Rhinolophus ferrumequinum (greater horseshoe bat): 117022013
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Entry
117022013 CDS
T07722
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117022013 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfq03019
]
117022013 (FIP1L1)
Messenger RNA biogenesis [BR:
rfq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117022013 (FIP1L1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117022013
NCBI-ProteinID:
XP_032961450
Ensembl:
ENSRFEG00010003908
UniProt:
A0A671E270
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Position
5:15963724..16026048
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AA seq
603 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEEETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKETTLPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLPGSAPAWPSLVDTSKQWDYYARREKDRDRDRDRDRER
DRDRDRERERTRERERERDHSPTPSVFNSDEERYRYRDYAERGYERHRASREKEERHRER
RHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAT
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagagaatgccagtgctaatcct
ccatctggaattgaagaagaaactgctgaaaacggcgtacctaaaccgaaagtgaccgag
actgaagatgacagtgatagtgacagtgatgatgatgaggatgatgttcatgtcactata
ggagacattaaaacaggagcgcctcagtatgggagttacggtacagcccctgtaaatctt
aacattaagacaggaggaagagtttatggaactacaggaaccaaagtcaaaggggtagac
cttgatgcacctggaagcattaatggagttccactcttggaggtagatttggattctttt
gaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattatgggttt
aatgaagatacgtggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaa
gttataccagttacctctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaattcggagaaagaaacaacgcttccatctacaaaagctgagtttacttctcct
ccttctttgttcaagactggactcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccaattcaagcgttgggaagtggcaggatcgatatggg
agggccgaatcacctgatctaaggagattacctggggcaattgatgttattggtcagact
ataaccatcagtcgagtagaaggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtggacaacaattttagcaaaccacctccgttcttc
cccccgggagctcctcccacccatctgccgccgcctccatttcttccacctcctcccact
gtcagtaccgctccacctctgattccaccaccaggtattccaataactgtaccacctcca
ggttttcctcctccaccaggcgctccacctccatctcttataccaacaatagaaagtgga
cattcttctggttatgatagtcgttctgcacgtgcttttccatatggcaatgttgccttt
ccccaccttcctggttctgctcctgcatggcctagtcttgtggacaccagcaagcaatgg
gactattatgcaagaagagagaaagaccgagatagagatagagacagagaccgagagcga
gatcgtgatcgggacagagaaagagagcgcaccagagagagagagagggagcgtgatcac
agtcctacaccaagtgttttcaacagtgatgaagaacgatacagatatagggattatgca
gaaagaggttatgagcgtcacagagcaagtcgagagaaagaagaacgacatagagaaaga
cgacacagagagaaagaggaaaccagacacaagtcatctcgaagtaatagtagacgtcgc
catgaaagtgaagaaggagacagtcacaggagacacaagcacaaaaaatctaaaagaagc
aaagaaggaaaagaagctggcagtgagcctgcccctgaacaggagagcactgaagctaca
cctgcagaatag
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