Rhinolophus ferrumequinum (greater horseshoe bat): 117021788
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Entry
117021788 CDS
T07722
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04151
PI3K-Akt signaling pathway
rfq04382
Cornified envelope formation
rfq04510
Focal adhesion
rfq04512
ECM-receptor interaction
rfq04820
Cytoskeleton in muscle cells
rfq04926
Relaxin signaling pathway
rfq04933
AGE-RAGE signaling pathway in diabetic complications
rfq04974
Protein digestion and absorption
rfq05146
Amoebiasis
rfq05165
Human papillomavirus infection
rfq05200
Pathways in cancer
rfq05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117021788 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117021788 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117021788 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117021788 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
117021788 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
117021788 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
117021788 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117021788 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
117021788 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117021788 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
117021788 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
117021788 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfq04147
]
117021788 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
rfq00536
]
117021788 (COL4A2)
Exosome [BR:
rfq04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117021788 (COL4A2)
Glycosaminoglycan binding proteins [BR:
rfq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117021788 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117021788
NCBI-ProteinID:
XP_032961045
Ensembl:
ENSRFEG00010008798
UniProt:
A0A671EMP2
LinkDB
All DBs
Position
4:53562815..53744730
Genome browser
AA seq
1711 aa
AA seq
DB search
MDRDQCAASSPALRRWLLLGTVTVGLLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGAPGITGSKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTRGDVGQQGPSGPGGFPGSPGPLGPKGQKGEPYALSSKDRD
KYRGEPGEPGLGGYQGPPGRPGPMGPMGPVGTPGRPGPPGPPGSKGQPGNRGLGFYGEKG
EKGEMGLPGPNGIPSDNHHAIIGPTKETFHPDQYKGEKGNIGEKGKIGISLKGEEGIMGF
SGPRGTTGFDGEKGFPGQKGSRGPDGYQGHFGPQGPKGEMGDRGPPGPPAYSPHPSLAKG
GRGDPGFPGAHGEPGPRGEQGDLGPQGPPGTSIRDEDGKRGFPGEMGPKGFMGDPGIPAR
YPGPPGADGKPGHQGLPGPAGPPGPDGYLFGLKGKEGEPGFPGSSGFPGARGQKGWKGDD
GDCKCAGDQLTGVLPGLPGPKGFPGINGEPGKKGSQGDPGQHGIPGFPGFKGAPGGVGLP
GPKGMKGDSRTITTKGERGQPGVPGVPGLKGDDGIHGRDGLDGFPGLPGPPGDGIKGPPG
DPGYQGLPGTKGIPGERGPPGLGLPGPKGEPGFPGDAGLPGSPGFPGPPGPPGIPGQIDC
DTDVKRPIGGDGQEVIQPGCVGGPKGLPGQPGTPGPRGAKGLRGMPGLSGADGPPGLKGL
PGDPGREGFPGPPGFVGPRGSKGTVGLPGPDGLPGPSGPPGPVGLPGDRGLPGEVLGAQP
GPRGDAGLPGHPGLKGLPGDRGPPGFRGSQGMPGMPGLKGHPGFPGPSGHPGLPGPPGQH
GFPGGPGQEGPLGLPGALGHGGLPGDRGDPGDTGVPGPVGMKGVSGDRGDPGLLGERGHP
GNPGFKGMAGMAGVPGPKGSRGSPGMDGFQGMLGPKGRPGFPGNKGEPGFFGIPGLKGLA
GEPGVKGNRGDPGPPGPPPIILPEMKDIKGEKGDEGPMGLKGYLGIKGITGMPGIPGLSG
VPGLPGRPGHIKGVKGDIGVPGVPGLPGFPGLPGSPGITGFPGFVGSRGDKGAPGTAGLY
GEIGPTGDFGDIGDTIDLPGSPGLKGEQGITGIPGIKGFFGEKGTEGDIGFPGITGITGV
QGSPGLQGQTGFPGLTGLRGPQGEPGRVGVPGKKGDYGWPGSPGLPGFPGSRGIGGLHGL
PGTKGFPGSPGADIHGDPGFPGPAGERGDPGEANTLPGPSGAPGQKGERGAPGERGSVGS
PGLQGFPGITPPSNISGSPGDKGAPGIFGLEGYRGPPGPPGPAALPGSKGEEGNPGAPGN
PGTKGWGGDPGPQGRPGVFGLPGEKGPRGEQGFMGNTGTTGSVGDRGPKGPKGDRGFPGT
PGPLGSPGITGIPQKIAVQPGPVGPQGRRGPPGAQGEMGPQGAPGEPGFRGAPGKAGPQG
RGGVSAIPGFRGDQGPMGHQGPIGQEGEPGRPGTPGLPGMPGRSVSIGYLLVKHSQTDQE
PMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRN
DKSYWLSTTAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPVGWRSLWI
GYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYFANKYSFWLTTIPE
QSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggatagagaccagtgcgcggcgtctagccctgccctgcggcggtggctgcttctgggg
actgtgacagtgggactcctggcccaaagcgtcctggcgggcgtgaagaagtttgatgtg
ccctgtggagggagagactgcagcgggggctgccagtgctaccctgagaaaggaggacgg
ggtcagccagggccagtgggcccccagggatacaccgggcccccagggttacaaggattc
ccaggactgcagggccgcaaaggtgacaaaggtgaaaggggcgctcctgggatcacagga
tcaaaaggagacgtgggagcaagaggcgtttctggattccctggtgccgatggaattccc
ggacatcctgggcaaggtggacccagaggaccgcctggctatgatggctgcaatgggacc
aggggagacgtaggccagcagggaccctccggccccgggggcttccctggatctcctggg
cccctaggacccaaagggcagaaaggcgaaccttatgctctatctagtaaggaccgcgac
aaatacaggggtgaaccaggagagcctggattgggcggttaccaggggcctcccggccgc
cctgggcctatgggaccgatgggtcccgttggaactccaggaagaccaggaccgcctgga
ccccctggatcaaaaggacagccaggcaacagaggccttggtttttatggagaaaaaggt
gaaaagggtgaaatgggactgccaggacccaatgggattccatcagacaaccatcatgcc
atcatcgggcccacaaaggaaacattccatccagatcaatataagggtgaaaaaggaaat
ataggagaaaaagggaaaataggcatttccttgaagggagaagaaggaatcatgggcttt
tcaggaccacggggcaccactggctttgatggtgaaaaaggttttccaggacaaaaagga
agcagaggacctgatggttatcaaggccattttggaccccaaggacccaagggagaaatg
ggggaccgaggcccccctggcccacctgcctactcccctcatccttctctggcaaaaggt
ggcagaggtgacccaggattcccaggggcccatggcgagccaggaccccggggtgagcaa
ggcgatctcggcccacaaggcccccctggcacgtccatcagagatgaagatgggaagaga
ggcttcccgggtgaaatgggacccaaaggtttcatgggagacccgggcatccctgcacgg
taccccggcccaccaggagctgatggaaagccagggcaccaaggactcccagggcccgcc
ggaccacctgggccagatggttaccttttcggccttaaaggaaaagaaggagagccgggc
tttcctgggtcttctggtttccctggggctcgtggacagaaaggatggaaaggtgatgat
ggggactgtaaatgcgcaggtgatcagttgaccggggttcttccgggcctgccaggaccc
aagggctttccgggcatcaatggggagccggggaagaaagggagccaaggagaccctggc
cagcatggcatccccgggttcccagggttcaagggagcccctggtggtgttggacttcct
ggacccaaaggaatgaagggagattctaggacaattaccaccaaaggtgagaggggacaa
ccgggtgtcccaggtgtgccgggtctgaaaggtgacgacggcatccacggacgtgatggg
cttgatggattcccaggccttccgggccctcctggtgacggcatcaaagggcccccaggt
gacccaggttaccaaggactacctggcactaagggcattccaggagaaaggggtcccccg
ggattgggcctgccgggccccaaaggcgagcctggttttcccggagatgctggattacct
ggatcaccaggcttccccggtcctcctggtcccccaggcattccaggacaaatagattgt
gatacagatgtgaaaaggcccattggaggtgacggacaggaggtcatccagccaggttgt
gttggagggcctaagggattgccaggccagccaggaaccccaggccccagaggtgccaaa
ggcctcagagggatgccaggattatcaggagctgatggaccacccggactcaagggtctc
ccaggagatccaggtcgtgaagggttcccagggcccccagggttcgtggggccccgagga
tccaaaggcacagtcggcctgcctggcccagatgggctcccgggtcccagtggcccacca
gggccagtcgggcttccaggggacaggggccttcctggtgaagtcttgggagcccagccc
ggtccccggggagatgctggattgcctggacaccccgggctaaagggccttccaggagac
agaggtccacctggattcagaggaagccaggggatgccaggaatgccaggcctgaagggt
cacccaggcttcccaggaccttcaggacatccaggactgcccgggccacctggccagcat
ggcttccccggaggtcctggccaggaagggcccttggggctgccaggtgccttaggccat
ggaggtctgcctggagatagaggggacccaggtgacaccggtgtccctggccctgtgggc
atgaagggtgtctctggtgatagaggtgaccctggtttgttgggtgaaagaggtcatcca
ggaaaccctggatttaaaggaatggccggaatggctggtgtccctggaccaaaagggagt
cgaggttcacccgggatggatggtttccaaggcatgcttggacccaaaggaagacccggg
tttccgggaaacaaaggagagcccggatttttcggaattccagggctgaagggtctggct
ggtgagccaggggtgaaaggaaaccgaggagaccccggccccccaggccctcctcccatc
atcctgccagaaatgaaagacattaaaggggagaaaggagatgaaggacctatgggattg
aagggatacctgggcataaaaggtatcacaggaatgccagggatcccgggactgtcgggc
gtccctgggttgcccgggagacccggccacatcaaaggagtcaaaggagacatcggtgtt
cccggcgtgcctggtttgccaggattccctggtttgcctggctcccctggaattacagga
tttccaggtttcgtaggaagtaggggtgacaagggtgctccagggacagcaggtctttac
ggcgagatcggccccacgggtgattttggtgatattggagacactatagatttaccggga
agcccgggcctgaaaggggaacagggcatcactggaataccaggtataaaaggattcttt
ggagagaaaggaacagagggtgacatcggcttccctggaataacaggcataacaggagtc
caaggctctcctggacttcaagggcaaacaggctttccaggactgacaggcctgcggggt
cctcagggagagccaggccgggtcggagtaccaggcaagaaaggagattacggctggcca
ggcagtccgggcctaccaggttttccgggcagccgaggcatcggtggattacacggcttg
ccaggcaccaaaggctttccaggatccccaggtgcagacatccatggagacccaggtttc
ccaggtcctgctggggagaggggtgacccaggagaagccaacactcttcccggcccttcc
ggagctccaggacaaaaaggggagcgaggagccccaggggaacgaggctcagtcgggagt
ccaggacttcaggggtttccaggcatcacacccccttccaacatctctgggtcacctggt
gacaaaggggccccgggaatatttggcctggaaggttatcgaggccccccaggcccacct
gggcctgctgctctccctggaagcaaaggagaagaggggaacccaggagctccgggaaac
ccagggaccaaaggatggggtggggaccccgggccccagggccggcctggagtgtttggt
ctcccaggagaaaaagggcccagaggtgagcaaggattcatgggaaacacaggaaccacc
gggagtgtgggcgaccgaggtccgaagggacccaaaggagaccgaggattcccaggtacc
cctggtcctttgggatctccggggattacaggaatcccccagaagattgctgtccagcca
gggcctgtgggtccacagggaaggagaggccccccaggggcacagggagagatggggccc
cagggcgccccaggagaaccaggtttccgcggggctccagggaaagcagggccccaggga
agaggtggtgtgtctgctattcccggattccgaggagaccagggacccatgggacatcag
gggccaattggccaggaaggggagccaggccgcccggggacccccggcctgcccggcatg
cccggccgcagcgtcagcatcggctacctcctggtgaagcacagccagacggaccaggag
ccaatgtgccccgtgggcatgaacaagctctggagtggatacagcctgctgtactttgag
ggccaggagaaagcccacaaccaggacctggggctggcgggctcctgcctggctcggttc
agcaccatgcctttcctgtactgcaaccctggtgacatctgctactacgccagccggaat
gacaagtcctactggctgtccaccactgctcctctgcccatgatgcctgtggcagaggaa
gaaatcaagccctacatcagccgctgctctgtgtgcgaggccccagctgtggccatagcg
gtccacagtcaagacgtctctatcccccactgcccagttggatggcggagtttgtggatc
ggatattccttcctcatgcacacggccgcaggtgatgaaggtggcggccagtcgctggtg
tcgccgggcagctgtctggaggacttccgcgccacacctttcattgagtgcaatggaggc
cgggggacctgccactactttgccaataagtacagcttctggctcaccaccatccctgag
cagagcttccaaggctcgccctctgccgacacgctcaaggccgggctcatccggacgcac
atcagccgctgccaggtgtgcatgaagaacctgtga
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integrated database retrieval system
