Rhinolophus ferrumequinum (greater horseshoe bat): 117020788
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Entry
117020788 CDS
T07722
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04151
PI3K-Akt signaling pathway
rfq04510
Focal adhesion
rfq04512
ECM-receptor interaction
rfq04820
Cytoskeleton in muscle cells
rfq04974
Protein digestion and absorption
rfq05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117020788 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117020788 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117020788 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117020788 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
117020788 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
117020788 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rfq00535
]
117020788 (COL9A1)
Proteoglycans [BR:
rfq00535
]
Extracellular matrix (ECM) proteoglycans
Others
117020788 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
117020788
NCBI-ProteinID:
XP_032959382
Ensembl:
ENSRFEG00010009212
UniProt:
A0A671ERK1
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Position
3:complement(32255762..32347165)
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AA seq
680 aa
AA seq
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MAWTARDHGALGLRLLLSGLCLCAAQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPP
GPPGPVGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGLKGEPGVPGSRGFPGRGIPG
PPGPPGSAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRSG
YPGIPGMRGHKGPKGEIGEPGRQGHKGEEGEQGEPGEVGASGPPGAQGLRGITGIIGAKG
EKGARGLDGEPGPRGIPGAPGDQGQRGPPGEAGPKGDRGAQGPRGIPGVPGSKGDTGLPG
VDGHDGIPGIPGTKGDPGKPGPPGDAGLQGFPGVPGIPGAKGVAGEKGNTGAPGKPGQLG
NSGKPGQQGPPGEVGPPGPRGHPGSRGETGPEGAPGIPGKLGPIGNPGFNGLPGPPGLPG
MKGDRGVVGEPGPKGEQGPPGEEGEAGERGEFGDMGLQGQKGAVGNPGDPGLRGPEGGRG
LPGVEGPKGPPGPRGVQGEQGVTGLPGIEGPPGRAPTDQYIKQVCMRVLQEHLAEMAASL
KRPDTGASGLPGKPGLPGPPGPPGQNGFPGHIGLRGLPGIKGPPGALGLRGPKGDLGERG
ERGPPGRGPKGLPGAIGLPGEPGAAVFGKNGRDGERGRPGVAGIPGVPGPPGPAGPAGFC
EPAACTVHPGQRALGKGPTK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcctggaccgcgcgggaccacggagccctagggctgcgactgctgctgtcagggctc
tgcttgtgtgcggctcaacgaggtccccctggcgagcagggtcctcccgggcctcccggt
ccccctggagttccaggcatcgatggcatcgacggtgaccgaggtccaaagggtcccccg
ggacctccgggtcctgttggagaaccgggaaagccaggagctccgggcaagcctggcacg
ccaggtgctgatggattaactggacctgatggatcccctggctctgttggaccaagagga
ctaaaaggagaacctggtgtcccgggatctcgtggatttccaggccgtggtattcctgga
cctcctggtcctcctgggtcagcaggtctccctggagagcttggccgtgttggaccaatt
ggtgaccctgggagaagaggaccacctggacctcctggccccccgggacccagtggaaca
attggctttcatgatggagatccattgtgtcccaattcctgtccaccaggtcgctcagga
tatccaggcataccaggcatgaggggtcataaagggcctaaaggagaaattggtgaacct
ggaagacaagggcacaagggtgaagaaggtgaacagggagaaccaggagaagtgggagct
tcaggacctccgggagctcaaggattgagaggcatcaccggcataattggggccaaaggg
gaaaaaggtgctcggggcttagatggagaacctgggcctcgaggcatccctggtgcacct
ggtgatcaaggacagcgaggacctccaggagaagcaggtcccaagggagatagaggagct
caaggtcctagaggaattcctggcgtccctgggtccaaaggagatacgggcttgccaggt
gtggatggccatgacgggatacctggaatacctggaacaaagggtgacccagggaaacct
ggacctcctggtgatgcaggattgcaggggtttcctggtgtgcctggaattcctggtgca
aagggtgttgctggtgaaaagggtaacacaggtgctcctgggaagcctggtcaactgggg
aattcaggcaaaccgggccaacaggggccaccaggagaggttggaccaccaggaccccgg
ggacatcctggcagtagaggagaaacaggaccagaaggagccccaggcataccaggtaaa
ctgggtcctattggtaaccctggcttcaatggcttgcctggcccccctggacttcctgga
atgaaaggtgacaggggagtagtcggtgaacctggtccaaagggtgaacagggtccccct
ggtgaagaaggtgaagcaggagaaaggggtgaatttggagacatgggattacagggccaa
aagggagctgtgggcaaccctggcgatccaggcttgagggggcctgaaggaggtcggggt
cttcctggagtggaaggaccaaaaggaccgcctggaccacgaggcgtgcagggagaacag
ggtgtcaccggcctgcctggtatcgagggccctccagggagagctccaacagaccagtac
attaagcaggtttgcatgagagtcttgcaagaacatcttgctgagatggctgctagtctc
aagcgtccagacacgggagcttccggtctccctgggaaacctggactacctggtccccca
ggaccccctggacagaacggtttcccaggccacataggacttcgtggcctcccagggatt
aaaggtccccctggtgctcttggtttgaggggacctaaaggtgacttgggagaaagggga
gaacgtggccctccaggaagaggtcccaaaggtttgcccggagcgataggtctcccaggt
gagccaggtgctgccgtctttgggaagaacggccgggatggtgagcgaggccgtccaggg
gtggcaggaattcctggtgtgcccggcccccctggtcctgcgggccctgctggtttctgc
gagccagccgcctgcaccgtgcatcctggtcaacgagccttaggcaaagggccaactaag
tga
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