Rhinolophus ferrumequinum (greater horseshoe bat): 117020177
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Entry
117020177 CDS
T07722
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03015
mRNA surveillance pathway
rfq05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117020177 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
117020177 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117020177 (HBS1L)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117020177 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
AAA_29
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
117020177
NCBI-ProteinID:
XP_032958334
Ensembl:
ENSRFEG00010003918
UniProt:
A0A671DXU1
LinkDB
All DBs
Position
3:complement(81551325..81626764)
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AA seq
684 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPVEPVEEYDYEDL
KESSSSLLSDQLSEIDQARLYSCLDHMREVLGDAVPEDILIEAVLKNKFDVQKALALVLQ
QDKMQNLKVKSEGAVSIGKIAKGKSVDARSSRSESEIVPKVAKMTVSGKKQTMGFEVPGV
TAEENGHSFHTSQKGHLSEDTSFASSDVLETVSKSALPSHTIQASEEQSSTQTPVKKSSK
LRQQIDVRVELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESK
KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA
QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQD
ITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP
QRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQAGDRLLAMPPNETCTAKGITLHDEP
VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIRACTRFRARILIFNIEIPITKGFPV
LLHYQTVSEPAIIKRLISVLSKSTGEVTKKKPKLLTKGQNAMVELQTQRPIALELYKDFK
ELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgttcgaggctataactatgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttactcacggcgtgacaaacctgttgagcctgtagaagaatatgattatgaagatctg
aaagaatcctctagttctcttttgagtgatcagctaagtgaaattgatcaagcccgtctt
tattcgtgccttgatcacatgagggaggtacttggagatgctgtaccagaggacatattg
attgaagcagttctgaagaacaagtttgatgtgcagaaggctttggcactggttctgcaa
caagataaaatgcagaatttgaaggtcaagagtgagggagcagtatctataggaaagata
gcaaaaggaaaatcagtagatgcccggtcatctcgaagtgaatctgaaattgtgccaaaa
gttgctaaaatgactgtatctggaaaaaagcaaactatgggatttgaagtgcctggagta
actgctgaagaaaatggtcatagtttccacacatctcaaaaaggacatctgagtgaagat
accagctttgcctcctctgatgttcttgagactgtttctaaatcagctcttccatcccac
accattcaagcctcagaagagcagagttcaacacaaacaccagtgaaaaaatctagcaag
ctgaggcagcaaatagatgtgcgagtggaattggagaaacggcaaggagggaagcaactc
ctcaacttagtggtcattggtcatgttgatgctgggaaaagtaccctgatgggccatatg
ctttatcttctgggtaatgtgaacaaaagaactatgcataagtacgaacaagagtctaag
aaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaagaaagg
gaaaggggagtaacaatggatgttggtatgacaaagtttgagactacaaccaaggttatt
acattaatggatgctccaggccataaggatttcattccaaatatgattacgggagcggct
caggcagatgtagctgttttagtggtagatgccagcaggggagagtttgaagctggattt
gagactgggggacaaacacgagaacatggcctcttggttcgttctcttggagtaacacag
cttgcagttgcagtcaataaaatggatcaggttaattggcaacaagaaaggtttcaagat
attactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgatgtagct
tttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcaatcaagtgaa
cttacaaaatggtataaaggactatgtttattagaacaaattgattccttcaaacctcct
caaagatctatcgataagccttttagattatgtgtatctgatgttttcaaagatcaagga
tctggattttgtgtaactggtaaaattgaagctggttatatccaggctggtgaccgacta
ctagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgatgaacct
gtcgactgggcggcggcaggtgatcatgttagtctcacgttggttgggatggatatcatc
aaaatcaatgttggctgcatattttgtggccccaaagaacccattagagcttgcactcgt
ttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggatttcctgtg
ctgttacactaccaaactgtcagtgaacctgccattattaaacgattgattagcgttcta
agcaaaagcacgggcgaagtcaccaagaagaagcctaaattattgactaaaggccagaat
gcaatggtagagctacagacacaaagaccaatcgcacttgagctatacaaagactttaaa
gagctggggagatttatgctgcgttacagtggttctacaatagctgctggtgtagtcact
gagataaaagaatga
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