Rhinolophus ferrumequinum (greater horseshoe bat): 117021226
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Entry
117021226 CDS
T07722
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfq03009
]
117021226
03036 Chromosome and associated proteins [BR:
rfq03036
]
117021226
Enzymes [BR:
rfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117021226
Ribosome biogenesis [BR:
rfq03009
]
Eukaryotic type
Pre-60S particles
Helicases
117021226
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117021226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GUCT
Helicase_C
DD_DDX21-DDX50
Motif
Other DBs
NCBI-GeneID:
117021226
NCBI-ProteinID:
XP_032959935
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All DBs
Position
4:95482737..95508343
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AA seq
579 aa
AA seq
DB search
MTHRQERMQLDMLDKGMVHVLGGTELDNLYTAGGVTAKGEAALVLEDGFKDEGDMVPDSK
EFTLLDVNKSKAKGIKAELQSSAVSAPTGRLAKTLCAALSDTLRNDPPGRSSGRSDRALC
EEEAIIFWDPPKLFLARPAGLRPVMGPVVGPSPPRLTLGLVHAYKKDSEDNPQTLLFCAT
CPLWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKRRWTQRAAVMGDVIRVYSGF
QGRSTIICETKKEAQDLSQNVSIQQDAQSLHGDMPQKPREITLKGFRNGDFGVLVVTNVA
ARGLDRPEVDLVIPSSPPKDVESYIHRSGRTGRAGRSGICICFYQHEEVERKAGVKFKQI
SVPSATEIITASSKDATRLLHSVPPTVISHVKQSAEKLIEXGAMEALAAALAHISGATSV
DQRSLINADTGFGTMILGCSTEMPNISYAWKELMEQQGEDIDSKVKGMVFLKGKQGVCFD
VPTAAIIEIQGKXHNSRCWQLSVATEQPELEGPQQSHRSFRGQRDSNRGFRGQRGGNRSF
RGQREGNRNLRRKRSGGGNRSNTFQNKSQKRSFCKVFGQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgactcatcggcaggagcgtatgcagctggatatgctggacaaagggatggttcacgtc
ctgggcgggactgagctggataacttgtacacagctggcggcgtgactgctaaaggagag
gccgcactggtcctggaggatggattcaaggatgaaggagacatggtccctgattccaag
gagtttaccctcttggacgtaaacaagtccaaggcaaaggggataaaagcagaactccag
agcagtgccgtgagtgctccgactgggcgcttggctaagaccctctgcgcggctctgagc
gacacactccgcaacgatcctccgggtcgttcatctgggcgttccgacagagccctctgc
gaggaggaagccataatattttgggaccctccgaagctcttccttgcaagaccagccggc
ctcagacccgtcatgggcccagtcgtgggaccttctccacctcgattgactctgggcctt
gtccatgcatacaagaaagattcagaggacaatccccaaacattgcttttttgtgcaact
tgccctctttgggtttataatgttgctaagaaatacatgaaatctacatatgaacaggtg
gacctaattgggaaaaagactcagaaaacggcaatcactgtggagcatctggctatcaag
cgccgttggactcaaagagcagcagttatgggggacgtgatccgagtgtacagtggtttt
caagggcgctcaactattatctgtgaaaccaagaaagaagcccaggacttgtctcagaat
gtgtccatacagcaggatgcccagtcattacacggagacatgccacagaagccacgggaa
atcaccctgaaaggcttcagaaatggtgattttggagttttggtagtaaccaacgttgct
gcgcgtgggttagacaggcctgaagtggacctggttataccaagctctcctccaaaggat
gtggagtcctacattcatcgttctgggcgaacgggcagagctggaaggtcagggatttgc
atctgcttttatcagcacgaggaagtggagcgaaaggcgggagttaaatttaaacaaata
agtgtcccttctgcaacagagataataacagcttccagcaaagatgcgaccaggcttttg
cattctgtgcctcccactgtcattagtcacgtgaaacagtcagctgagaaactgatagag
naaggggccatggaagccctggcagcagcactggcccatatttcaggggccacatcagta
gaccagcgctccttgatcaacgcagatacgggctttgggaccatgatcttggggtgttca
actgaaatgcccaacattagttatgcttggaaagaacttatggagcaacagggtgaggat
atcgattccaaagtgaagggaatggtctttctcaaaggaaagcagggtgtttgctttgac
gtccctaccgcagcaataatagaaatacagggaaaatgacacaattcacggtgttggcag
ctctctgtggccacggagcaaccagagctggaaggaccacagcaaagccaccgaagcttc
agaggacagcgggacagcaatcgaggttttaggggccagcggggaggaaacagaagcttc
aggggacagcgggaaggaaatagaaacctcagaagaaagcgatcaggaggtggcaacaga
agtaacacattccaaaacaaaagccagaagcggagtttctgtaaagtatttggtcagtaa
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