Rhinolophus ferrumequinum (greater horseshoe bat): 117021292
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Entry
117021292 CDS
T07722
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117021292 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117021292 (LSM1)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117021292 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
117021292 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117021292
NCBI-ProteinID:
XP_032960106
Ensembl:
ENSRFEG00010002086
UniProt:
A0A671DU01
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All DBs
Position
4:61428820..61437752
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AA seq
133 aa
AA seq
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MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKLEAEKLKVQALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgccaggcaccgccagcctcatcgaggacatcgacaaaaagcacttggtc
cttcttcgagatggaaggacgcttataggctttttgagaagcattgatcagtttgctaat
ttagtgctacatcagactgtggaacgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagacttggaa
aaggagagtgacacaccccttcaacaagtatctattgaagaaattctagaagaacaaagg
gtagaacagcaggccaagctggaagccgagaagctgaaagttcaggctcttaaggatcga
ggtctctccattcctcgcgcagatactcttgacgagtattaa
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