Rhinolophus ferrumequinum (greater horseshoe bat): 117019456
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Entry
117019456 CDS
T07722
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04612
Antigen processing and presentation
rfq05145
Toxoplasmosis
rfq05152
Tuberculosis
rfq05164
Influenza A
rfq05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
117019456 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
117019456 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
117019456 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
117019456 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
117019456 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rfq01001
]
117019456 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rfq04054
]
117019456 (CIITA)
Enzymes [BR:
rfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117019456 (CIITA)
Protein kinases [BR:
rfq01001
]
Serine/threonine kinases: Other
TAF1 family
117019456 (CIITA)
Pattern recognition receptors [BR:
rfq04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117019456 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
117019456
NCBI-ProteinID:
XP_032957033
Ensembl:
ENSRFEG00010013899
UniProt:
A0A671FE15
LinkDB
All DBs
Position
15
Genome browser
AA seq
1211 aa
AA seq
DB search
MNHFQTILAQVRMLLSSHQPSQVQALLDNLLEEELLSREYHCALLHEPDAEALARKISLT
LLQKGDPDLALLKWAWSGLQVPASERALGYKDHGGSGQCAAMELEPLEGGYLELLNSSAD
PLQLYHLCDQLDLAGEEEIELCSEPDTDTINCEQFSRLLCAIEDDEETREAYANIAELDQ
YVFQDSQFEGLSKDIFIEHIGLEEIISESVDVLEEAGQKRQKRPFPEELPVDLKHRKLAE
PITVPVVTGTFLVGPVSDSSALPCPSPPALFSKDPASSQTQPEETTLPPAPPSGSLLSCL
SLPAGSFQIIPALPTLPQGLWQISGAGTGVSSIVIYQGEMPQTSQAPPSSSPAVHSLPKT
PERPGSTSPFAPSAADDLPSMPEAALTSRASTTEDELSPTQCPAASEVSSKLPKWPDSVE
QFCRSLRDKYQAEPAGPEGILVEVELVRARLERSSSKSQERELANLDWAERQPARGGLAE
VLLAASDRRQPRETQVIAVLGKAGQGKSCWARAVSRAWACGQLPQYDFVFHLSCHCLDRP
GDTYRLQDLLFSLGPQPLPVDSEVFGHILRRPDRVLLILDAFEELEAQDGLLHGACGPSA
AEPRSLRGLLAGLLQRKLLRGCTVLLTARTRGRLAQSLSKADALFQMPGFSAEQAETYVL
CYFERSGATHHQDRALALLQDQPLLLSHSHNPTVCRAVCQLSKALLELGQEAELPSTLTG
LYVGLLGPAARDSPPGALQALAKLAWELGRRHHSTLQEDQFPSEEVRTWAVARGLVQPVP
EAPEMELAFPSFLLQCFLGAVWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLV
GLVFQPRARCLGALAGPVALTLVDRKKKMLTRYLKRLQPGTLQAGRLLELLHCAHEALDA
GLWQHVVQGLPARLSFLGTRLTPPDTHVLGSTLQAAGRDFSLDLRNTGIDPSGLGSLVGL
SCVTHFRAALSDTVELWESLRQHGEAKLLQAVEDKFTIEPFKAKSMKDVEDLGNLVQIQR
TTSSSEDTARELPAVRDLKKLEFALGPVLGPQAFPKLVRILEAFSSLQHLDLDSLSENKI
GDEGVAQLSATFPQLKALETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNCICDV
GAESLAHVLPDMVSLRILDVQYNKFTASGAQQLTASLRKCPHVETLAMWTPTIPFGVQEH
LQQLDSRISLR
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctggctcaggtccggatgctgctctccagccatcagccg
agccaggtgcaggccctcctggacaacctgctggaggaggagcttctctccagggagtac
cactgcgccctgctccatgagcctgatgctgaggctctggccaggaagatctccttgacc
ctgctgcagaaaggagacccggacttggccctcttgaagtgggcctggagtgggctgcag
gtgccagcatccgagagggccctcggctacaaggaccatggtggcagtggacagtgtgcc
gccatggagttggagcctctagaaggtggctacctggagctccttaacagcagtgctgac
cctttgcagctctaccacctctgtgaccagttggacctggctggggaagaagagatcgag
ctctgctcagaacccgacacagacaccatcaactgtgaacagttcagcaggctgttgtgt
gccatagaagatgatgaagagaccagggaagcgtatgccaatatcgccgaactggaccag
tacgtgttccaggactcccagttcgagggcctgagcaaagacattttcatcgagcacata
ggattggaagaaataatcagcgagagtgtggacgtgctggaggaagcaggacaaaaacgt
cagaaaagacccttcccagaggagctgcctgtggacctgaagcacaggaagctcgccgag
cccatcaccgtgcccgtggtgactggtactttcctggtggggccagtgagtgactcctca
gctctgccctgcccgtcaccacctgctctgttcagcaaggatccggcatccagccagacc
cagccggaagaaaccaccctgccacccgcgcccccctccggctccttgttgagctgcctg
agtctcccggctggatccttccagatcatccccgctctccccactctgccccaggggctc
tggcagatctcaggcgctgggacaggcgtctccagtatagtcatctaccaaggtgagatg
ccccagaccagccaagcacccccatccagcagtccagctgtccacagcctcccgaagacc
cctgagcggcccggctccaccagccccttcgccccatccgcagctgatgacctgcccagc
atgccggaagcagccctgacctcccgtgcaagcacaacagaggatgagctgtcccccacc
caatgcccggcagcttccgaggtttccagcaagcttccaaaatggcctgacagtgtggag
caattctgccgctccctacgggacaagtaccaggctgagcccgcaggcccggaaggcatc
ctggtggaggtggagctggtgagggcacggctggagaggagcagcagcaagagccaggag
agggagctggccaacctggactgggcagagcggcagccggcccgcggggggctggctgag
gtgctgctggctgccagtgaccgccggcaaccacgtgaaacgcaggtgattgccgtgctg
ggcaaggcaggacaggggaaaagctgctgggcccgggcggtgagccgggcctgggcctgt
ggccagctgccgcagtacgatttcgtcttccacctgtcctgccactgtttggaccggcca
ggggacacctaccgcctgcaggaccttctcttctccctgggcccgcagccactgccggtg
gacagtgaagtctttggtcatatcttgaggaggcccgaccgcgtcctgctcatcctggac
gccttcgaggagctggaagcccaggacggcctcctgcacggtgcatgcggaccctcggcg
gccgagccccgctcgctccgggggctgctggccggcctcctccagcgcaaactgctccgg
ggctgcactgtgctgctcacagcccggacccggggccgcctggcccagagcctgagcaag
gcggatgccctgttccagatgcccggcttctcagctgagcaggccgagacctatgtgctg
tgctactttgagcggtcgggggccactcaccaccaagacagagccctggcgctcctccag
gaccagccacttctcctcagtcacagccacaaccccacggtgtgccgggcagtgtgccag
ctgtcaaaggccctcctggagctgggacaggaggccgagctgccctccacgctcacggga
ctctacgttggcctgctaggcccagcagcccgggacagccccccaggggccctgcaggca
ctggccaagctggcctgggagctgggccgcagacaccacagcaccttgcaggaggaccag
tttccatcggaggaggtgaggacctgggctgtggccagaggcttggtgcagcctgtgccc
gaggccccagagatggagctggccttccccagcttccttctgcagtgcttcctgggagcc
gtgtggctggctctgagcagtgagattaaggacaaggagttgccacaatatttggcactg
accccgaggaagaagaggccctatgacaactggctggagggcgtgccgcgctttctggtc
gggctggtcttccagcctcgcgcccgctgcctgggagccctggcggggccagtggcgctc
accttggtggacagaaagaagaagatgctcaccaggtacctgaagcggctgcagccgggc
acactgcaggcagggcggctgctagagctgctgcattgtgcccacgaggcgctggatgct
ggcctttggcagcatgtggtgcaggggctccccgcccgtctctccttcctgggcacccgt
ctcacgcctccggatacccatgtgctgggcagcaccctgcaggctgcgggccgcgacttc
tccttggacctccgtaacactggcattgacccctctggactgggaagcctcgtgggactc
agctgtgtcacccatttcagggccgccttgagtgacacggtggagctgtgggagtcccta
cgacagcatggggaggccaagctactccaggcggtagaagacaagttcaccattgagcct
ttcaaggccaagtccatgaaggatgtggaagacctgggcaaccttgtgcagatccagagg
acaacaagttcctcagaagacacagctagggaactccccgctgtccgggacctaaagaag
ctagagtttgcgctgggccctgtcttgggcccccaggctttccctaaactggtgaggatc
ctcgaggccttttcctcccttcagcatctggacctggactcactgagtgagaacaagatt
ggggacgagggtgtcgcgcagctctcagccaccttccctcagctgaaagccctggagaca
ctgaacctgtctcagaacagcatcacggacgtgggcgcctgcaagctcgcagaggccctg
ccctccttggctgcatccctccttaggctgagcttgtacaataactgcatctgtgacgtg
ggagccgagagcctggcacacgtgcttccagacatggtgtccctgcggatcctggatgtc
cagtacaacaagttcacggcctccggggcccagcagctcacagccagcctgagaaagtgc
cctcatgtggagacgctggcgatgtggacgcccaccattccgtttggcgtccaggagcat
ctgcagcagctggactctcggatcagcctgagatga
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integrated database retrieval system
