Rhinolophus ferrumequinum (greater horseshoe bat): 117019459
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Entry
117019459 CDS
T07722
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117019459 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117019459 (GSPT1)
03012 Translation factors [BR:
rfq03012
]
117019459 (GSPT1)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117019459 (GSPT1)
Translation factors [BR:
rfq03012
]
Eukaryotic type
Release factors
117019459 (GSPT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117019459
NCBI-ProteinID:
XP_032957041
Ensembl:
ENSRFEG00010014688
UniProt:
A0A671FA47
LinkDB
All DBs
Position
15:complement(11175088..11202805)
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AA seq
640 aa
AA seq
DB search
MDPGSGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGAAGSASGPLVAAAAEAQR
EHLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQPPPPSAGAAANNHGAGSGAGGPS
APVEPSQEEQSLCEGSNSAVSMELSEPVVENGETEMSPEESWEHKEEISEAESGVGSLGD
GRPPEENAQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTG
MVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDA
PGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLI
NKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWY
IGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKH
NVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVI
IEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRT
AGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagtggtggtggcggcggcggcggcgggagcagcagcggcagcagcagc
agcgactcggcgcccgactgctgggaccaggcagacatggaagcccctgggccggggccg
tgcggcgccgccggcagcgccagcggccccttggtggcggctgcggccgaggcccagcgt
gaacatctcagtgcggccttcagccggcaactcaacgtcaacgccaaacccttcgtgccc
aacgtccacgccgctgagttcgtgccgtccttcctgcggggcccggcccagccgccacca
ccctcagctggcgccgccgccaacaaccacggagccggcagcggcgcgggaggcccttcg
gcacctgtggaaccttctcaagaggaacagtcgttgtgtgaaggttcaaattcagctgtt
agcatggaactttcagaacctgttgtagaaaatggagagacagaaatgtccccagaagaa
tcatgggagcacaaagaagaaataagtgaagcagagtcaggggttgggtccttgggagat
ggaaggcctccagaagaaaatgcccaagaaatgatggaggaggaagaggaaataccaaaa
cctaaatctgtggttgcaccaccaggtgctcctaaaaaagaacatgtaaatgtggtattc
attgggcatgtagatgctggcaagtcaaccatcggagggcaaattatgtatttgactgga
atggttgacaaaaggacgcttgagaaatatgaaagagaagctaaagaaaaaaacagagaa
acttggtacttgtcatgggccttagacacaaatcaggaagaacgagacaagggtaaaaca
gtagaagtgggtcgtgcctactttgaaacagaaaaaaagcatttcacaattctagatgcc
cctggccacaagagttttgtcccaaatatgattggtggtgcttctcaagctgatttggct
gtactggtaatctcagccaggaaaggagagtttgaaactggatttgaaaaaggaggacag
acaagagaacatgcaatgttggcaaagacagcaggtgtaaaacacttaattgtgctcatt
aataagatggatgacccaacagtgaattggagcaacgagagatatgaagaatgtaaagag
aaactagtgccatttttgaaaaaagttggcttcaatcccaaaaaggacatccactttatg
ccctgctcaggactgactggagcaaatcttaaagagcagtcagatttctgtccttggtac
attggattaccatttattccatatctggataatttgccaaacttcaatcgatcagttgat
ggaccaatcaggctgccaattgtggataagtacaaggatatgggcactgtggttctggga
aagctggaatcaggatccatttgtaaaggccagcagcttgtgatgatgccaaacaagcac
aacgtggaagttcttggaatcctttcagatgatgtagaaactgattctgtagccccaggt
gaaaacctcaaaatcagactgaaaggaattgaagaagaggagattcttccaggattcatc
ctttgtgatcccaataatctttgtcattctggacgcacatttgatgcccagatagtgatt
atagagcacaaatccatcatctgcccaggttataatgcagtgctgcatattcatacctgc
attgaggaagtcgaaataacagccttaatttgcttggtagacaagaaatcaggagaaaaa
agtaagactcgaccccgttttgtgaaacaagatcaagtatgcattgctcgcttaaggaca
gcaggaaccatctgccttgagacctttaaagatttccctcagatgggtcgatttacctta
agagatgagggtaagaccattgcaattggaaaagttctgaaattggttccagagaaagac
taa
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