Rhinolophus ferrumequinum (greater horseshoe bat): 117022006
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Entry
117022006 CDS
T07722
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03020
RNA polymerase
rfq03420
Nucleotide excision repair
rfq05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117022006 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
117022006 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
117022006 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfq03021
]
117022006 (POLR2B)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117022006 (POLR2B)
Enzymes [BR:
rfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117022006 (POLR2B)
Transcription machinery [BR:
rfq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117022006 (POLR2B)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117022006 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
117022006
NCBI-ProteinID:
XP_032961433
Ensembl:
ENSRFEG00010004893
UniProt:
A0A671E231
LinkDB
All DBs
Position
5:18692220..18733302
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaggatatgcaatatgatgaggatgatgatgaaatcaccccagat
ttgtggcaagaagcgtgctggattgtaatcagttcctattttgatgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctccacctatcgacctgcaagccgaagctcagcatgctagtggggaagttgaagaa
ccgccacggtatttgctgaagtttgaacagatttacctctccaagcctacccattgggaa
agagatggcgctccttcaccaatgatgccaaatgaggccagattaagaaatctcacgtat
tctgctccactttatgttgatataacaaaaacagtcattaaagaaggggaagaacaactt
cagactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttac
tgcctcttgaatggcttaacagatcgtgatctttgtgagttaaatgaatgccccttggat
cctggtggctatttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattctaaatatgcctacacaggagag
tgtagatcgtgtctggagaattcttcccgacccaccagtactatttgggttagcatgctg
gcaagaggaggacagggtgcaaaaaagagtgctattggtcagcgcattgtggcaactcta
ccatatatcaagcaagaagttcccatcattattgtgttcagagcattaggttttgtgtct
gacagagatattttagagcacattatttatgattttgaagatccagagatgatggaaatg
gttaaaccttctcttgatgaagcttttgtcatccaagaacagaatgttgcactgaatttc
attggttcaagaggagcaaagcctggtgtcactaaagagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgttggtgtcagtgatttttgtgagactaaa
aaggcttatttcttggggtacatggttcataggttgcttctagcagccttgggtagaaga
gaattagatgacagagatcactatggaaacaaaagattggatcttgctgggccactactt
gcattcttatttagaggcatgtttaagaatttgcttaaagaagtgcggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggagctggcaattaaaacaaggattata
tctgatggcctaaaatactctttagctactggaaattggggcgaccaaaaaaaagctcat
caagccagagctggagtatctcaggtattaaaccgcctgacttttgcatctactctttct
cacctgcgtcgtttaaattctcctattggtagagatggcaagctagcaaaaccgagacag
ttgcataatacattgtggggaatggtgtgtcctgctgagacgccagagggccatgctgta
ggactcgtgaagaatttagctttgatggcttatatttcagttggatctcaaccttctcca
attctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatacataaagatcct
gaacaactcatgaatactctaaggaaattgcggcgtcagatggacatcattgtgtctgaa
gtgtctatgatcagagacattcgagaaagggagattcggatctatacagatgcaggccgt
atttgtagaccacttctgattgtggaaaaacaaaagctacttttgaagaagagacatatc
gatcaattaaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtggaatatattgatactctagaggaagaaacagtgatgcttgcaatgactccagat
gatttacaggagaaggaagtagcttattgttccacgtacacacactgcgagattcatcca
tccatgattcttggtgtctgtgcatctattattccctttcctgatcataaccagtcccct
agaaacacataccagtctgctatgggtaagcaggccatgggagtttatatcaccaatttc
catgttcgtatggatacattggcccatgttctctattatcctcaaaaaccacttgtgact
acacggtctatggaatatctacgattcagagagctgccagcgggtatcaactccattgtg
gccattgcttcctacactggatataatcaggaagactctgttatcatgaatcgttcagct
gtagaccggggctttttcaggtctgttttctatcgatcatacaaagaacaggagtctaaa
aaaggatttgatcaagaagaagtttttgagaagcctacacgtgaaacatgccagggtatg
aggcatgccatttatgataagctggatgatgatggtttgatagctcctggggttcgtgta
tcaggagacgatgttatcataggcaaaacagtcactttgcctgaaaatgaagatgaattg
gagagcactaatagacgctataccaagagagactgtagcacttttctcagaactagtgag
acgggcattgtggatcaggtcatggtaactctcaaccaggaaggatacaaattttgtaaa
ataagggtccgctctgttagaattcctcagattggagacaaatttgctagccgacatggt
cagaagggcacctgtggtattcagtatagacaagaggatatgcctttcacctgtgaaggt
atcacccctgatatcatcataaatccccatgccatcccctctcgtatgactattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaacaagggtgaaattggtgatgccacg
ccatttaatgacgctgttaacgtgcagaagatttctaaccttctgtcggattatggctac
cacctccgaggaaacgaggtcctgtataatgggttcactggtagaaaaatcacatcacag
attttcattggccctacctattaccagcgtttgaagcatatggtggatgacaagattcat
tctcgtgctcggggaccgattcagatccttaatagacagcccatggagggtagatctcgt
gatggtggcctgcgttttggagaaatggagcgagactgtcagattgcccacggggcagcc
cagtttttaagggaaagattgtttgaggcatcagatccgtatcaggttcacgtgtgcaat
ctctgtggaatcatggcgatcgctaacaccaggacccatacgtatgaatgcaggggctgc
cgaaataaaactcagatttctttggtgcgaatgccctacgcgtgcaaactgctgtttcag
gaacttatgtctatgagtattgcacctcggatgatgagtgtttag
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integrated database retrieval system
