Rhinolophus ferrumequinum (greater horseshoe bat): 117021653
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Entry
117021653 CDS
T07722
Symbol
GPC6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rfq00535
]
117021653 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rfq00537
]
117021653 (GPC6)
Proteoglycans [BR:
rfq00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117021653 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rfq00537
]
Others
117021653 (GPC6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
117021653
NCBI-ProteinID:
XP_032960779
Ensembl:
ENSRFEG00010004685
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Position
4:40080600..41108651
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AA seq
565 aa
AA seq
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MSSWIGAVILPLSGLLLSLPAGADVKARSCGEVRQAYGAKGFSLADIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCPYCRGLPSVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARSAPENF
NTRFRPYNPEERPTTAAGTSLDRLRIVWRTMQHSVTDIKEKLKLSKKVWSALPYTICKDE
SVTAGTSNEEECWNGHSKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVM
TNKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREVDSS
AAQLGYSLLSASLICIVLVLQRLCR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttggatcggggctgtgattcttcccctctccgggctgctgctgtcactccca
gccggggcggatgtgaaggctcggagctgcggcgaggtccgccaggcgtacggtgccaag
ggattcagcctggcggacatcccctatcaggagatcgcaggggaacacttaagaatctgt
cctcaagaatatacatgctgcaccacagaaatggaagacaaattaagccagcaaagcaaa
ctcgagtttgaaaaccttgtggaagagacgagtcattttgtgcgcaccacgttcgtgtcc
aggcacaagaaattcgacgaatttttccgagagctcttggagaatgcagaaaagtcacta
aatgatatgtttgtacggacctatgggatgctgtacatgcagaattcagaagtgttccag
gatctcttcacagagctgaaaagatattatactggaggcaatgtgaatttggaggaaatg
ctcaatgacttctgggctcggctcctggagcggatgtttcagctgataaacccgcagtat
cactttagcgaggattacttggaatgtgtgagcaaatacacagaccaactgaagccattt
ggagatgtaccccggaaattgaaaattcaggtcacccgcgccttcattgctgccaggaca
tttgtccaagggctgacggtgggcagagaagttgcaaaccgagtttccaaggtcagcccg
accccagggtgcatccgtgctctcatgaagatgctgtactgcccatattgtcgaggactt
ccctccgtaaggccttgcaacaactactgcctcaacgttatgaagggctgtctggcaaat
caggccgatctggacaccgagtggaatctgtttatagatgcaatgctcttggtggcagaa
cgactggaaggaccattcaacattgagtcggtcatggaccctatagatgtcaagatatct
gaagctattatgaacatgcaagaaaacagcatgcaggtgtctgcaaaggtgtttcaggga
tgtggtcaacccaaacctgctccagccctcagatctgcccgctcagctcctgaaaatttt
aatacacggttcaggccttacaatcctgaggaaagaccaacaaccgctgcaggcacgagc
ttggaccggctgaggattgtgtggagaacaatgcaacatagtgtcacagacataaaagag
aagctgaagctctctaaaaaggtctggtcggcgttgccctacaccatctgcaaggatgag
agcgtgacagcaggcacgtccaatgaagaggaatgctggaacgggcacagcaaagccagg
tacttgcctgaaattatgaatgatggactgaccaaccagatcaacaaccctgaggtggat
gtggacatcactcggcccgacactttcatcaggcagcagatcatggctctccgtgtaatg
accaacaaactaaaaaatgcatacaatggcaatgatgtcaactttcaggacacaagtgat
gaatctagtggctcagggagtggcagtgggtgcatggatgacgtgtgtcccacggagttt
gagtttgtcaccacagaggcccctgcagttgatcccgaccggagagaagtagactcttct
gcagcccagctcggctactccctgctctcagcatctctcatctgtattgtcctggtactg
cagagactgtgcagataa
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