Rhinolophus ferrumequinum (greater horseshoe bat): 117021811
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Entry
117021811 CDS
T07722
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rfq04515
]
117021811
Cell adhesion molecules [BR:
rfq04515
]
Cadherins
Protocadherins
117021811
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
117021811
NCBI-ProteinID:
XP_032961094
Ensembl:
ENSRFEG00010000264
LinkDB
All DBs
Position
4:complement(9249327..9255121)
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AA seq
1070 aa
AA seq
DB search
MSPVRRRGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPHFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQASYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLA
APGAPAASPFAAAAAAAALGGADATSATGPGTPEAGAISLVPEGAARESLVALVSTSDRD
SGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTV
RPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGSYLATVAARDPDLGRNGQVTYRLLEAE
VGRSGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQAGDGGSPQLSSSALVQVRVL
DQNDHAPVLVHPAPANGSLEVAVPGRTSRDTAVARVQARDADEGANGELAFDLLQQEPRE
AFAIGRRTGEIVLTGDLSQEPPGRVFRALLVITDGGRPPLSTTATVSFVVTAGGGRGPVA
PASAGSPERSRPPGSRLAASRPGLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKE
VRKGGPRREERPGAAGGGASAPGSPEEAARGAGPRPNMFDVLTFPGSGKAPFGSPAADAP
PPAVAAAEVPGSEGGSATGESSCHFEGQQRLRGAHAEPYGASPGFRKEPAPPVAVWKGHS
FNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGH
SDRCWSPSCGGPNTHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEK
VLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSSPGRYLSPKKEANENV
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagtgaggcgcaggggcagcccttgccttttccccttgcagctcttcagcctc
tgctgggtgctgtcagtggcccagagcaagacagtgcgatacagcaccttcgaggaggac
gcccccggcacagtcatcgggaccctagctgaggacctgcatatgaaagtatccggagac
acaagcttccgcctgatgaagcagttcaacagctcgctgctccgggtacgcgagggcgac
gggcagctgaccgtcggggacgcgggcctggaccgagagcggctgtgtgggcaggcccca
cagtgcgtgctggccttcgacgtggtcagcttctcgcaggagcagttccggctagtgcac
gtggaggtagaggtgagggacgtcaacgaccacgcgccgcacttcccgcgggcccagatc
ccggtggaggtgtccgagggcgcggccgtaggcacgcgcatccccctggaggtgccggtg
gacgaggacgtgggcgccaacgggctgcagagtgtgcgcctggccgagccgcacagcccc
ttccgcgtagagctgcagacgcgcgcagacggcgcccagtgcgctgacctggtgctgctg
caggagctggaccgcgagagccaggcctcctacagcctagagctggtggcccaggacggc
ggccgcccgccgcgctctgccacagccgctctcagcgtgcgcgtgcttgacgccaacgac
cacagcccggccttcccgcagggcgcggtggcggaggtggagctggctgaggacgcgccc
gtgggctcgctgctgctcgatctggacgccgccgaccccgacgagggccccaatggcgac
gtggtgttcgcctttggcgcccgcaccccgccagaggcgcgccgcctcttccgtctcgac
ccgcgttcgggccgcctcaccctggccggacccgtggactacgagcgtcaggacacctac
gagctggacgtgcgggcgcaggaccgtggccctgggccccgcgccgccacctgcaaggtc
atcgtgcgcatccgagacgtcaatgacaacgcgccggacatcgccatcaccccactagct
gccccgggcgcgcctgccgcctcgcccttcgccgctgccgctgccgccgctgctctcggt
ggggcggacgcgacctcggcgaccgggcccgggacgccagaggctggtgccatctctctg
gtaccagagggggcggcgcgagagagcttggtggctctcgtcagcacctcggacagggac
tccggcgccaatgggcaggtgcgctgcgccctctacgggcacgagcatttccggctgcag
ccggcctacgccggcagctacctggtggtgactgccgcatccttggaccgcgagcgcatc
gccgagtacaacctgaccctggtggccgaggaccgcggtgcgcccccgctacgcactgtg
cggccgtacacggtgcgcgtgggcgacgagaacgacaacgctccgctcttcacgcgaccg
gtctacgaggtgtcggtgcgagagaacaacccgcctggctcctatttggccacggtggcg
gcccgggacccggacctgggccgtaacggccaggtcacctaccggctgctggaggccgag
gtgggccgctccgggggcgcagtgtccacttatgtctcagtggacccggctaccggagcc
atttacgcgctgcgcagcttcgactacgagacgctgcgccagctggacgtgcgcatccag
gctggcgacggcggctcccctcagctctccagcagcgcccttgtgcaagtgcgagtgctg
gaccagaacgaccacgcaccagtcctggtgcacccggcgccggccaacggctccctggaa
gtggcagtccccgggcgcacctcaagggacacagccgtggcgcgcgtgcaggcccgggac
gcggacgaaggcgccaacggggagctggcattcgacctcctgcagcaggagccgcgagaa
gccttcgccataggccgccgcacgggggagatcgtgctcacgggcgacctctcccaggag
ccgccaggccgagtgttccgggctctgttggtcataaccgacggcggccgtcccccgctc
tccaccaccgccaccgtcagcttcgtggtgacagcaggcggtgggcgcgggccggtggcg
cccgccagtgccgggagcccggagcgctctcgcccgccgggctcgcggctcgcggcgtcg
aggcccgggctacaatgggacacgcctctgatcgtcatcatcgtgctggccgggagctgc
acgctgctgctggccgccatcatcgccatcgccaccacctgtaatcgccgcaagaaggag
gtgcgcaaaggggggccccgccgggaagagcggcccggggcggcgggcggcggcgcctcg
gctcctggctccccggaggaggccgcccggggagccgggcccaggcccaacatgttcgac
gtcctcaccttccctggcagcggcaaagcgccctttggcagccccgcggccgacgcgccc
ccgcccgcggtcgcggcggccgaagtgccgggctcggagggcggcagcgccacgggggaa
agctcctgtcacttcgaggggcagcagcgactccgcggcgcgcacgccgagccctacggt
gcctctcccggcttcagaaaggagcctgcgccccctgtggcggtgtggaaaggacactct
ttcaacaccatctctggccgagaagcagagaagttcagcggcaaagatagtggcaaaggg
gacagtgatttcaacgacagcgattccgacatcagcggggacgctctgaaaaaggatctc
atcaaccacatgcagagtggactgtgggcgtgcactgctgagtgtaagatcctgggccac
tctgaccgctgctggagcccgtcgtgcggagggcccaacacgcatccctcgcctcaccca
cctgcccagatgtcgaccttctgcaagagcacgtcactgccacgtgatcctctgcgcagg
gacaattactaccaggcccagctgcccaagacagtggggctgcagagcgtctatgagaaa
gtgctgcacagagactatgacaggacagtcactctgctctcccctcctcgtccaggaagg
ctcccagacttgcaggagatcggggtacccctctaccagtcctcccctggcaggtacctg
tccccaaagaaggaagccaatgaaaatgtgtaa
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