Rhinolophus ferrumequinum (greater horseshoe bat): 117020593
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Entry
117020593 CDS
T07722
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117020593 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfq01007
]
117020593 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfq03016
]
117020593 (VARS1)
Enzymes [BR:
rfq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
117020593 (VARS1)
Amino acid related enzymes [BR:
rfq01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117020593 (VARS1)
Transfer RNA biogenesis [BR:
rfq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117020593 (VARS1)
Prokaryotic type
117020593 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Val_tRNA-synt_C
tRNA-synt_1e
Arc1p_N_like
Jag_N
Motif
Other DBs
NCBI-GeneID:
117020593
NCBI-ProteinID:
XP_032959076
Ensembl:
ENSRFEG00010002616
LinkDB
All DBs
Position
3:complement(2247736..2260738)
Genome browser
AA seq
1265 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVVVQQWVSYADTELIPAACGATLPALG
LRSSVQDPQAALGALGRALSPLEEWLRLHTYLAGETPTLADLAAVTALLLPFRYVLDASA
RRIWGNVTRWFITCVQQPEFQAVLGEVVLYSGARPLSQQPGPEVTAPPKTAAQLKKEAKK
REKLEKFQQKQKMQQQQPPPGEQKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGTMPDS
YSPQYVEAAWYPWWEQQGFFKPEYGRSSLSTPNPRGVFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLNRHQLGREAFLREVWKW
KEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSTAVTEAFVRLHEEGVIYRSTRLVNWSC
SLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLISFAYKVQGSESDEEVVVATTRIE
TMLGDVAVAVHPKDPRYQHLKGKSVTHPFLSRSLPILFDDFVDMEFGTGAVKITPAHDQN
DYEVGQRHGLEAVSIMDARGALVNVPPPFLGLPRFEARKAVLVALKERGLFRGIEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDW
CISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRSEAEAREKAAKEFGVSPDKIS
LQQDEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLK
LTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEM
EKAKEGQKADFPVGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRGLGKGFVPSPTSEPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWL
YELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRV
PHAAPSLCVTPYPEPSECSWKDPAADAAMELALSITRAVRSLRADYNLIRIRPDCFLEVS
DEATGALASAVSGYVQALAGAGVVAVLALGAPVPQGCAVALASDRCSVHLQLQGLVDPAR
ELGKLQAKRGEAQRQAQRLRERRAATGYAAKVPLTVQEADEAKLQQTEAELRKMDEAISL
FQKML
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctatgtctcgcctcaccccgacgccttccccagcctccgagctctcata
gctgcgcgctacggggaggctggggagggtcccgggtggggaggggctcacccccgcatc
tgtctccagccgcctccgacgagcaggactccctttcccccaccacggctgcccgccctg
gagcaggggcccggtggtctctgggtgtggggggccacggctgtggcccagctgctgtgg
ccagcaggcctggggggccctgggggcagccgggcagccgttgtcgtccaacagtgggtc
agttacgccgacacggagttaataccagctgcctgtggggcaacgctgcctgccttggga
ctccgcagctcagtccaggacccccaggctgcactgggggccctgggacgggccctgagc
cccttggaagagtggcttcggctgcacacttacctggccggggagacccccactctggct
gacctggcggctgtcacagccttgctgctgcctttccgatatgtcctggacgcctctgcc
cgccggatctggggtaatgtcactcgctggtttatcacatgtgtccagcagccagaattc
caggccgtgctgggagaggtggttctgtactcaggggccagacctctttcccaacagcca
ggccctgaagtcactgcacccccaaagacagctgctcaactcaagaaagaggcaaagaaa
cgggagaaactagagaaattccagcagaagcagaagatgcaacagcagcagccaccccca
ggggagcagaagaaaccaaaaccagaaaaaagggagaaacgggatcctggagtcattacc
tatgacctcccaaccccacctggggaaaagaaagatgtcagtggcaccatgcctgactcc
tacagccctcagtacgtggaggcagcctggtacccttggtgggagcagcagggcttcttc
aagccagagtatggacgttccagcttgtcaacaccaaatcccaggggcgtcttcatgatg
tgcatcccaccccccaacgtgacaggctccctgcacctgggccacgcgctcaccaatgcc
atccaggactccctgacccgatggcaccgcatgcgtggggagactaccctgtggaaccct
ggctgtgaccacgcaggcattgccacccaggtggtggtggagaagaagctctggcgagag
cagggcctaaaccggcaccagctgggccgcgaggcctttctacgggaggtctggaagtgg
aaggaggaaaaaggtgaccggatttaccaccagctgaagaagctcggcagctccttagac
tgggatcgagcctgtttcaccatggaccctaaactgtcaacagctgtgacagaggccttt
gtccggctccatgaggaaggcgtcatctaccgcagtacccgccttgtcaactggtcctgc
agcctcaactcggccatctccgacatcgaggtggataagaaggagctgacgggccgcacc
ctgctcccagtgcctggctacaaggagaaggtggagtttggggtcctcatctcctttgcc
tacaaggtccaaggctcagagagcgatgaggaggtggtggtggcaacaacacggattgag
acaatgctgggagatgtggccgtagctgtgcaccccaaagatcccagataccagcacctg
aaggggaagagcgtgacccacccgttcctgtctcggagtctgcccatcctctttgatgat
tttgtggacatggagtttggcacaggtgccgtgaagatcaccccggcacatgaccagaat
gactatgaggtggggcagaggcacgggctggaggccgtcagcatcatggacgcccgaggg
gccctcgtcaacgtgcccccgccttttctgggcctgcccaggtttgaggccaggaaggcg
gtgctggtggcactgaaggagcggggactgttccgtggcatcgaggacaaccccatggtg
gtgccgctttgcaaccggtccaaggacgtggtggaacctctgctgcggccacagtggtac
gtgcgctgtggggagatggcccaggctgccagtgctgctgtgactcggggtgacctccga
atcctgcctgaggcccatcagcggacttggcatgcctggatggacaatattcgggactgg
tgcatctcccggcagctatggtggggccatcgcatcccagcctacttcatcactgtccac
gacccagccgtacctccaggggaggaccccgacgggcggtactgggtgagtgggcgcagc
gaggccgaggcccgtgagaaggcagccaaggagtttggtgtgtcccctgacaagatcagt
ctccagcaagatgaggacgttttggatacctggttctcctctggcctcttccccttctcc
atcctgggctggcccaaccagtcagaagatctgagtgtgttctacccggggacgctgctg
gagacgggccatgacatcctcttcttctgggtggccaggatggtcatgctgggcctaaaa
ctcaccggcaggctgcccttcagagaggtgtacctccatgccatcgtgcgagatgcccac
ggccggaagatgagcaagtctctgggcaatgtcattgaccccctcgatgttatccatgga
gtctccctgcagggcctccacgaccagttgctgaacagcaacctggatcccagcgagatg
gagaaggctaaagaagggcagaaggccgacttcccggtggggattcccgagtgcggtacg
gatgccctccggtttggactgtgcgcctacacgtcccagggtcgtgacatcaacctggac
gtgaaccggatactgggataccgtcacttctgcaacaagctctggaacgccactaagttt
gccctccgtggccttgggaagggtttcgtgccttcacctacctccgagcctggaggccac
gagagcctggtggaccgctggatccgcagccggctgactgaggccgtgcggctcagcaac
caaggtttccaggcctacgacttcccagctgtcaccaccgcgcagtacagcttctggctc
tacgagctctgtgatgtctacctggagtgcctgaagcccgtgctgaatggggtggaccag
gtggccgctgagtgtgcccgccagaccctctacacctgcctggatgttggcctgcggctg
ctgtcacccttcatgcccttcgtgaccgaggagctgttccagaggctgccccggcgggtg
ccacatgcagcccctagcctctgcgttaccccctacccggagccttcagagtgctcctgg
aaggaccctgcggccgacgctgccatggagctggccctgagcatcactcgggctgtgcgt
tccctgcgtgccgactacaacctcatccggatccggcccgactgtttcctggaagtgtcg
gacgaggccacaggcgccctggcttcggcagtgtcgggctacgtgcaggctctggccggc
gcaggtgtggtggctgtcctggctctgggggctcccgtaccacagggctgcgctgtggcc
ctggcttccgaccgctgctccgtccacctgcagcttcaggggctggtcgacccggcccgt
gagctgggcaagctgcaggccaagcggggtgaggcccagcggcaggcccagcgtctgcgg
gagcgccgcgccgccacgggctacgcagccaaggtgcccctcacagtccaggaggcagac
gaggccaagctccaacagacagaagcagagctcaggaagatggacgaggccatctcccta
tttcagaagatgctgtga
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