Rhinolophus ferrumequinum (greater horseshoe bat): 117019581
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Entry
117019581 CDS
T07722
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin-2
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq05014
Amyotrophic lateral sclerosis
rfq05017
Spinocerebellar ataxia
rfq05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117019581 (ATXN2L)
05017 Spinocerebellar ataxia
117019581 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
117019581 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117019581 (ATXN2L)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117019581 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
117019581
NCBI-ProteinID:
XP_032957401
Ensembl:
ENSRFEG00010019468
LinkDB
All DBs
Position
15:1220989..1233277
Genome browser
AA seq
1083 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPAPLASTSAPPGPPAATSPCLG
PAAAAGSGLRRGPEGILAPQPPPPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYN
NSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDI
VDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSD
DYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQL
AREIESSPQYRLRIAMENDDGRTEEEKHSGVQRQGSGRESPSAVSREGKYIPLPQRVREG
PRGGVRCSSSRGGRPGLSSLPPRGPHHLDSSSPGPGSETRGINGGPSRMSPKAQRPLRGA
KTLSSPSSRPSGESSVPPAAPAAFPFLPVGRMYPPRSPKSAAPAPVSPSCPESPIGSAVP
TSSASIPVTSSIVDPGVGSISPASPKISLASADVKELAAKEPGRTLESQELSRISGKVPG
LQNEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLTSEAM
GSPVSSKTESMLDKEDKPPLPAAGGTEGPEQPPAPCPSQTGSPPLGLKADEKDDGPVAEQ
VKKSTLNPNAKEFNPAKPLLSVNKSTSTPTSPGPRTHPTPSIPVLTAGQSGLYSPQYISY
IPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAA
AGPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQA
IVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSP
VQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQ
LPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPA
LSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRAEGLQVGQDARVL
GGE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggcctcctgggggcaccagccctcccaacggcggcctcccggcg
cccctggcctccacctcggctcccccagggcctcccgcggccacttccccctgcctgggg
cctgcagccgctgccgggagcgggctccgccggggacccgagggcatcttggcgccccag
ccgccgccaccgcagcagcaacatcaggagaggccaggggcagcggccatcggcagcgcc
aggggacaaagcacaggaaagggacccccacagtcaccggtgtttgagggtgtctacaac
aattccagaatgctgcacttccttacagctgtggtgggctccacctgtgatgtaaaggtg
aagaatggcaccacctatgaaggtattttcaagactctgagctcaaagtttgaactagcc
gtggatgctgtgcaccggaaagcgtctgagccagcaggtggccctcgtcgcgaagacatt
gtggacaccatggtctttaagccgagtgacgtcatgctcgtccacttccgaaatgtggac
ttcaattacgccacgaaagataagttcaccgattcggccatcgccatgaactcgaaggtg
aacggggagcacaaggagaaggtgcttcagcgctgggagggcggcgacagcaacagcgac
gactacgacctggagtctgacatgtccaatggatgggatcccaatgaaatgttcaagttc
aacgaggagaattacggtgtaaagaccacttatgacagcagtctctcttcttacacggtg
cccttagagaaggacaactccgaggagtttcgtcagcgggagctgcgtgcagcccaattg
gctcgcgagattgagtcgagcccccagtaccgcctgcggatcgccatggagaacgatgat
gggcgcactgaggaggagaagcacagtggggtccagcggcagggctcgggccgggagagt
cccagtgcggtgtccagggagggaaagtatatccctctgccccaacgagttcgggaaggc
ccgcggggcggagttcggtgcagtagttctcggggcggccggcctggtcttagctctttg
ccacctcgtggccctcaccatcttgacagtagcagccctggccccggttctgagacacgt
ggtatcaacggaggcccttcccgcatgtcccctaaggctcagcgacctctgagaggtgcc
aagactctgtcttcacccagcagcaggccttctggagaatcttctgttccacctgctgct
cctgcagctttcccttttcttccagtgggccggatgtaccccccacgctctcccaagtcg
gctgcccctgcccccgtctcaccttcctgccctgaatctcccatcggctcagcagtaccc
acctcttcagcttccatccctgtgacgtcatcaattgtggaccctggagtaggctccatt
tccccagcttctccaaagatctcactggcctccgcagatgtaaaagaacttgcagccaag
gagcctgggaggactctggagtcccaggagctgtcccggatatctgggaaggtccctggc
cttcagaacgaacagaaacgttttcaactggaagaactgagaaagtttggggcgcagttt
aagcttcagcccagtagctctcctgagacgagcctggatccttttcctccccggatctta
aaggaggaggccaaagggaaggagaaggaagttgatggcctgttgacctcagaggccatg
gggtccccggtctcttccaagacagagtccatgttggataaggaggacaagccgcctctg
ccagcagcgggaggcacggaggggcccgagcagccccccgccccttgcccaagccaaact
ggcagccccccgctgggcctcaaggccgacgagaaggatgacggccccgttgctgaacaa
gtgaagaagtcaacgctgaaccccaacgccaaggagttcaatcccgcgaagcccttgctg
tctgtgaataaatccaccagcactcccacttctccggggccccggacgcatccaaccccc
tccatcccggtgctgacagcaggccagagtgggctgtacagcccccagtacatttcctac
atacctcagatccacatgggaccagctgtgcaggcacctcagatgtatccgtatcctgta
tccaactcagtgcctgggcagcagggcaagtaccggggcgccaaaggctccctgcccccc
cagcgctcggaccaacaccagccagcctctgcccctccaatgatgcaggccgctgccgcc
gccggccctcctctggtggccgccacaccttactcttcctacatcccctacaaccctcag
cagttcccgggccagcccgccatgatgcagcccatggcccactacccctcacagccggtt
ttcgcccccatgcttcagagcaacccacgcatgctgacgtcagggagccacccgcaggcc
atcgtgtcgtcgtccacccctcagtacccgtctgcggagcagcccaccccccaggccctg
tacgccactgttcaccagtcctatccacaccatgccacgcagctccatgcccaccagccg
cagccggccaccacgccgactgggagccagccacagtcccagcatgcagcccccagtcct
gtccagcaccaggcggggcaggccccacacctgggcagtggacagccgcagcagaatctg
taccacccaggggcgctgacaggcacgccgccttctctgccaccgggaccgtctgcccag
tcccctcagagcagcttcccccaaccagctgctgtgtatgccatccatgcccaccagcag
ctgccccacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatc
acagcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcat
ccaccccagagtcatggggggcccccccaaggcgcggtgccccagagtggggtgcctgca
ctctcagcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcct
ggccaggcgcctggatttccaggaggagccgatgacaggattcgtgagttctcgttagct
gggggaatttggcatggaagagctgaggggctgcaggtggggcaggatgctcgggttctg
ggcggggagtga
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