KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117020211
Entry
117020211         CDS       T07722                                 
Name
(RefSeq) ubiquitin-like
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03010  Ribosome
rfq04120  Ubiquitin mediated proteolysis
rfq04137  Mitophagy - animal
rfq04140  Autophagy - animal
rfq05012  Parkinson disease
rfq05022  Pathways of neurodegeneration - multiple diseases
rfq05167  Kaposi sarcoma-associated herpesvirus infection
rfq05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    117020211
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117020211
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117020211
   04137 Mitophagy - animal
    117020211
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    117020211
   05167 Kaposi sarcoma-associated herpesvirus infection
    117020211
  09164 Neurodegenerative disease
   05012 Parkinson disease
    117020211
   05022 Pathways of neurodegeneration - multiple diseases
    117020211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:rfq03011]
    117020211
   04121 Ubiquitin system [BR:rfq04121]
    117020211
Ribosome [BR:rfq03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    117020211
  Archaea
    117020211
Ubiquitin system [BR:rfq04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   117020211
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ribosomal_L40e Ubiquitin_2 DUF2604 OTU1_UBXL
Other DBs
NCBI-GeneID: 117020211
NCBI-ProteinID: XP_032958425
Ensembl: ENSRFEG00010004274
LinkDB
Position
3:complement(82037033..82037359)
AA seq 108 aa
MQIFVKTLTGKTITLEIEPSDTIENVKAKIQHKEGIPPDQEHLIFAGKQMEDGRTLSDYN
IQKESTLHLVLLWGGIIEPSLHQLAQKYNCDEMICRKCYVLLHLRAVN
NT seq 327 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccttgacgggcaagaccatcacacttgagatcgagcccagt
gacactatcgagaatgtcaaagctaaaatccaacacaaggagggcatcccacctgaccag
gagcatctgatttttgccggcaaacagatggaggatggccgcactctctcagactataat
atccagaaagagtccactctgcacttggtgcttctgtggggtggtatcattgagccttcc
ctccaccagcttgcccagaagtacaactgtgacgagatgatctgccgcaagtgttatgtt
ctcctgcatctccgtgctgtcaactga

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