Rhinolophus ferrumequinum (greater horseshoe bat): 117019071
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Entry
117019071 CDS
T07722
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04014
Ras signaling pathway
rfq04015
Rap1 signaling pathway
rfq04024
cAMP signaling pathway
rfq04517
IgSF CAM signaling
rfq04519
Cadherin signaling
rfq04520
Adherens junction
rfq04530
Tight junction
rfq04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
117019071 (AFDN)
04015 Rap1 signaling pathway
117019071 (AFDN)
04024 cAMP signaling pathway
117019071 (AFDN)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117019071 (AFDN)
04519 Cadherin signaling
117019071 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117019071 (AFDN)
04530 Tight junction
117019071 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
117019071 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_2
RA_3
PDZ_2
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
117019071
NCBI-ProteinID:
XP_032956334
Ensembl:
ENSRFEG00010016618
LinkDB
All DBs
Position
3:1450823..1582496
Genome browser
AA seq
1914 aa
AA seq
DB search
MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI
RVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDAVPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQ
ASDKDDRPFQGHDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPKDYCIAR
VMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPGDKGILVFQLKRRPPDYIPKKTKKHV
DGKPVKGKDRAEGSGYGSALPPEKLPYLVELSPGRRNHFAYYSSHTSEDGSDSRDKPKLY
RLQLSVTEVGTEKFDDNSIQLFGSGIQPHHCDLTNMDGVVTVTPRSMDAETYVEGLRISE
TTVLQSGMKVQFGASHVFKFVDPSQDHALARRPAEGGLTVKGPRQKPGIVQETTFDLGGD
VHSGTALPTSKSTTRLDSDRGPSASSPAERGMVKPMVRVEHQEYRRQESRTQDAPGPEVT
LPASVEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERT
HKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITL
DAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMCLL
RRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQ
GLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAPDEPF
IPTDLIENVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPSGLQ
EFLDPLCQRGFCRLVPHARSPGTWTIYFEGADYESHLLHDNTDLAQPLRKEPEVITVTLK
KQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQER
AAELMTRTSSVVTLEVAKQGAIYHGLATLLSQPSPVMQRLSDRRGSGKPRPKSEGFELYN
NSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSAPAPGA
AARITSVSTGNLCTEEQLPPPRPEAYPIPTQTYAREYFTFPASKAQDRAAPPQNQWPNYE
ERPHVHLDSSHPSLAAQRITRSQEELREEKAYQLERHRIEAILDRKSDGDMWVHPSSSVG
SCTSSQEHLDHSSKSGTPASTLTKSGPGRWKTPAAVQPVPVAVSQPIRTDLPPPPPPPPV
HYAGDLDGLPMDLPLPPPPAGHMALPPAQVAAAERKKREEHQRWYEKEKARLEEERERKR
REQERKLGQMRTQALTPAQFSPVAGPPGKPEKPSTLQRPPETVIRELQPQQQPRTIERRD
LQYVTVSKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQSKADRSADDN
DRLRKLMLEWQFQKRLQESKQKDEDDDDEDDDDVDTMLIMQRLEAERRARQTAVPAISVL
DLLQDEERRRQQQLEEMRKREAEERARQEEERARLEEERARRDAEEKRRQEEGYYSRLEA
ERRRQHDEAERRLLEPEEPGLSRPPLPRGYEPPSPCPAANAPPPPPQRTASSLQAQALSP
DSLYTAKFVAYNEEEEEDGSPAGQDKYTGSTRSPPAAFKPRQPPCQPRPASDGIFLSNSF
QPPSASANSTARKAGQPLPPPKKASSFHPSHSKGRGPNSYTGSTGILIGAQDVYRDPREK
LSKSQDADLPGSSGAPENLTFRERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggccgcgacgaggagcggcggaagctggccgacatcatccaccactgg
aacgccaaccggctggacctgttcgagatcagccagcccaccgaggatttggagttccat
ggagtgatgaggttttattttcaagataaagctgctggaaactttgcaacaaagtgtatt
cgggtctccagtactgccaccactcaagatgtaatcgaaacactggcagagaagttccga
cctgacatgcggatgctgtcctctcccaagtactccctctacgaagtacacgtcagcgga
gaagaaagaagattggatatagatgagaaaccactggttgtgcagttgaattggaataaa
gatgatcgagaggggagatttgtccttaagaatgagaatgatgccgtccctcctaagaag
gctcagagtaatggacctgaaaagcaggaaaaagaaggtgttatccagaacttcaagaga
actctctcaaagaaagaaaagaaggagaaaaagaagagagaaaaggaagcaatgagacag
gcatctgataaagatgatagacctttccaagggcatgacattgagaattctcggctggct
gctgaggtttacaaagacatgcctgagaccagctttaccagaacgatttctaaccccgag
gtggttatgaaacgacgcaggcagcagaaactggagaagagaatgcaggaatttcggagc
tcagatgggcgacctgattcaggtgggacactgaggatttatgcagatagtttaaaacca
aatatcccctacaagaccatcttgctgtctactacggaccctgcggactttgcagtggcc
gaagctttggagaagtacggtctggaaaaagaaaaccctaaggattactgtattgcccgg
gttatgcttcctcctggagcccagcattctgatgaaaaaggtgctaaagaaattatactt
gatgatgatgagtgtcctttacaaatcttcagggaatggccaggtgacaaagggatttta
gtctttcaattgaagaggaggccaccagactacatcccaaagaaaacgaagaagcatgtg
gacgggaagccagtgaagggcaaggacagagccgaggggtccggctacggctctgcactt
ccacctgaaaagctgccttacctggtagagttaagcccagggagaaggaatcactttgcc
tactacagctctcacacttccgaagatggttctgactccagagataagccgaagctgtac
cgccttcagttaagtgtcactgaggtcgggacagagaagtttgatgacaattccatccag
ttgtttggttcaggaatacagccccatcactgtgacctcacgaacatggatggagttgtc
actgtcacccctagaagcatggacgccgagacctacgtggaaggactgcgcatctcagag
acgactgtgctgcaaagtgggatgaaagtgcagtttggggcatcgcatgtgtttaagttt
gtggaccccagccaggaccacgctctggccagacgacctgcggagggaggcctgaccgtg
aaggggccccgacagaaacctgggattgttcaggagacaacttttgatttaggaggagat
gtccatagtggaacagcattaccgacaagcaagagcaccacgaggctggacagcgacagg
ggaccgtctgcctccagccctgccgagcgagggatggtgaagcccatggtcagagtggag
catcaggagtaccgcaggcaagagagcagaactcaggacgctcctgggcctgaggtgacg
ctgcctgcaagcgtcgaattccgggaaagctctgaagattcatttttatctgccattata
aattatactaatagctctacagtccattttaagttgtcacctacatatgtattatatatg
gcatgtcggtatgtattgtccagccagtacagacctgatgtcagtcctacagaacgtact
cacaaagtgatcgcgatagtcaacaagatggtgagcatgatggaaggggtgattcaggaa
gtagaccaggttgatcagaaacagaagaacatcgcaggggcacttgctttctggatggca
aatgcatctgagctgctcaacttcattaagcaggatcgagacctcagccggatcaccttg
gatgcccaggatgttttagcacacttggtgcaaatggcgtttaagtacctggttcactgt
ctgcagtcagaactgaataattatatgccagccttcttggatgaccctgaagagaacagt
ctgcaaagaccaaaaatagacgatgttttgcacacgctcacgggcgcgatgtgtctgctg
cggcgatgcagggtcaatgcggccctgaccatccagctcttctctcagctcttccacttc
atcaacatgtggctgttcaacagactggtcaccgaccccgagtcggggctgtgctcccac
tactggggcgccatcatccgccagcagctgggacatgtggaagcatgggcggagaagcaa
ggcctggagctggctgccgactgtcatctcagcaggatagtgcaggcgaccactctgctt
acaatggacaagtatgcacctgatgacattcccaatataaacagcacctgctttaagtta
aattcattacaacttcaagccttattacagaattatcactgtgcacccgatgagcccttt
ataccgacggacctgatagaaaatgtggtggccgttgctgaaaacacggccgacgagctg
gcccgcagcgatgggcgggaagtgcagctggaagaggaccctgacctgcagctgcccttc
ctcctgcccgaggacggctactcctgcgacgtcgtccggaacatccccagcggcttacag
gagttcctggaccctctgtgccagagaggtttctgcaggttggttcctcacgcacgctca
ccaggtacctggacgatatattttgaaggtgcagattatgaaagtcaccttctacatgac
aacacggatctggctcagccgctgaggaaggaacctgaagtaatcactgtgaccctgaaa
aagcaaaatggaatgggccttagcatcgtcgcagcaaagggtgctggtcaagataaactt
ggaatctatgtcaagtctgttgtgaaaggaggtgctgcggatgtggacggccgtctcgct
gccggtgaccagctcctcagtgtggatggacgaagtctcgtaggactctctcaagaaagg
gccgcagagctcatgacaagaacaagttccgtggtgacactggaggtagcgaaacaagga
gccatctatcacggtctcgccaccctgctcagtcagccatccccagtgatgcaaagactt
tcagatcgccgcggctcaggtaaaccccgaccaaaaagtgaaggtttcgagctctataac
aattcagctcagaatgggtcacctgagagccctcagctgccgtgggcagaatatagtgaa
ccaaagaaactacccggtgatgacagactaatgaagaacagagccgatcaccgctccagc
cccaacgtagcaaatcagcctcccagtcccggagggaaaagtgcaccggccccgggagca
gcagccaggataacatccgtctccactgggaacctgtgcacggaggagcagctgcctccg
cctcgacccgaggcctaccccatccccactcagacgtacgccagagagtacttcaccttc
cccgcatccaaggcccaggaccgggcggctcctcctcagaaccagtggccaaactatgag
gagaggccacacgtgcacctggacagcagccatcccagcctcgcggctcagcgaattacc
cgttcccaagaggaacttcgggaagagaaagcctatcaactcgagcgacatcgaatagag
gccattctggaccgcaagtccgacggcgacatgtgggtccatccgagctcctccgtgggc
tcctgcacatcaagccaggagcacctggaccactcctccaaatcaggcacgcccgcgtcc
acgctcaccaagagcggccctgggcgctggaagaccccagcagccgtgcagcccgtgccc
gtggccgtgtcccagcccatccggacagacctgcccccgccacccccaccgcctcctgtg
cactacgccggagacttggatgggctccccatggatttgcctctgcccccgccccctgcc
ggccacatggcactaccgcctgctcaggtggctgccgcagagcggaagaagcgagaagaa
caccagcggtggtatgagaaggagaaggcccggctggaggaggagcgggagaggaagcgc
cgggagcaggagcggaagctgggccagatgcggacgcaggccctcacccctgcccagttc
tctccggtggccggccccccggggaagcccgagaagccttccacactgcagaggcccccc
gaaaccgtcattcgggaactgcagccccagcagcagccccgcacgatcgagcgcagagac
ctgcagtacgtcacggtgagcaaggaggagctgtcctcgggggacagcctgtccccagac
ccctggaagcgggacgccaaggagaagctggagaagcagcagcagatgcacatcgtggac
atgctgagcaaggagatccaggagctgcagagcaaggccgaccgctcggcggacgacaac
gaccgcctgcgcaaactcatgctcgagtggcagttccagaagcgactgcaggagtccaag
cagaaggacgaggacgacgatgacgaggacgacgacgacgtggacaccatgctcatcatg
cagcgcctggaggctgagcgcagagcgaggcagactgctgtgccagcaatctctgttcta
gatttgttacaggacgaagagcgaaggcggcagcagcagttagaagagatgcggaaacgg
gaagccgaggagcgcgccaggcaggaggaggagcgcgccaggctggaggaggagcgcgcc
aggcgcgatgctgaagaaaagaggcgacaggaagaagggtattacagccgcctggaagcc
gaaaggcgcagacagcacgacgaggccgagcgcaggttgctggagcctgaggagccgggt
ctgagcagacctccgcttccacggggctacgagcccccatccccgtgccctgcggctaac
gctcctccccccccacctcagcgcaccgcctcttccctgcaggctcaggccctctcccct
gactccctgtacaccgccaagttcgttgcatacaacgaagaggaggaggaggacggcagc
cccgcaggtcaggataagtacaccggctcgacaaggtctcctcctgccgcctttaagcca
cggcagcccccctgccagccgcgcccggcctccgatggcatctttctctccaactcattc
cagccaccctcggccagtgccaacagtactgctcgcaaagcaggccagcccctgccccct
ccaaaaaaagcgagcagcttccatcccagccactccaaaggtcgaggaccaaactcttac
acgggatctactgggattctcattggtgcccaggatgtgtatcgtgacccgagagagaaa
ctatccaaaagccaagatgcagatttacctggaagttcgggagcccctgaaaacttgaca
ttcagagagcgccagcgtcttttttcacaaggtcaagatgtgtctaataaagtaaaagcc
tctcgtaaattaacagaactggaaaatgaactgaacacaaaatga
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