcggaggagcttccggg
ttccctgatctgagtgaaaccacctctgccttccacgaagctgatgtggagggagcctca
ggcctgggagtgagtggcagcacctcggcctatcaggaaggactcacggagggctcgacc
accctggaagtgagtggggagtcgaccagcacctatgatgtgggtgtagaaacgtcaggc
tggccttcggccactcctgtggcttctggagacaggactgaaatcggcggagacctgtct
ggtcacacgtcggggctggatgttatcatcggcaccagtagcccagagtatgaatggacc
cagcagacccagcgccctgcagaggcgcatctagaaattgagtcctcaagtcccttgcac
tcaggagaagagacccagacagctgaaacagccacctccccaacagacgcttccatccca
acttctccgggaggaacagaagaatcggaggcaaccactgcaggggttgcagcccccgcc
aggtcctgtgctgaggagccctgtggcgctgggacctgccaggagacggagggacacgtc
atatgcctgtgcccccctggctacactggcgagcagtgcgacatagacattgacgagtgc
ctctcaagcccttgtcagaatggagccacctgcgtggatgccatcgagtctttcacatgc
ttatgccttcccagctaccgaggggacctgtgtgagatcgaccaggagctgtgtgaggag
ggctggaccaagttccagggccactgttaccgccacttccccgaccgcgagaactgggtg
gatgccgagagccggtgccgggagcagcagtcacacttgagcagcatcgtcacacccgag
gagcaggagttcgtcaacagtgagtgtagcggggtctccaggacctga
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