Rhinolophus ferrumequinum (greater horseshoe bat): 117021508
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Entry
117021508 CDS
T07722
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117021508 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfq03036
]
117021508 (PDS5B)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117021508 (PDS5B)
Chromosome and associated proteins [BR:
rfq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
117021508 (PDS5B)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
117021508 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
117021508
NCBI-ProteinID:
XP_032960612
Ensembl:
ENSRFEG00010002968
LinkDB
All DBs
Position
4:complement(96371423..96533481)
Genome browser
AA seq
1450 aa
AA seq
DB search
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEACVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDTKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLVRSELEKPRSRKKTPAPDSEEKLGMDDLTKLVQEQKPKGSQRGRKRGHTASESE
EQQWPEEKRLKEDVLENEDEQNSPPKKGKRGRPPKPLGGGGAPKEEPPMKPSKKGSKKKS
GPSVAEEEEEEERQSGNTEQKSKSKQHRPSRRAQQSRAESPETSAVEPTQSIPQKGRGRP
SKTPSPSQPKKNVRVGRSKQAATKENDSSEEVDVFQGSSPVNDDIPQEETEEEEVSTVNV
RRRSSKRERR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacaaggaccaatgatggaaaaattacttatcctcctggtgtcaag
gaaatctcagataaaatatctaaagaggagatggtgagacggttaaagatggttgtgaaa
actttcatggatatggaccaggactcggaagaagaaaaggagctttatttaaacctagct
ttacatcttgcttcagactttttcctcaagcatcccgataaagatgtccgcttactggta
gcctgctgccttgctgatattttcaggatttatgctcctgaagctccttacacatcccct
gataaactaaaggatatatttatgtttataacaaggcagttgaaagggctagaggataca
aagagcccacaattcaataggtatttttatttacttgagaacattgcttgggtcaagtcc
tataacatatgctttgagttggaagatagcaatgaaatttttacacaactatacagaaca
ttattttcagttataaacaatggccacaatcagaaagttcatatgcacatggtagacctc
atgagttctattatttgtgaaggtgatacagtatctcaggagcttttggatacagttttg
gtaaatctggtacctgcccataaaaacttaaacaagcaagcgtacgatttggcaaaggct
ttactgaagaggaccgctcaagctattgaaccgtacattaccaatttttttaatcaggtt
ttgatgcttgggaaaacatctatcagcgatttgtcagagcatgtctttgacttaattttg
gaactctataatattgatagtcatttgctgctctcagttttaccccagcttgaatttaaa
ttaaagagcaatgataatgaggaacgcctgcaagttgttaaactactggcaaaaatgttt
ggggcgaaggattcagaattggcttctcaaaacaaaccactttggcagtgttacttgggc
aggttcaacgacatccatgtaccaatacgtctggaatgtgtgaaatttgctagccactgt
ctcatgaaccatccagatttagcaaaggacttaacagagtatcttaaagtgaggtcacat
gaccctgaggaagctattagacatgatgttattgtgtctatagttacagctgctaaaaag
gatattcttctggtgaacgatcacttgcttaattttgtgagagagagaacattagataaa
cggtggagagtgcgcaaagaagccatgatgggacttgcccaaatttataagaaatatgct
ttacaatcagcagctggaaaagatgctgcaaaacagatttcatggatcaaagacaaattg
ctacatatatattatcaaaatagtattgatgatcgattgcttgttgagaggatctttgct
cagtacatggttccccataatttggaaactacggaacggatgaagtgcttgtattacttg
tatgccacactggatttaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctccgacaccaagtaaaggatttgcttgacttaattaagcaacccaaaacagatgcc
agtgtcaaggccatattttcaaaagtgatggttattacaagaaatttgccagatcctggt
aaggctcaggatttcatgaagaaattcacacaggtgctagaagatgatgagaaaataaga
aaacagttagaagtactcgttagtccaacatgctcctgcaagcaggctgaagcttgtgtg
cgtgaaataactaagaagttgggcaaccccaaacagcctacaaatccattcctggaaatg
atcaagtttctcttggaaaggatagcacctgtacacatagatactgaatctatcagtgcc
cttattaagcaagtgaacaaatctatcgatggaacagcagatgatgaagatgagggagtc
ccaactgatcaagccatcagggcaggccttgaactgcttaaagtactctcatttacacat
cccatctcatttcattctgctgagacatttgaatctctcctggcttgtctgaaaatggat
gatgaaaaagtagcagaggctgcactccaaattttcaaaaacacaggaagcaaaattgaa
gaggatttcccacacatcagatcagctttgcttcctgttttacatcacaaatctaaaaaa
ggaccccctcgtcaagccaaatatgctattcattgtatccatgcaatattttctagtaaa
gagacccagtttgcacagatatttgagcctctgcataagagcctagatccgagcaacctg
gagcatctcataaccccgctggtcaccattggtcacattgccctccttgctcctgatcag
tttgctgctcctttgaagtctttggtagctactttcattgtgaaagaccttctcatgaat
gatcggcttccaggaaaaaagacaactaagctttgggttccagatgaagaagtttctccc
gagacaatggtcaaaattcaggctattaaaatgatggttcgatggctacttggaatgaag
aataatcacagtaaatcaggaacttctaccttacgattactaacaacaatattgcatagt
gatggagacttgacagaacaggggaaaattagtaaaccagacatgtcacgcctgcggctc
gctgctgggagtgctattgtgaagctggcgcaggaaccgtgctaccatgaaatcatcacg
ttggaacagtaccagctgtgcgcgttagcgatcaatgatgagtgctaccaagtaagacaa
gtatttgctcagaaacttcacaaaggcctttcccgattgcggcttcccctcgaatacatg
gcaatctgtgcactctgtgccaaagaccctgtgaaagagagaagagctcacgccaggcag
tgtctggtaaaaaacataaacgtgcgacgcgagtatctgaagcagcacgcagctgttagt
gaaaaactattgtctcttctaccagagtatgttgttccatatacaattcaccttttggca
catgacccagattatgtcaaagtacaggatattgaacaacttaaagatgttaaagaatgt
ctgtggttcgttttagaaatattaatggctaaaaatgaaaataacagccatgcatttatc
agaaagatggtagaaaatattaaacaaacaaaggatgcccaaggaccagatgacacaaaa
atgaatgaaaaactgtatactgtgtgtgatgttgccatgaacatcatcatgtccaagagc
accacgtacagtttggaatctcctaaagacccagtcctgccagctcgttttttcacccag
cctgacaagaacttcagtaacaccaaaaattacctgcctccagaaatgaaatcatttttc
actcctggaaaacctaaaacaaccaatgttctgggagcggttaataagccgctctcgtca
gcaggcaaacagtcccagacaaagtcgtccaggatggaaacggtcagcaatgccagcagc
agctcaaacccaagctctccgggaagaataaaggggaggcttgatagttctgaaatggat
cacagtgaaaatgaagattacacaatgtcttcacctttgccgggaaaaaaaagtgacaag
agagacgactctgaccttgtaaggtctgaattggagaaacctagaagccggaaaaagaca
cctgccccagattcggaagagaaattaggtatggatgacctgactaagttggtccaggaa
cagaaacctaaaggcagtcaacgtggacggaaaagaggccatacagcttccgagtcagag
gaacagcagtggcctgaggaaaagaggctcaaagaagatgtgttagaaaatgaggatgaa
cagaatagtccaccaaaaaaaggtaaaagaggccgaccaccgaaacctcttggtggtggg
ggtgcaccaaaagaagagccaccaatgaaaccttctaaaaaaggaagcaaaaaaaaatct
ggaccttcagtagctgaagaagaggaagaagaagagagacaaagtggaaacacagaacag
aagtccaaaagtaaacagcaccgaccatcacggagggcacagcagagcagagcagagtct
cctgaaactagtgcagttgagcccacacagtccatcccacagaaaggacgaggaagacca
tcaaaaacgccatcaccatcacaaccaaaaaaaaatgtccgtgtaggacgctccaaacaa
gcagctactaaagaaaatgattcaagtgaagaagtagatgtgtttcagggtagctcccct
gtcaatgatgatattccacaggaagaaacagaagaggaggaagtttctacagtaaatgta
cggcggcgaagttctaaaagagagaggcgatga
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