Rhinolophus ferrumequinum (greater horseshoe bat): 117020288
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Entry
117020288 CDS
T07722
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04010
MAPK signaling pathway
rfq04022
cGMP-PKG signaling pathway
rfq05166
Human T-cell leukemia virus 1 infection
rfq05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117020288 (SRF)
04022 cGMP-PKG signaling pathway
117020288 (SRF)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117020288 (SRF)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117020288 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfq03000
]
117020288 (SRF)
Transcription factors [BR:
rfq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
117020288 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
117020288
NCBI-ProteinID:
XP_032958549
Ensembl:
ENSRFEG00010003481
LinkDB
All DBs
Position
3:12586507..12596053
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AA seq
513 aa
AA seq
DB search
MLPSQAGAAAALGRGSALGGSLNRTPTGRPAGGGGGGGGTRGANGGRVPGNGAGLGPGRF
EREAAVAATTTPAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLGDMEIGMVVSGPEA
AAAATGGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELS
TLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRM
SATGFEETDLTYQVSESDSSGETKDSLKPVFTVTNLPGTTSTIQTAPSTSTTMQVSSGPS
FPITNYLAPVSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFTLMPGGAVAQQVP
VQAIQVHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSPHAVM
YAPTSGLADGSLTVLNAFSQAPSTMQVSHSQVQEQAGGVPQVFLTAQSGTVQIPVSAVQL
HQMAVIGQQAGSSSNLTELQVVNLDTAHSTKSD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaagctggggccgcggcggcgctgggccggggctcggccttggggggc
agcctgaatcggaccccgacggggcggcccgctggtggtggcggtggcggcggcgggact
cgcggggctaacgggggccgggtccccgggaacggcgcggggctcgggcccggtcgcttc
gagcgggaggctgcagtagcagcgacaaccaccccggcgcccaccgcgggggccctctac
agcggcagcgagggcgactcggagtcgggcgaggaggaggagctgggcgcggagcggcgc
ggcctgaagcgaagcctgggcgacatggagatcggcatggtggtcagtgggcccgaggcg
gcggcagcagccaccgggggctatgggccggtgagcggcgcggtgagcggggccaagccg
ggtaagaagactcgcggccgcgtgaagatcaagatggagttcatcgacaacaagctgcgg
cgctacacgaccttcagcaagaggaagacgggcatcatgaagaaggcctatgagctgtcc
acgctgacagggacacaggtgctgttgctggtggccagtgagacaggccatgtgtatacc
tttgccacccgcaaactgcagcccatgatcaccagtgagactggcaaggccctgattcag
acctgcctcaactcgccagactctccaccccgctcagaccccaccacagaccagagaatg
agtgccacgggctttgaagagacagacctcacctaccaggtgtcggagtccgacagcagt
ggggagaccaaggactcactgaaaccggtgttcacagtcaccaacctgccgggtaccacc
tccaccatccaaaccgcgcccagcacctctaccaccatgcaagtcagcagcggtccctcc
ttccccatcaccaactacctggcgccagtgtctgctagtgtcagccccagcgctgtcagc
agtgccaacgggactgtgctgaagagtacaggaagtggccctgtctcgtctgggggcctc
atgcagctgcctaccagcttcaccctcatgcctggtggggcagtggcccagcaggtccca
gtgcaggccattcaggtgcaccaggccccacagcaagcgtctccctctcgcgacagcagc
acagacctcacgcagacctcctccagcggaacagtgacattgcctgccaccatcatgacg
tcatctgtgcccacaactgtgggcggccacatgatgtaccctagcccccatgcggtgatg
tatgcacccacctctggcttggctgatggcagcctcactgtgctcaatgccttctcccag
gcgccatccaccatgcaggtgtcccacagccaggtccaggagcaagcaggtggcgtcccc
caggtcttcctgacagcacagtctgggacagtgcagatccctgtttctgcagttcagctt
caccagatggctgtcatagggcagcaggccggaagcagcagcaacctcaccgagttacag
gtggtgaacctggacaccgcccacagcaccaagagtgactga
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