Rhinolophus ferrumequinum (greater horseshoe bat): 117019746
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Entry
117019746 CDS
T07722
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03420
Nucleotide excision repair
rfq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117019746 (ERCC4)
03460 Fanconi anemia pathway
117019746 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfq03032
]
117019746 (ERCC4)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117019746 (ERCC4)
DNA replication proteins [BR:
rfq03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117019746 (ERCC4)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117019746 (ERCC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
117019746
NCBI-ProteinID:
XP_032957750
Ensembl:
ENSRFEG00010015556
UniProt:
A0A671FL92
LinkDB
All DBs
Position
15:12574280..12601419
Genome browser
AA seq
916 aa
AA seq
DB search
MELGLSARLTAMAPLLEYERQLVLELLDTDGLVVCARGLGADRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFINQLKLEGVEHLPRRVTNEIASNSRYEVYTQGGVIFATSRILVVDFLT
DRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKHGFIKAFTDNAVAFDTGFCHVER
VMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKEL
KCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCITFLNLLESLRATEKAFGQNSGWLFLDSSTSMFVHARARVYHVPDAKMSKKGKMSEK
VEIKEEQETKKELVLESNPKWEALTEVLKEIEAENTESEALGGPGQVLICASDDRTCSQL
REYITMGAEAFLLRLYRKTFEKDSKAEEMWMKLRTEDSSKRIMKSSKRTKDPKNKGRTSI
KERTVKKRKRRLTLNQMIGHPEELEEEGDGKERCSRDVSSSPESCLEEIKHEDFDLNLSS
DAAYGILKEPLTIIHPLLGCSDPYALTRVLHELEPRYVVLYDAELTFVRQLEIYRASRTG
KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRSETNLDLVRGS
MSTGVPADTRKAGGQEQKSTQQTIVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTP
EMCVERKSISDLIGSLNNGRLYSQCISMSRYYKRPVLLIEFDPSKPFSLTARGAFHQEIS
SNDISSKLTLLTLHFPRLRVLWCPSPHATAELFEELKQNKPQPDAATAMAVTADSETLPE
SEKYNPGPQDFLLKMPGVNAKNCRSLMSHVKNIAELASLSRDKLTSILGNAANAKELYDF
LHTSYTEILSKGKGKT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggagctgggactgtcggctcgactgacggctatggcgccactgctggagtatgagcgg
cagctggtgttggagctactcgacacggacgggctggtagtgtgcgcccgcgggctcggc
gcggacaggctcctgtaccacttcctccggctgcattgccacccggcatgcctggtgctg
gtgctcaacacgcagccggccgaggaggagtattttatcaatcagctgaagctggaaggc
gtcgaacacctccctcgccgagtaacaaatgaaatcgcaagcaacagtcgctatgaggtt
tacacccaaggaggtgtgatatttgcaacaagccgaatacttgtggttgatttcttgact
gacagaataccttcagatttaattactggcatcttggtgtacagagctcacagaataatc
gagtcttgtcaagaagcattcatcttgcgcctctttcgccagaaaaacaaacatggtttt
attaaagccttcacagacaatgctgttgcctttgataccggtttttgtcatgtggaaaga
gtgatgagaaatcttttcgtcaggaagctctatctgtggccaaggttccatgtagcagta
aactcgtttttagaacagcacaaacctgaagtcgtagaaattcatgtttccatgacacct
gccatgcttgccatacagaccgctatactggacattttaaatgcatgtctaaaggaattg
aaatgccataacccatcgcttgaagttgaagatttatctttagaaaatgcaattggaaaa
ccctttgacaagacaatccgccattatctggatcctttgtggcaccagcttggagccaag
actaaatctttggttcaggatttgaagatattacgaactttgttgcagtatctctctcag
tatgattgtatcacatttcttaatcttctggaatctctgagagcaacagagaaggctttt
ggtcaaaattcaggttggctgtttcttgactccagcacctcgatgtttgtacatgctcga
gcaagggtttatcatgttccagatgccaaaatgagtaaaaaaggcaaaatgtctgaaaaa
gtggagattaaggaagagcaagaaacaaaaaaggaactggtcctggaaagcaatccaaag
tgggaagcgctgactgaagtactgaaagaaattgaggcagaaaatacagagagtgaggcc
cttggcggtccaggtcaagtacttatttgtgcaagtgacgaccgaacatgttcccagctg
agagagtatatcactatgggagcagaggccttcttgctgagactctacaggaaaaccttt
gagaaggatagcaaagctgaagaaatgtggatgaaactcagaacggaggacagctcaaag
agaattatgaaatctagcaaaagaaccaaagaccccaaaaataaaggaaggacttctatc
aaagaaaggactgtcaaaaagagaaaacgaaggttaactttaaatcagatgattgggcac
cctgaagaactggaagaagaaggggacggcaaggaaagatgttctagagacgtaagcagt
agcccagaaagctgcttagaggaaattaagcacgaggactttgatttaaacttgtcctcc
gatgccgcttatggaatcctgaaagagcccctcactatcatccacccacttctgggctgt
agtgacccctacgctctgacaagggtactccatgagctggagccgcgatacgtggttctg
tatgacgcagagctgacattcgttcgacagcttgaaatctacagagcaagtcggaccggg
aaacctctgagggtttactttcttatatatggaggttcaactgaagaacaacgctatctc
actgctttgcggaaagaaaaggaagcttttgaaaaactcatcagggaaaaggctagcatg
gttgtccctgaagaaagagaaggcagaagtgaaacaaacctagacctggtaagaggctcc
atgtctacaggtgttcctgccgacactcgtaaagcaggtggacaggaacagaaaagtacg
cagcagactatagttgtggatatgcgcgagttccgaagtgagctcccatctctgatccac
cgtcggggtattgacatcgaaccagtgaccttagaggtcggggattatattctgactcca
gaaatgtgcgtggagcgcaagagtatcagcgacctgatcggctcgttgaacaacggccgc
ctctacagccagtgtatctctatgtctcgctactacaagcgcccggtgctcctgatcgag
tttgaccccagcaagcctttctccctcactgcgcgaggtgccttccatcaggagatctcc
agcaatgacattagctccaaactcacgctcctcaccctccacttcccccggcttcgggtg
ctctggtgcccctcccctcacgccaccgccgagttgttcgaggagctgaaacaaaataag
ccgcagccggatgcagcgacagccatggctgtcacggcggattctgagaccctccccgag
tcagagaagtacaatcctggtccccaagacttcttgttaaaaatgccaggggtcaatgcc
aaaaactgtcgctccttgatgagccacgttaagaacattgcagaattagcaagcctgtcg
cgagacaagctcacaagcattctggggaacgctgcaaacgcgaaggagctctacgacttc
cttcacacctcgtataccgagattctctccaaaggaaaagggaagacatga
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