Rhinolophus ferrumequinum (greater horseshoe bat): 117020659
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Entry
117020659 CDS
T07722
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03083
Polycomb repressive complex
rfq04980
Cobalamin transport and metabolism
rfq05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117020659 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117020659 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117020659 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rfq01009
]
117020659 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfq03036
]
117020659 (HCFC1)
03029 Mitochondrial biogenesis [BR:
rfq03029
]
117020659 (HCFC1)
Protein phosphatases and associated proteins [BR:
rfq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117020659 (HCFC1)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
117020659 (HCFC1)
HMT complexes
COMPASS/SET1 complex
117020659 (HCFC1)
MLL-HCF complex
117020659 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117020659 (HCFC1)
Mitochondrial biogenesis [BR:
rfq03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117020659 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
117020659
NCBI-ProteinID:
XP_032959189
Ensembl:
ENSRFEG00010004542
LinkDB
All DBs
Position
X:6468561..6493557
Genome browser
AA seq
2096 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PTNPPKSPAPAAAAPAVQPLTQVGITLLPQAAAAPPTTTTIQVLPPVPGSSISVPAAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTMTSLPAGVRMVVPTQSAQGTVIGSN
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSTPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAASGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQDAAASLVTSTVGQQNGSVVRVCSNPPC
ETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTNTASTAMSSIGASQQRDTRHSCA
TTTTPAVVRVGVAAGALEGAQNSVKASCQTRQTSATSTTMTVMATGAPCSASPLLGPGLA
LEAGGHGTAFVQLAPASGQVRPSGPSGKDSPVAGLVSTGHQLEAHHSHNISTPSTACSSM
GAGEPGEMRGLPTHAYESSASAPVTVTALEALLGSSTTVTQVCSNPPCETHETGTTNTAT
TSNAGSAQRVCSNPPCETHETGTTHTPTTATSGGGAGQPEHGQQPPAGRPCETHQTTSTG
TTMSVSMGTLLPDSAPSHRTLESSLEGAAPPTVAPQAGASLLTPFPTQRVCSNPPCETHE
TGTTHTATTVTSNMSSNQDPPPAASDQGEVESTEGDSVNITSSSAITTTVSSTLTRAVTT
VTQSTPAPGPSVPKISSVTETTPGALTTEVPIPATITVTIANTETSDMPFSAVDILQPPE
ELQASPGPRQQLPPRQLLQPASTPLMGESADVLSASQTPELQTAVDLSSTGDPSSGQEPA
NSAVVATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAA
QAAATEEAQALAIQAVLQAAQQAVMAGTGEPMDTSEAAAAVTQAELGHLAAEGQEGQATT
IPIVLTQQELAALVQQQQQLQEAQAQQQQHHLPTEALAPADSLNDPAIEGNCLSELAGAV
PSTVALLPSTATESLAPSNTFVAPQPVVGASPAKLQAAATLTEVANGIESLGVKPDLPPP
PSKAPVKKENQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDSGTVPDYTQLKKQELQPGT
AYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKI
IEYSVYLAIQSSQAGGGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAI
IFRIAARNEKGYGPATQVRWLQETSKDNSGTKPASKRPMSSPEIKSAPKKSKADGQ
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtctcgcccgccaactcgccagcggtgctcctgcagccccgctggaag
cgagtggtgggctggtcgggtccagtaccccggccccgccacggccaccgcgccgtggcc
atcaaggagctcatcgtggtgtttggtggcggcaacgagggaatagtggacgaactgcac
gtgtacaacacggccaccaaccagtggttcatcccagccgtgagaggggacatcccccct
gggtgtgcagcctatggctttgtgtgcgatgggacccgcctgctggtgttcggtgggatg
gtcgagtatgggaaatacagcaatgacctctatgagctccaggcaagccggtgggagtgg
aagagactcaaagcaaagacgcccaaaaatgggccccctccatgtcctcggctcgggcac
agcttctcccttgtgggcaataaatgctacctgtttgggggtctggctaatgacagcgag
gaccccaagaacaacattccgaggtacctgaatgacttatacatcctggagttgcggccc
ggctccggagtggtagcctgggacattcccattacctacggcgtcctgcccccaccccgg
gagtcgcacactgccgtggtgtacacggagaaagacaacaagaagtccaagctggtcatc
tatggagggatgagtggctgccggctcggggacctgtggaccctggatattgagactctg
acatggaataagcccagtctcagcggggtggcacctcttcctcgcagcctccactcggcc
acgaccatcggcaacaaaatgtacgtgtttggtggctgggtgcctcttgtcatggatgac
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacactggcttgtctcaac
ctggataccatggcctgggagaccatcctgatggacacactggaggacaacatcccccgg
gcccgagccggccactgcgctgtagcaatcaatacccgcctatacatttggagtgggcgt
gatggctaccgaaaggcctggaacaaccaggtgtgctgtaaggacctctggtacctggaa
acagaaaagccaccgcccccggccagagtacaactggtacgagccaacaccaattccctg
gaggtgagctggggggcagtggcaactgccgacagttaccttctgcagctccagaaatac
gacattcctgccacggctgctactgccacctcccccacacccaatccagtcccatctgtg
cctaccaaccctcccaagagccctgccccggcagcagccgcacctgctgtgcagccgctg
acccaagtaggcatcacgctcctgccccaggctgctgccgcgcctccgaccaccaccacc
atccaggtgttgccaccagtgcccggcagctcgatttcagtgcccgctgccgcccggact
caaggtgtccctgctgttctcaaagtgaccggtcctcaggctacaacaggaaccccgttg
gtcaccatgagacctgccagccaggctgggaaagcccccgtcaccatgacctcccttcct
gcaggcgtgcggatggtcgtgccgactcagagtgcccagggcacggtgattggcagcaac
ccgcagatgagtggcatggctgcgttggcggctgcagcagccgccactcagaagatccct
ccttcctcggcgcccacagtgctgagcgtcccagcaggcaccaccattgtgaaaaccgtg
gccgtcacaccgggcactaccaccctcccagccacggtgaaggtggcctcctcaccagtc
atggtgagcaacccagccactcgcatgctaaagactgcagccgcccaggtgggcacgtcc
gtctcctctgctgccaacacgtccactcgccccatcatcacagtgcacaagtctgggact
gtgactgtggcccagcaagcccaggtggtgaccacagtcgtgggtggggtcaccaagacc
atcaccctggtgaagagccccatttccgtcccaggaggcagtgctctgatttccaacctg
ggcaaagtgatgtcagtggtgcaaaccaaaccagttcagacttcggcagtcacaggccag
gcatctacaggcccggtgacccagatcatccagaccaaagggcccctgccagccgggacc
atcctgaaactggtgacctcagcagatggcaagcccaccaccatcatcactaccacacag
gccagcggggctgggactaagcccaccatcctgggcatcagcagcgtgtcccctagcacc
accaagcccggcaccaccaccatcatcaagaccatccccatgtcagccatcatcacgcag
gcgggcgccacaggtgtgaccagcactcctggcatcaagtcccccatcaccattatcacc
accaaggttatgacttcgggaactggagcacctgcaaaaatcatcactgctgttcccaaa
attgccactggccatgggcagcaaggagtgacccaggtggtgctgaagggggcccctgga
cagccaggcaccatcctccgcaccgtgcccatggggggcgtccgcctggtcacccccgtc
actgtctctgctgtcaaaccagctgtcaccacgttggttgtgaagggcaccacaggtgtc
acaaccctgggtaccgtgacaggtaccgtttccaccagccttgctggagctgggggccac
agtaccagtgcttccctggccacacccatcaccaccttaggcaccattgccaccctctcg
agccaggtgatcaaccccactgccatcaccgtgtcggccgcacagaccacgctgacagcg
gccagtggtctcaccacccccaccatcaccatgcagcctgtctcccagcctacgcaggtg
actctgatcacggcgcccagtggggtggaggcccagcctgtgcacgacctccctgtgtcc
atcctggcctcacctactacggaacagcctacggccactgtcaccattgctgactctggt
cagggtgacgtgcagcctggcaccgtgacgctggtctgctccaacccgccttgtgagacc
cacgagacaggcaccaccaacacggccaccaccaccgtcgtggctaaccttggggggcac
ccgcagccgacccaagtgcagttcgtctgtgatagacaggacgcggccgcttctctcgtc
acttcgacagtggggcagcagaatggcagtgtggttcgcgtctgctccaacccaccgtgc
gagacccatgagacaggcaccaccaataccgccaccactgccacctctaacatggctggc
cagcacggctgctccaacccgccctgtgaaacccacgagacgggcaccaccaacaccgcc
tccactgccatgtcgagcattggtgccagccagcagcgagacacccggcacagctgtgcg
accaccaccacccctgctgtggtccgggtcggggtggcggcgggggccctggagggagcc
cagaattctgtcaaagcctcatgccaaacccgccagaccagtgcaaccagcaccaccatg
actgtaatggccactggggccccgtgctcagccagcccactccttgggccgggcctggcg
ttggaggccgggggccatggcaccgcttttgtgcagttggccccggcgagtggccaagtc
aggcccagcggccccagcggcaaggacagcccggtagctggcctggtgtccacggggcac
cagctggaggcacatcacagccacaacatcagcacccccagcacagcctgctctagcatg
ggtgctggggagcctggcgaaatgcgagggctccccacacatgcgtacgagagctcagcc
agcgcccctgtgactgtgacagccctggaggcgctgctgggctcctcaaccaccgtgacc
caggtctgctccaacccgccgtgcgagacccacgagacaggcaccaccaacacggccact
acctcgaatgcgggcagcgcccagcgggtctgctccaacccgccctgcgagacccacgag
acgggcaccacccatacacccaccaccgccacctccggtgggggtgcaggccagcccgag
catgggcagcagccccctgccggccgcccctgcgagacacaccagaccacttccactggc
accaccatgtcagtcagcatgggcaccctgctccccgacagtgccccctcccataggacc
ctggagtccagcttggagggggcagcaccgcccaccgtcgctccccaggcgggtgcttca
ttgctgactccttttccaacgcagagggtgtgctccaaccctccctgtgagacccacgag
accggcaccacgcacacggccactactgtcacctccaacatgagttccaaccaggatccc
ccgccggctgccagcgaccagggagaggtagagagcacggagggcgacagtgtgaacatc
accagctccagtgccatcacgaccaccgtgtcctctacgctgacgcgggccgtgactact
gtgacacagtccacaccggccccaggcccctctgtgcccaagatctcatccgtgactgag
actaccccaggggctctgaccaccgaagtccccatcccggccacgataacagtgaccata
gccaacacagaaacttctgacatgcccttctctgctgttgacatcctgcagcccccagag
gaactccaggcctcgccagggccacgccagcagctgccgccacggcaactcctgcagccc
gcctccacacccctgatgggggagtccgccgatgtcctgtcagcttcccagacccctgag
ctgcagaccgccgtggatctgagcagtacaggggacccatcgtcaggccaggagcctgcc
aactcagctgtggtggccactgtggtggtccagccacccccacccacacagtctgaagta
gaccagttgtcacttccccaagagctgatggccgaggcccaggcaggcaccaccaccctc
atggtaacagggctcacccctgaggagctggcggtgactgctgccgccgaagcagctgcc
caggccgcagccacagaggaagcccaggccctggccatccaggcagtgctccaggctgca
cagcaagccgtcatggcaggcactggggagcccatggacacatccgaggcggcggcagct
gtgacacaggcagagctgggccaccttgccgccgagggtcaggagggccaggccaccacc
atccccatcgtgctgacgcagcaggagctggccgccttggtgcagcagcagcagcagctc
caggaggcacaggcccagcagcagcagcaccacctccccaccgaggccctggcccccgct
gacagcctcaacgacccggccattgagggcaactgcctcagcgagctggccggggccgtc
cccagcaccgtggccctgctgccctccacagccactgagagcctggctccttccaacacg
tttgtggccccccagccagtcgtgggagccagtcccgcaaagctgcaggccgccgctacc
ctgactgaggtggccaatggcatcgagtccctgggcgtgaagccggacctaccgcccccg
cccagcaaagcccctgtgaagaaagagaaccagtggtttgatgtgggagtgatcaagggc
actaatgtaatggtgacacactatttcctgccaccagatgacgctgtcccgtctgatgac
gactcgggcactgtcccagactatacgcagctgaagaagcaggaactgcagcccggcaca
gcctataagtttcgtgttgccgggatcaatgcctgtggcagggggcccttcagcgagatc
tcagcttttaagacgtgtctgcctggtttcccaggggccccctgtgccattaaaatcagc
aaaagtcccgacggtgctcacctcacctgggagcccccctctgtgacctcgggcaagatc
atcgagtactcggtctacctggccatccagagctcccaggccggcggcggcgagcccaag
agctcgaccccggcccagctggccttcatgcgggtgtactgcgggcccagcccctcctgc
ctcgtgcagtcctctagcctctccaacgcccacattgactacaccacgaagcccgccatc
atcttccgcatcgctgcccgcaacgagaagggctacggcccggccacccaagtgaggtgg
ttgcaagaaaccagtaaagacaactctggcaccaagccagccagcaagcggcccatgtcc
tctccagaaataaaatccgctccaaagaaatctaaggcagatggtcagtga
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integrated database retrieval system
