Rhinolophus ferrumequinum (greater horseshoe bat): 117019581
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Entry
117019581 CDS
T07722
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq05014
Amyotrophic lateral sclerosis
rfq05017
Spinocerebellar ataxia
rfq05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117019581 (ATXN2L)
05017 Spinocerebellar ataxia
117019581 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
117019581 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117019581 (ATXN2L)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117019581 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
117019581
NCBI-ProteinID:
XP_032957401
Ensembl:
ENSRFEG00010019468
LinkDB
All DBs
Position
15
Genome browser
AA seq
1083 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPAPLASTSAPPGPPAATSPCLG
PAAAAGSGLRRGPEGILAPQPPPPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYN
NSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDI
VDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSD
DYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQL
AREIESSPQYRLRIAMENDDGRTEEEKHSGVQRQGSGRESPSAVSREGKYIPLPQRVREG
PRGGVRCSSSRGGRPGLSSLPPRGPHHLDSSSPGPGSETRGINGGPSRMSPKAQRPLRGA
KTLSSPSSRPSGESSVPPAAPAAFPFLPVGRMYPPRSPKSAAPAPVSPSCPESPIGSAVP
TSSASIPVTSSIVDPGVGSISPASPKISLASADVKELAAKEPGRTLESQELSRISGKVPG
LQNEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLTSEAM
GSPVSSKTESMLDKEDKPPLPAAGGTEGPEQPPAPCPSQTGSPPLGLKADEKDDGPVAEQ
VKKSTLNPNAKEFNPAKPLLSVNKSTSTPTSPGPRTHPTPSIPVLTAGQSGLYSPQYISY
IPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAA
AGPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQA
IVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSP
VQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQ
LPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPA
LSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRAEGLQVGQDARVL
GGE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggcctcctgggggcaccagccctcccaacggcggcctcccggcg
cccctggcctccacctcggctcccccagggcctcccgcggccacttccccctgcctgggg
cctgcagccgctgccgggagcgggctccgccggggacccgagggcatcttggcgccccag
ccgccgccaccgcagcagcaacatcaggagaggccaggggcagcggccatcggcagcgcc
aggggacaaagcacaggaaagggacccccacagtcaccggtgtttgagggtgtctacaac
aattccagaatgctgcacttccttacagctgtggtgggctccacctgtgatgtaaaggtg
aagaatggcaccacctatgaaggtattttcaagactctgagctcaaagtttgaactagcc
gtggatgctgtgcaccggaaagcgtctgagccagcaggtggccctcgtcgcgaagacatt
gtggacaccatggtctttaagccgagtgacgtcatgctcgtccacttccgaaatgtggac
ttcaattacgccacgaaagataagttcaccgattcggccatcgccatgaactcgaaggtg
aacggggagcacaaggagaaggtgcttcagcgctgggagggcggcgacagcaacagcgac
gactacgacctggagtctgacatgtccaatggatgggatcccaatgaaatgttcaagttc
aacgaggagaattacggtgtaaagaccacttatgacagcagtctctcttcttacacggtg
cccttagagaaggacaactccgaggagtttcgtcagcgggagctgcgtgcagcccaattg
gctcgcgagattgagtcgagcccccagtaccgcctgcggatcgccatggagaacgatgat
gggcgcactgaggaggagaagcacagtggggtccagcggcagggctcgggccgggagagt
cccagtgcggtgtccagggagggaaagtatatccctctgccccaacgagttcgggaaggc
ccgcggggcggagttcggtgcagtagttctcggggcggccggcctggtcttagctctttg
ccacctcgtggccctcaccatcttgacagtagcagccctggccccggttctgagacacgt
ggtatcaacggaggcccttcccgcatgtcccctaaggctcagcgacctctgagaggtgcc
aagactctgtcttcacccagcagcaggccttctggagaatcttctgttccacctgctgct
cctgcagctttcccttttcttccagtgggccggatgtaccccccacgctctcccaagtcg
gctgcccctgcccccgtctcaccttcctgccctgaatctcccatcggctcagcagtaccc
acctcttcagcttccatccctgtgacgtcatcaattgtggaccctggagtaggctccatt
tccccagcttctccaaagatctcactggcctccgcagatgtaaaagaacttgcagccaag
gagcctgggaggactctggagtcccaggagctgtcccggatatctgggaaggtccctggc
cttcagaacgaacagaaacgttttcaactggaagaactgagaaagtttggggcgcagttt
aagcttcagcccagtagctctcctgagacgagcctggatccttttcctccccggatctta
aaggaggaggccaaagggaaggagaaggaagttgatggcctgttgacctcagaggccatg
gggtccccggtctcttccaagacagagtccatgttggataaggaggacaagccgcctctg
ccagcagcgggaggcacggaggggcccgagcagccccccgccccttgcccaagccaaact
ggcagccccccgctgggcctcaaggccgacgagaaggatgacggccccgttgctgaacaa
gtgaagaagtcaacgctgaaccccaacgccaaggagttcaatcccgcgaagcccttgctg
tctgtgaataaatccaccagcactcccacttctccggggccccggacgcatccaaccccc
tccatcccggtgctgacagcaggccagagtgggctgtacagcccccagtacatttcctac
atacctcagatccacatgggaccagctgtgcaggcacctcagatgtatccgtatcctgta
tccaactcagtgcctgggcagcagggcaagtaccggggcgccaaaggctccctgcccccc
cagcgctcggaccaacaccagccagcctctgcccctccaatgatgcaggccgctgccgcc
gccggccctcctctggtggccgccacaccttactcttcctacatcccctacaaccctcag
cagttcccgggccagcccgccatgatgcagcccatggcccactacccctcacagccggtt
ttcgcccccatgcttcagagcaacccacgcatgctgacgtcagggagccacccgcaggcc
atcgtgtcgtcgtccacccctcagtacccgtctgcggagcagcccaccccccaggccctg
tacgccactgttcaccagtcctatccacaccatgccacgcagctccatgcccaccagccg
cagccggccaccacgccgactgggagccagccacagtcccagcatgcagcccccagtcct
gtccagcaccaggcggggcaggccccacacctgggcagtggacagccgcagcagaatctg
taccacccaggggcgctgacaggcacgccgccttctctgccaccgggaccgtctgcccag
tcccctcagagcagcttcccccaaccagctgctgtgtatgccatccatgcccaccagcag
ctgccccacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatc
acagcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcat
ccaccccagagtcatggggggcccccccaaggcgcggtgccccagagtggggtgcctgca
ctctcagcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcct
ggccaggcgcctggatttccaggaggagccgatgacaggattcgtgagttctcgttagct
gggggaatttggcatggaagagctgaggggctgcaggtggggcaggatgctcgggttctg
ggcggggagtga
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