Rhinolophus ferrumequinum (greater horseshoe bat): 117019688
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Entry
117019688 CDS
T07722
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117019688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfq02000
]
117019688
Transporters [BR:
rfq02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117019688
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
RsgA_GTPase
AAA_15
Rad17
AAA_29
AAA_27
MSG
Motif
Other DBs
NCBI-GeneID:
117019688
NCBI-ProteinID:
XP_032957642
Ensembl:
ENSRFEG00010021960
LinkDB
All DBs
Position
15:16399694..16469155
Genome browser
AA seq
1683 aa
AA seq
DB search
MDLSGLNTLMILLWKNFIFKRRQFVTVVVEIILTLLFAGALLLTRRYTTIKKSGPFYYSP
QPVDELPLFLRPVPFTGLWELAFVPSKSVVVKDIVETVKKDLQLDFKVQGFSSEREFEDY
VEQKNNTKRVLVAFVFDHEFKNSDDPLPLKVKYSLRLSRFQKNKYGIYVQPRSGETDVLF
PASPLMGSRKVHDSSWGHPGYITKGFLLIQHALDRAIMKYHNHSAAEQLFKDVSVFIQSF
PQEIYYNDSFFKFFGFFVPLVFLMIFSMNHFTLVQSIVWEKENRLKEYQLMIGLSNWKLW
AAYFFTFLTFYSVVILLMCLVFFAKVKPVPIIQYSDPSLVFVFLLCFAIATIFFSFMVST
FFSKVNFAVSVGGFIYFFTYFPATNMSPDFAHMTLIQKVAAFLSSNVIMALGTKFLVMAE
MDGIGIKWSNIFSPITVENFVFANVLGMFFFVAVLYGLVAWYIEAVFPGEYGVAKPWYFF
LLRSHWCGKKPKGKNETKQFNDTTESKYFESEPTDLVAGIQLQHLYKEFRVEKTTKIAIR
DLTLNLYEGQISVLLGPNGAGKSTTLSILSGLFPATSGEAYVNGYEISRQMVQIRKSLGL
CPQQDLLFNYLTVSEHLYFYSVIKGVPRKMCLKEIRSMLSTFNLIEKRNAFPESLSGGMK
RKLSIMIALIGVSKVVILDEPTAGMDPISRIATWGLLQKYKQDRTILLTTHYMDEADILG
DRIAIMVKGTVRCCGSSVFLKQIYGVGYHITMVKEPHCNVEEISKLIYHYIPSATLEKDV
KNELSFTLPKTYTHSFEALFTDLEKRQAELGIASFGASISTMEEVFFRVSDLEDSQTDIP
ATQRQPPSLMNEVSLTNQNKNMSRNERADSSTMKESPAILFNTGCALYQQQFWAMLFKRA
MFNWRNWKLIFLQILAVLISLLFLCEMETVSSDDDDGKTRLMDLNQYGQTIVPLSISGNS
NLTLVFLKHLKSMLEPGKHTLMEVQGDLLEYLMEDKDCIQLCIVAFSIEVKADGIIFTGL
FNNEASHSPPLTLSMVDNVLFMSVSGPEASLTVSNKPQPYSSHKGHEDMLLDGYQLALDI
HFGMAVLTSGFCLLTVTERVSKAKHLQFMSGVYILVYWLSALLWDLILFFITCLLLLGVL
KYCQRDIYLTDYHFLDTMLIFMLYGWSAIPIVYLLSFLFTKSSSAYIKLVLLNYLSGFFG
LLIDSVLTFDTPPNMSNATRNFVLKSLLLFPNYNLAKCIIDYAAFHQMKKMCALENASAY
LNCDKKITTKSVYSLEEKMLGKYLIMMSVIGFVCFLLVFFWEKTLWKLRTFFNQCIFFGI
YKKNRKEKVCKELSGECEDEDVENERKRILGQPQEVLNSAVLIKELTKIYFKSRVILAVK
NISVAVQKGECFGLLGFNGAGKTTTFQILTGEETATSGDVFIGGFNITDNIEKVKCRVGY
CPQSDALVEYMTGRELIVMYARLWGVSESQIQLYVNKWLTSLQLEPHADKIISTYSGGTK
RRLSALIALMGKTSVILLDEPSTGMDPVARRLLWDAVTLARGSGKAIIITSHRMEECDAF
CTRLAIMVRGKFMCLGSPQHLKSKFGNIYILKVKVQMNTQKHELDDLKVFITETFPGSVL
KQEHQGILNYYIPSKDNSWAKVFGILEEAKKRFNLEDYSASQIMLEQVFLSFASLQNTED
DQT
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtcggggttgaacacacttatgattcttctgtggaagaattttatttttaag
agacggcagtttgttactgtagttgtggaaatcatcctgacgttactgtttgctggtgca
cttttgttaacacgcaggtatactactatcaagaagtctggaccgttctattactctcct
cagcctgttgatgagttgcctttattcctcagaccggtcccttttactggtctgtgggaa
ctggcctttgtgccttccaaaagtgtcgtggtgaaggatatcgttgaaaccgtgaaaaag
gacttacaattggattttaaagttcaaggcttttcttcagaaagagaatttgaagattac
gtggagcaaaagaataacactaaacgcgtattggttgctttcgtttttgaccatgagttc
aaaaatagcgatgatcccctgccactcaaggtaaaatattctctgcgtttaagtcgtttt
cagaagaacaagtatgggatatatgtccaaccccgaagcggggagacagatgttctcttt
ccagcttctcctttaatgggatccagaaaggtgcacgactcaagttggggtcatcctggg
tacatcacgaaagggttcctgcttatacaacacgccctggacagagccatcatgaagtac
cataatcacagcgccgcagagcagctgttcaaagatgtcagcgttttcattcagagtttc
ccacaagaaatatattacaacgattccttctttaagttttttggttttttcgtcccttta
gtcttcttaatgatcttctctatgaatcatttcaccctcgttcaatccattgtgtgggaa
aaggaaaaccgattgaaggagtaccagctcatgattggactcagtaattggaagctctgg
gcggcctatttcttcacattcctcacgttttattccgtcgtcatcttgctgatgtgcctc
gttttctttgccaaggtgaaacctgtgcccatcatccagtacagcgacccatctctggtc
tttgtgtttttgctgtgtttcgccatcgccaccatcttcttcagcttcatggtcagcacg
tttttcagtaaagtaaattttgctgtatctgttggaggtttcatttattttttcacctac
ttcccagctaccaacatgtccccagattttgcacacatgacactcatccagaaggtggct
gcctttctcagctcaaatgttatcatggcactgggaactaaattcctagtgatggcagaa
atggacggaataggaattaaatggagtaacattttctcgccaatcacagtggagaatttt
gtctttgccaatgtactgggaatgtttttctttgttgctgtcttatatggcctcgtggcc
tggtatatcgaagcagtctttccaggagagtacggcgtggccaaaccgtggtactttttc
ttgctgcgctcacactggtgtgggaaaaaacctaagggaaaaaatgaaacaaagcaattc
aatgacacaacggaaagcaagtattttgaaagtgaacctactgatttggtggcaggtatc
cagctccaacatttgtacaaggaatttcgagtggagaaaactaccaagatagctataaga
gacttgaccttgaatttatatgaggggcagatcagtgttcttctaggacctaatggggca
ggaaaatccactactttatccattctctcaggtctcttccctgctaccagcggagaggcc
tatgtgaatggatatgagatctcaaggcagatggtccagatcaggaaaagcttgggcttg
tgtccccagcaggacctgctgtttaattacttgacagtgtcagaacacctgtatttctac
agtgtgatcaaaggagtccctcgaaagatgtgtcttaaggaaattagatctatgctgtct
acatttaacctgatagagaagcgcaatgcatttccagagtccctgagtggaggaatgaaa
cgcaaactctccatcatgatagcacttataggagtctccaaggttgtgatacttgacgag
ccaacagctggcatggaccccatctcaaggatagccacctggggtctccttcagaagtat
aaacaggatcgtaccatcttgctgaccacccattacatggacgaagctgacatcctgggt
gaccgcatagccatcatggtgaagggaaccgtgcggtgctgtggctcttcagtcttcctg
aaacaaatatatggtgtgggataccacataaccatggtgaaggaacctcactgcaatgtt
gaagaaatctccaaattgatttatcattatataccatcagccaccttggagaaggatgtg
aaaaatgaactatcttttactctacccaaaacgtacacacacagctttgaagctctgttc
actgatctggaaaaaagacaggcagagctgggcattgccagctttggtgcctccatcagc
accatggaagaagtgttcttcagggttagtgatttggaagattcacaaacagatatccca
gctacccaacgtcaacctccctctctgatgaatgaagtgtcactcacaaaccagaataag
aatatgtccagaaatgagagagcagattcttctaccatgaaagaaagccctgctattctg
tttaatactgggtgcgccctctaccagcagcagttctgggccatgctcttcaaaagggca
atgttcaattggcgcaactggaaactgattttcctgcagatattggcagtgctcatctcc
cttctctttctctgcgagatggagacggtttcatctgatgatgatgatggaaagaccaga
ctcatggatttgaatcaatatggtcaaaccattgtgcctttgtctatttctgggaattct
aatttgactctggttttcttaaaacatcttaagagtatgctggaacctggcaagcacaca
cttatggaagtacaaggagacctactggaatacttgatggaagataaagattgtattcag
ttatgcattgttgcattttccattgaggtgaaggccgatggaataatatttactggtctg
ttcaacaatgaagcatcccattcaccacccctgacgctctcaatggtagacaacgttctt
ttcatgtcagtttctggccctgaagcttccttaaccgtctccaataagcctcagccgtac
tcgagtcataaagggcatgaagacatgttgttggatggataccaactggccttagacata
cattttggcatggccgttttgaccagtggcttttgtctcctgacagtgactgagagagtc
tctaaggccaagcacctgcagttcatgagtggggtctatatccttgtgtactggctgtct
gctcttctgtgggatctcatcctcttcttcattacctgcctcttactcctgggagtgtta
aaatactgccaaagggatatatacctgacagattaccacttcctggacacaatgctgatc
ttcatgctgtacggctggtctgccattcccatcgtgtacctgctgagcttcctgttcacc
aaaagcagttctgcctacatcaaactggtgctgttgaactacctctcgggctttttcggt
ctcctcatagattccgtgcttacattcgatactccgccaaacatgtcaaatgccaccaga
aacttcgtgcttaaatcgttactgctctttcccaattacaacctggccaagtgcatcatt
gactatgctgccttccaccagatgaagaaaatgtgcgctctagaaaacgctagtgcctat
ttaaattgtgataaaaaaattactacaaagagtgtttattctttggaagagaaaatgctt
ggaaagtatctgatcatgatgagtgtcataggctttgtttgctttctcttggttttcttt
tgggagaagactttgtggaaactaagaacatttttcaatcaatgcattttctttggtatc
tataagaagaacaggaaggaaaaggtgtgcaaggaattatctggagaatgtgaagatgaa
gacgtggaaaatgaaagaaagagaatcctggggcagccgcaggaagtgctgaattccgcg
gtgcttattaaggagcttacaaagatatattttaagtcccgggtcattctggctgtgaaa
aatatctccgtcgcagtccaaaagggggagtgctttggattgcttggattcaatggagct
ggaaaaactactacctttcaaattttgactggagaagagactgctaccagtggggatgtg
ttcattggtggttttaacatcactgacaatatcgagaaggtgaagtgcagagtcggctat
tgtcctcagtcggacgccttggtggaatacatgacaggtcgggaattaatcgtcatgtac
gccagattatggggagtctccgagtcccagattcagctctatgtgaacaaatggttgact
tcactgcaactggagcctcatgctgacaagattatcagcacctacagtggaggaaccaaa
cgtaggctgagtgctcttattgccctaatgggaaaaacttcagtcattttgctggatgag
ccatcaactggcatggacccagtagcccgacgcctgctctgggatgctgtgacactggca
cgtggaagtggcaaagccattattataacctcccacaggatggaggaatgtgatgccttc
tgtaccaggctggccatcatggtgaggggaaagttcatgtgcttgggtagccctcagcac
ctcaaaagcaagtttggcaatatttacatcctgaaggtaaaggtccagatgaatacgcaa
aagcatgaactagatgatttaaaagttttcatcacagagacattcccaggtagcgtatta
aagcaggagcaccaagggatccttaattactacattcccagcaaggacaatagctgggca
aaggtgtttggaattttggaggaagctaaaaagcgtttcaatttagaagattattctgcc
agtcagataatgctggaacaagtcttcctgagctttgccagcctacagaacacagaagat
gatcaaacatga
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